EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000008903 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: -
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 24618 bases
Position: chrGL172736.1:1651406-1676023
Accession: XB-GENE-977105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	1	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	2	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	3	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	4	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	5	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	6	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	7	8
ENSXETP00000019533	PUF	PF00806.19	2.4e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000019533	-	3510	-	ENSXETP00000019533	1169 (aa)	-	F6Z982

Gene Model

Click here to download ENSXETG00000008903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000008903	pum2	100	64.867	ENSXETG00000012904	pum1	99	64.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008903	pum2	90	80.988	ENSG00000055917	PUM2	100	82.857	Homo_sapiens
ENSXETG00000008903	pum2	90	80.780	ENSAMEG00000002823	PUM2	100	80.594	Ailuropoda_melanoleuca
ENSXETG00000008903	pum2	91	83.576	ENSACIG00000010646	pum2	100	86.263	Amphilophus_citrinellus
ENSXETG00000008903	pum2	99	65.913	ENSAOCG00000016619	pum2	98	68.264	Amphiprion_ocellaris
ENSXETG00000008903	pum2	100	67.601	ENSAPEG00000019924	pum2	100	69.744	Amphiprion_percula
ENSXETG00000008903	pum2	100	67.492	ENSATEG00000015030	pum2	100	69.884	Anabas_testudineus
ENSXETG00000008903	pum2	100	79.272	ENSAPLG00000010496	PUM2	100	79.174	Anas_platyrhynchos
ENSXETG00000008903	pum2	90	81.197	ENSACAG00000010491	PUM2	100	81.384	Anolis_carolinensis
ENSXETG00000008903	pum2	90	80.819	ENSANAG00000021807	PUM2	100	80.819	Aotus_nancymaae
ENSXETG00000008903	pum2	100	66.339	ENSACLG00000022532	pum2	100	68.709	Astatotilapia_calliptera
ENSXETG00000008903	pum2	90	80.912	ENSBTAG00000011155	PUM2	100	86.111	Bos_taurus
ENSXETG00000008903	pum2	90	80.912	ENSCJAG00000007450	PUM2	100	80.912	Callithrix_jacchus
ENSXETG00000008903	pum2	90	81.099	ENSCAFG00000003839	PUM2	100	80.912	Canis_familiaris
ENSXETG00000008903	pum2	91	80.224	ENSCAFG00020025689	PUM2	100	79.554	Canis_lupus_dingo
ENSXETG00000008903	pum2	90	81.006	ENSCHIG00000022180	PUM2	100	80.912	Capra_hircus
ENSXETG00000008903	pum2	87	87.582	ENSTSYG00000014463	PUM2	100	80.708	Carlito_syrichta
ENSXETG00000008903	pum2	81	88.235	ENSCAPG00000016888	PUM2	100	88.235	Cavia_aperea
ENSXETG00000008903	pum2	90	80.576	ENSCPOG00000031996	PUM2	100	80.204	Cavia_porcellus
ENSXETG00000008903	pum2	90	80.912	ENSCCAG00000037035	PUM2	100	80.912	Cebus_capucinus
ENSXETG00000008903	pum2	90	80.726	ENSCATG00000043826	PUM2	100	80.912	Cercocebus_atys
ENSXETG00000008903	pum2	90	80.912	ENSCLAG00000006048	PUM2	100	80.633	Chinchilla_lanigera
ENSXETG00000008903	pum2	90	80.726	ENSCSAG00000008087	PUM2	100	80.912	Chlorocebus_sabaeus
ENSXETG00000008903	pum2	64	82.051	ENSCHOG00000004575	PUM2	79	82.051	Choloepus_hoffmanni
ENSXETG00000008903	pum2	90	80.726	ENSCANG00000032797	PUM2	100	80.912	Colobus_angolensis_palliatus
ENSXETG00000008903	pum2	90	81.006	ENSCGRG00001025023	Pum2	100	80.726	Cricetulus_griseus_chok1gshd
