EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000008936 (Gene tree)
Gene ID: -
Gene Symbol: setdb1
Alias: -
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 21365 bases
Position: chrGL172787.1:2095119-2116483
Accession: XB-GENE-853380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000019584	MBD	PF01429.19	8.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000019584	-	3834	-	ENSXETP00000019584	1277 (aa)	-	F6XVT3

Gene Model

Click here to download ENSXETG00000008936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000008936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000008936	setdb1	99	69.748	ENSG00000143379	SETDB1	99	69.977	Homo_sapiens
ENSXETG00000008936	setdb1	53	71.429	ENSAPOG00000016228	setdb1b	99	72.527	Acanthochromis_polyacanthus
ENSXETG00000008936	setdb1	99	69.598	ENSAMEG00000001160	SETDB1	99	69.400	Ailuropoda_melanoleuca
ENSXETG00000008936	setdb1	88	73.333	ENSACIG00000007359	setdb1b	98	73.889	Amphilophus_citrinellus
ENSXETG00000008936	setdb1	79	72.131	ENSAOCG00000005586	setdb1b	99	72.131	Amphiprion_ocellaris
ENSXETG00000008936	setdb1	89	72.928	ENSATEG00000023520	setdb1b	100	52.858	Anabas_testudineus
ENSXETG00000008936	setdb1	99	70.995	ENSAPLG00000013908	SETDB1	100	70.840	Anas_platyrhynchos
ENSXETG00000008936	setdb1	99	69.618	ENSANAG00000001819	SETDB1	99	69.847	Aotus_nancymaae
ENSXETG00000008936	setdb1	89	73.333	ENSACLG00000020489	setdb1b	99	73.889	Astatotilapia_calliptera
ENSXETG00000008936	setdb1	84	68.159	ENSAMXG00000016168	setdb1b	97	75.862	Astyanax_mexicanus
ENSXETG00000008936	setdb1	50	68.657	ENSAMXG00000010030	setdb1a	62	68.657	Astyanax_mexicanus
ENSXETG00000008936	setdb1	99	69.160	ENSBTAG00000000098	SETDB1	99	69.542	Bos_taurus
ENSXETG00000008936	setdb1	99	69.354	ENSCJAG00000006972	SETDB1	99	69.658	Callithrix_jacchus
ENSXETG00000008936	setdb1	99	69.741	ENSCAFG00000023501	SETDB1	99	71.958	Canis_familiaris
ENSXETG00000008936	setdb1	99	69.764	ENSCAFG00020013596	SETDB1	99	69.840	Canis_lupus_dingo
ENSXETG00000008936	setdb1	99	69.396	ENSCHIG00000010698	SETDB1	99	69.625	Capra_hircus
ENSXETG00000008936	setdb1	81	69.458	ENSTSYG00000012646	SETDB1	99	69.267	Carlito_syrichta
ENSXETG00000008936	setdb1	79	77.510	ENSCAPG00000013619	SETDB1	100	76.984	Cavia_aperea
ENSXETG00000008936	setdb1	99	69.549	ENSCPOG00000001632	SETDB1	99	69.778	Cavia_porcellus
ENSXETG00000008936	setdb1	99	69.635	ENSCCAG00000024882	SETDB1	99	69.939	Cebus_capucinus
ENSXETG00000008936	setdb1	99	67.252	ENSCATG00000044888	SETDB1	99	67.405	Cercocebus_atys
ENSXETG00000008936	setdb1	99	68.968	ENSCLAG00000000242	SETDB1	99	68.816	Chinchilla_lanigera
ENSXETG00000008936	setdb1	88	71.182	ENSCSAG00000018034	SETDB1	100	71.527	Chlorocebus_sabaeus
ENSXETG00000008936	setdb1	99	62.577	ENSCHOG00000004013	SETDB1	99	62.500	Choloepus_hoffmanni
ENSXETG00000008936	setdb1	99	70.748	ENSCPBG00000008716	SETDB1	100	70.477	Chrysemys_picta_bellii
ENSXETG00000008936	setdb1	86	74.159	ENSCANG00000036388	SETDB1	94	74.563	Colobus_angolensis_palliatus
ENSXETG00000008936	setdb1	99	69.113	ENSCGRG00001010822	Setdb1	99	69.113	Cricetulus_griseus_chok1gshd
ENSXETG00000008936	setdb1	99	68.884	ENSCGRG00000005953	Setdb1	99	68.884	Cricetulus_griseus_crigri
ENSXETG00000008936	setdb1	88	71.978	ENSCSEG00000002988	setdb1b	99	71.978	Cynoglossus_semilaevis
ENSXETG00000008936	setdb1	89	72.432	ENSCVAG00000008877	setdb1b	99	72.432	Cyprinodon_variegatus
ENSXETG00000008936	setdb1	87	74.011	ENSDARG00000099021	setdb1b	98	74.011	Danio_rerio
ENSXETG00000008936	setdb1	99	69.552	ENSDNOG00000007754	SETDB1	99	70.008	Dasypus_novemcinctus
ENSXETG00000008936	setdb1	99	67.835	ENSDORG00000006830	Setdb1	99	67.912	Dipodomys_ordii
ENSXETG00000008936	setdb1	70	46.490	ENSEBUG00000005735	setdb1b	95	45.297	Eptatretus_burgeri
