EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000008843 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: -
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 28202 bases
Position: chrGL173432.1:221986-250187
Accession: XB-GENE-5789711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000019425	zf-C2H2_jaz	PF12171.8	1.9e-06	1	1
ENSXETP00000019425	G-patch	PF01585.23	3.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000019425	-	4182	-	ENSXETP00000019425	1393 (aa)	-	F6SGQ1

Gene Model

Click here to download ENSXETG00000008843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008843	gpatch8	58	64.777	ENSACLG00000004165	gpatch8	56	69.492	Astatotilapia_calliptera
ENSXETG00000008843	gpatch8	56	63.922	ENSAMXG00000041683	gpatch8	84	51.937	Astyanax_mexicanus
ENSXETG00000008843	gpatch8	53	47.774	ENSEBUG00000005749	gpatch8	69	47.727	Eptatretus_burgeri
ENSXETG00000008843	gpatch8	58	64.777	ENSHBUG00000002669	gpatch8	56	69.492	Haplochromis_burtoni
ENSXETG00000008843	gpatch8	76	62.306	ENSHGLG00100010738	GPATCH8	96	62.134	Heterocephalus_glaber_male
ENSXETG00000008843	gpatch8	54	65.401	ENSIPUG00000015431	gpatch8	79	57.712	Ictalurus_punctatus
ENSXETG00000008843	gpatch8	58	64.777	ENSMZEG00005022584	gpatch8	56	69.492	Maylandia_zebra
ENSXETG00000008843	gpatch8	51	80.392	ENSMLUG00000013840	GPATCH8	53	79.739	Myotis_lucifugus
ENSXETG00000008843	gpatch8	56	64.777	ENSNBRG00000016402	gpatch8	55	69.492	Neolamprologus_brichardi
ENSXETG00000008843	gpatch8	58	64.777	ENSPNYG00000009426	gpatch8	56	69.492	Pundamilia_nyererei
ENSXETG00000008843	gpatch8	51	48.895	ENSSPUG00000011251	GPATCH8	100	52.768	Sphenodon_punctatus
ENSXETG00000008843	gpatch8	57	64.659	ENSTRUG00000020474	gpatch8	56	66.387	Takifugu_rubripes
ENSXETG00000008843	gpatch8	61	66.892	ENSTBEG00000009486	GPATCH8	58	65.552	Tupaia_belangeri