ENSXETG00000008903	pum2	90	81.006	ENSCGRG00000001580	Pum2	100	80.726	Cricetulus_griseus_crigri
ENSXETG00000008903	pum2	100	67.596	ENSCSEG00000020899	pum2	100	67.102	Cynoglossus_semilaevis
ENSXETG00000008903	pum2	100	68.242	ENSCVAG00000002426	pum2	100	71.258	Cyprinodon_variegatus
ENSXETG00000008903	pum2	100	67.406	ENSDARG00000061040	pum2	100	68.395	Danio_rerio
ENSXETG00000008903	pum2	91	78.241	ENSDNOG00000006733	PUM2	100	78.148	Dasypus_novemcinctus
ENSXETG00000008903	pum2	90	76.089	ENSDORG00000011453	Pum2	100	75.626	Dipodomys_ordii
ENSXETG00000008903	pum2	73	92.883	ENSETEG00000017683	PUM2	79	92.883	Echinops_telfairi
ENSXETG00000008903	pum2	86	63.209	ENSEBUG00000004435	pum2	96	62.086	Eptatretus_burgeri
ENSXETG00000008903	pum2	63	59.950	ENSEBUG00000014828	pum2	92	60.224	Eptatretus_burgeri
ENSXETG00000008903	pum2	85	92.235	ENSEASG00005009429	PUM2	100	81.006	Equus_asinus_asinus
ENSXETG00000008903	pum2	85	92.235	ENSECAG00000021930	PUM2	100	86.574	Equus_caballus
ENSXETG00000008903	pum2	69	79.630	ENSEEUG00000003224	-	74	79.630	Erinaceus_europaeus
ENSXETG00000008903	pum2	100	66.940	ENSELUG00000014997	pum2	100	68.991	Esox_lucius
ENSXETG00000008903	pum2	90	81.006	ENSFCAG00000027520	PUM2	100	80.819	Felis_catus
ENSXETG00000008903	pum2	90	81.606	ENSFALG00000001759	PUM2	100	81.326	Ficedula_albicollis
ENSXETG00000008903	pum2	90	80.390	ENSFDAG00000019685	PUM2	100	80.204	Fukomys_damarensis
ENSXETG00000008903	pum2	100	64.968	ENSFHEG00000021596	pum2	100	67.530	Fundulus_heteroclitus
ENSXETG00000008903	pum2	90	68.537	ENSGMOG00000006903	pum2	100	70.018	Gadus_morhua
ENSXETG00000008903	pum2	90	81.086	ENSGALG00000016481	PUM2	100	81.273	Gallus_gallus
ENSXETG00000008903	pum2	100	67.851	ENSGAFG00000013691	pum2	100	69.554	Gambusia_affinis
ENSXETG00000008903	pum2	90	69.705	ENSGACG00000009670	pum2	100	71.271	Gasterosteus_aculeatus
ENSXETG00000008903	pum2	100	78.851	ENSGAGG00000020698	PUM2	100	80.952	Gopherus_agassizii
ENSXETG00000008903	pum2	90	80.819	ENSGGOG00000011374	PUM2	100	81.006	Gorilla_gorilla
ENSXETG00000008903	pum2	100	83.898	ENSHBUG00000016453	pum2	100	63.336	Haplochromis_burtoni
ENSXETG00000008903	pum2	90	79.683	ENSHGLG00000007892	PUM2	100	79.590	Heterocephalus_glaber_female
ENSXETG00000008903	pum2	90	79.089	ENSHGLG00100015510	PUM2	100	78.996	Heterocephalus_glaber_male
ENSXETG00000008903	pum2	100	68.623	ENSHCOG00000010119	pum2	100	70.033	Hippocampus_comes
ENSXETG00000008903	pum2	88	87.800	ENSSTOG00000006262	PUM2	100	80.988	Ictidomys_tridecemlineatus
ENSXETG00000008903	pum2	90	80.873	ENSJJAG00000020969	Pum2	100	80.594	Jaculus_jaculus
ENSXETG00000008903	pum2	100	67.298	ENSKMAG00000017216	pum2	100	69.383	Kryptolebias_marmoratus
ENSXETG00000008903	pum2	100	67.547	ENSLBEG00000020488	pum2	100	69.652	Labrus_bergylta
ENSXETG00000008903	pum2	100	77.879	ENSLACG00000008723	PUM2	100	78.542	Latimeria_chalumnae
ENSXETG00000008903	pum2	100	76.763	ENSLOCG00000017196	pum2	100	76.744	Lepisosteus_oculatus
ENSXETG00000008903	pum2	90	80.612	ENSLAFG00000009278	PUM2	100	80.148	Loxodonta_africana
ENSXETG00000008903	pum2	90	80.726	ENSMFAG00000000492	PUM2	100	80.912	Macaca_fascicularis
ENSXETG00000008903	pum2	90	80.726	ENSMMUG00000023181	PUM2	100	80.912	Macaca_mulatta
ENSXETG00000008903	pum2	90	80.726	ENSMNEG00000039659	PUM2	100	80.912	Macaca_nemestrina
ENSXETG00000008903	pum2	90	80.726	ENSMLEG00000039243	PUM2	100	80.912	Mandrillus_leucophaeus
ENSXETG00000008903	pum2	100	67.525	ENSMAMG00000006121	pum2	100	69.760	Mastacembelus_armatus
ENSXETG00000008903	pum2	100	66.448	ENSMZEG00005000791	pum2	100	68.822	Maylandia_zebra
ENSXETG00000008903	pum2	91	82.030	ENSMGAG00000014040	PUM2	100	81.844	Meleagris_gallopavo
ENSXETG00000008903	pum2	90	80.948	ENSMAUG00000000311	Pum2	100	80.669	Mesocricetus_auratus
ENSXETG00000008903	pum2	90	81.192	ENSMICG00000011647	PUM2	100	81.099	Microcebus_murinus
ENSXETG00000008903	pum2	90	80.744	ENSMOCG00000013663	Pum2	100	80.372	Microtus_ochrogaster
ENSXETG00000008903	pum2	90	67.956	ENSMMOG00000002975	pum2	100	71.021	Mola_mola
ENSXETG00000008903	pum2	90	78.189	ENSMODG00000009811	PUM2	100	78.004	Monodelphis_domestica
ENSXETG00000008903	pum2	90	88.509	ENSMALG00000022313	pum2	100	64.074	Monopterus_albus
ENSXETG00000008903	pum2	90	80.354	MGP_CAROLIEiJ_G0017603	Pum2	100	80.236	Mus_caroli
ENSXETG00000008903	pum2	90	80.168	ENSMUSG00000020594	Pum2	100	80.074	Mus_musculus
ENSXETG00000008903	pum2	90	80.819	MGP_PahariEiJ_G0029361	Pum2	100	80.354	Mus_pahari
ENSXETG00000008903	pum2	90	80.261	MGP_SPRETEiJ_G0018447	Pum2	100	80.236	Mus_spretus
ENSXETG00000008903	pum2	90	81.006	ENSMPUG00000013734	PUM2	100	80.819	Mustela_putorius_furo
ENSXETG00000008903	pum2	90	80.819	ENSMLUG00000007362	PUM2	100	80.819	Myotis_lucifugus
ENSXETG00000008903	pum2	90	80.633	ENSNGAG00000016665	-	100	80.540	Nannospalax_galili
ENSXETG00000008903	pum2	90	54.444	ENSNGAG00000016239	-	99	58.698	Nannospalax_galili
ENSXETG00000008903	pum2	80	66.993	ENSNBRG00000020737	pum2	100	56.772	Neolamprologus_brichardi
ENSXETG00000008903	pum2	90	80.912	ENSNLEG00000002509	PUM2	100	80.912	Nomascus_leucogenys
ENSXETG00000008903	pum2	84	77.621	ENSMEUG00000016567	PUM2	93	78.404	Notamacropus_eugenii
ENSXETG00000008903	pum2	63	95.238	ENSOPRG00000001963	PUM2	85	88.000	Ochotona_princeps
ENSXETG00000008903	pum2	90	80.912	ENSODEG00000007823	PUM2	100	80.261	Octodon_degus
ENSXETG00000008903	pum2	100	67.191	ENSONIG00000006119	pum2	100	69.587	Oreochromis_niloticus
ENSXETG00000008903	pum2	90	81.006	ENSOCUG00000017908	PUM2	100	80.540	Oryctolagus_cuniculus
ENSXETG00000008903	pum2	82	88.235	ENSORLG00000012611	pum2	100	67.691	Oryzias_latipes
ENSXETG00000008903	pum2	82	88.235	ENSORLG00020014452	pum2	100	68.522	Oryzias_latipes_hni
ENSXETG00000008903	pum2	100	65.449	ENSORLG00015009427	pum2	100	68.189	Oryzias_latipes_hsok
ENSXETG00000008903	pum2	85	81.092	ENSOMEG00000005889	pum2	100	63.734	Oryzias_melastigma
ENSXETG00000008903	pum2	90	80.540	ENSOARG00000017236	PUM2	100	80.819	Ovis_aries
ENSXETG00000008903	pum2	90	80.819	ENSPPAG00000023095	PUM2	100	81.006	Pan_paniscus
ENSXETG00000008903	pum2	90	81.006	ENSPPRG00000021443	PUM2	100	80.924	Panthera_pardus
ENSXETG00000008903	pum2	90	81.006	ENSPTIG00000018982	PUM2	100	80.819	Panthera_tigris_altaica
ENSXETG00000008903	pum2	90	80.819	ENSPTRG00000011692	PUM2	100	81.006	Pan_troglodytes
ENSXETG00000008903	pum2	90	71.881	ENSPANG00000009393	PUM2	100	94.366	Papio_anubis
ENSXETG00000008903	pum2	100	79.351	ENSPSIG00000011626	PUM2	99	79.385	Pelodiscus_sinensis
ENSXETG00000008903	pum2	90	80.483	ENSPEMG00000008357	Pum2	100	80.204	Peromyscus_maniculatus_bairdii
ENSXETG00000008903	pum2	91	64.227	ENSPMAG00000007038	pum2	100	63.528	Petromyzon_marinus
ENSXETG00000008903	pum2	85	88.941	ENSPCIG00000022139	PUM2	100	77.449	Phascolarctos_cinereus
ENSXETG00000008903	pum2	100	66.613	ENSPFOG00000019208	pum2	100	68.451	Poecilia_formosa
ENSXETG00000008903	pum2	100	67.934	ENSPLAG00000001826	pum2	100	69.810	Poecilia_latipinna
ENSXETG00000008903	pum2	100	67.934	ENSPMEG00000015766	pum2	100	71.680	Poecilia_mexicana
ENSXETG00000008903	pum2	90	66.417	ENSPREG00000006905	pum2	100	65.431	Poecilia_reticulata
ENSXETG00000008903	pum2	90	81.192	ENSPPYG00000012617	PUM2	100	81.099	Pongo_abelii
ENSXETG00000008903	pum2	63	97.826	ENSPCAG00000008001	PUM2	70	97.826	Procavia_capensis
ENSXETG00000008903	pum2	89	80.791	ENSPCOG00000019636	PUM2	100	80.697	Propithecus_coquereli
ENSXETG00000008903	pum2	89	75.520	ENSPVAG00000002920	PUM2	100	75.331	Pteropus_vampyrus
ENSXETG00000008903	pum2	100	66.257	ENSPNYG00000022901	pum2	100	68.627	Pundamilia_nyererei
ENSXETG00000008903	pum2	98	67.349	ENSPNAG00000008025	pum2	99	68.372	Pygocentrus_nattereri
ENSXETG00000008903	pum2	90	79.330	ENSRNOG00000006180	Pum2	100	79.609	Rattus_norvegicus
ENSXETG00000008903	pum2	90	80.726	ENSRBIG00000044880	PUM2	100	81.023	Rhinopithecus_bieti
ENSXETG00000008903	pum2	90	80.837	ENSSBOG00000022007	PUM2	100	80.837	Saimiri_boliviensis_boliviensis
ENSXETG00000008903	pum2	90	77.198	ENSSHAG00000002778	PUM2	100	76.923	Sarcophilus_harrisii
ENSXETG00000008903	pum2	90	74.089	ENSSFOG00015003476	pum2	100	70.805	Scleropages_formosus
ENSXETG00000008903	pum2	100	66.914	ENSSMAG00000018236	pum2	100	69.085	Scophthalmus_maximus
ENSXETG00000008903	pum2	93	68.427	ENSSDUG00000001800	pum2	100	71.325	Seriola_dumerili
ENSXETG00000008903	pum2	100	67.822	ENSSLDG00000000981	pum2	100	69.967	Seriola_lalandi_dorsalis
ENSXETG00000008903	pum2	87	72.562	ENSSARG00000010992	PUM2	86	73.356	Sorex_araneus
ENSXETG00000008903	pum2	89	80.889	ENSSPUG00000017012	PUM2	99	81.079	Sphenodon_punctatus
ENSXETG00000008903	pum2	100	67.436	ENSSPAG00000022948	pum2	100	69.662	Stegastes_partitus
ENSXETG00000008903	pum2	90	81.157	ENSSSCG00000008600	PUM2	100	86.533	Sus_scrofa
ENSXETG00000008903	pum2	90	81.699	ENSTGUG00000013149	PUM2	100	81.419	Taeniopygia_guttata
ENSXETG00000008903	pum2	100	65.359	ENSTRUG00000018167	pum2	100	66.141	Takifugu_rubripes
ENSXETG00000008903	pum2	100	66.446	ENSTNIG00000003116	pum2	100	68.766	Tetraodon_nigroviridis
ENSXETG00000008903	pum2	72	92.683	ENSTBEG00000008729	PUM2	80	92.683	Tupaia_belangeri
ENSXETG00000008903	pum2	90	80.855	ENSTTRG00000004887	PUM2	100	80.762	Tursiops_truncatus
ENSXETG00000008903	pum2	59	92.235	ENSUAMG00000008120	PUM2	97	84.047	Ursus_americanus
ENSXETG00000008903	pum2	90	81.006	ENSUMAG00000023198	PUM2	100	80.819	Ursus_maritimus
ENSXETG00000008903	pum2	90	80.744	ENSVPAG00000005056	PUM2	100	80.651	Vicugna_pacos
ENSXETG00000008903	pum2	90	81.099	ENSVVUG00000014829	PUM2	100	80.912	Vulpes_vulpes
ENSXETG00000008903	pum2	93	69.295	ENSXCOG00000002556	pum2	100	71.577	Xiphophorus_couchianus
ENSXETG00000008903	pum2	100	67.851	ENSXMAG00000017682	pum2	100	69.727	Xiphophorus_maculatus