ENSXETG00000008936	setdb1	99	69.125	ENSEASG00005002061	SETDB1	99	70.000	Equus_asinus_asinus
ENSXETG00000008936	setdb1	99	69.202	ENSECAG00000023954	SETDB1	99	69.924	Equus_caballus
ENSXETG00000008936	setdb1	83	74.274	ENSEEUG00000015825	SETDB1	82	75.519	Erinaceus_europaeus
ENSXETG00000008936	setdb1	87	77.907	ENSELUG00000013948	setdb1b	97	77.907	Esox_lucius
ENSXETG00000008936	setdb1	60	70.213	ENSELUG00000006204	-	65	70.213	Esox_lucius
ENSXETG00000008936	setdb1	99	68.248	ENSFCAG00000009655	SETDB1	99	68.473	Felis_catus
ENSXETG00000008936	setdb1	99	69.648	ENSFDAG00000021515	SETDB1	99	69.725	Fukomys_damarensis
ENSXETG00000008936	setdb1	89	70.652	ENSFHEG00000022195	setdb1b	99	71.739	Fundulus_heteroclitus
ENSXETG00000008936	setdb1	99	55.288	ENSGMOG00000005993	setdb1b	94	80.982	Gadus_morhua
ENSXETG00000008936	setdb1	99	69.213	ENSGALG00000024051	SETDB1	91	69.555	Gallus_gallus
ENSXETG00000008936	setdb1	83	64.138	ENSGAFG00000012805	setdb1b	98	65.278	Gambusia_affinis
ENSXETG00000008936	setdb1	98	56.455	ENSGACG00000011675	setdb1b	94	77.778	Gasterosteus_aculeatus
ENSXETG00000008936	setdb1	99	70.919	ENSGAGG00000005348	SETDB1	100	70.646	Gopherus_agassizii
ENSXETG00000008936	setdb1	99	69.771	ENSGGOG00000016308	SETDB1	99	70.000	Gorilla_gorilla
ENSXETG00000008936	setdb1	89	73.333	ENSHBUG00000004618	setdb1b	99	73.889	Haplochromis_burtoni
ENSXETG00000008936	setdb1	99	69.237	ENSHGLG00000011098	SETDB1	99	69.466	Heterocephalus_glaber_female
ENSXETG00000008936	setdb1	99	68.578	ENSHGLG00100009789	SETDB1	99	68.807	Heterocephalus_glaber_male
ENSXETG00000008936	setdb1	93	61.570	ENSHCOG00000014567	setdb1b	98	74.725	Hippocampus_comes
ENSXETG00000008936	setdb1	91	69.307	ENSIPUG00000004536	setdb1	98	76.000	Ictalurus_punctatus
ENSXETG00000008936	setdb1	99	68.992	ENSSTOG00000006770	SETDB1	99	68.830	Ictidomys_tridecemlineatus
ENSXETG00000008936	setdb1	88	70.652	ENSKMAG00000001197	setdb1b	91	71.739	Kryptolebias_marmoratus
ENSXETG00000008936	setdb1	89	68.159	ENSLBEG00000025862	setdb1b	97	74.176	Labrus_bergylta
ENSXETG00000008936	setdb1	99	67.800	ENSLACG00000011159	SETDB1	100	67.854	Latimeria_chalumnae
ENSXETG00000008936	setdb1	99	69.377	ENSLAFG00000004006	SETDB1	99	69.605	Loxodonta_africana
ENSXETG00000008936	setdb1	99	69.824	ENSMFAG00000042328	SETDB1	99	69.977	Macaca_fascicularis
ENSXETG00000008936	setdb1	99	69.847	ENSMMUG00000023235	SETDB1	99	69.924	Macaca_mulatta
ENSXETG00000008936	setdb1	99	69.824	ENSMNEG00000017223	SETDB1	99	69.977	Macaca_nemestrina
ENSXETG00000008936	setdb1	99	69.824	ENSMLEG00000033050	SETDB1	99	69.977	Mandrillus_leucophaeus
ENSXETG00000008936	setdb1	90	66.162	ENSMAMG00000015176	setdb1b	85	72.000	Mastacembelus_armatus
ENSXETG00000008936	setdb1	89	73.333	ENSMZEG00005016099	setdb1b	99	73.889	Maylandia_zebra
ENSXETG00000008936	setdb1	87	67.647	ENSMGAG00000001018	SETDB1	97	68.778	Meleagris_gallopavo
ENSXETG00000008936	setdb1	88	71.388	ENSMAUG00000021391	Setdb1	99	71.295	Mesocricetus_auratus
ENSXETG00000008936	setdb1	99	69.476	ENSMICG00000000425	SETDB1	99	69.704	Microcebus_murinus
ENSXETG00000008936	setdb1	99	68.106	ENSMOCG00000017407	Setdb1	99	68.209	Microtus_ochrogaster
ENSXETG00000008936	setdb1	86	67.347	ENSMMOG00000016162	setdb1b	97	70.000	Mola_mola
ENSXETG00000008936	setdb1	99	70.411	ENSMODG00000018821	SETDB1	89	70.442	Monodelphis_domestica
ENSXETG00000008936	setdb1	79	74.233	ENSMALG00000007801	setdb1b	99	75.155	Monopterus_albus
ENSXETG00000008936	setdb1	99	68.674	MGP_CAROLIEiJ_G0025342	Setdb1	99	68.979	Mus_caroli
ENSXETG00000008936	setdb1	99	69.131	ENSMUSG00000015697	Setdb1	99	69.284	Mus_musculus
ENSXETG00000008936	setdb1	99	65.587	ENSMPUG00000004298	SETDB1	99	65.965	Mustela_putorius_furo
ENSXETG00000008936	setdb1	98	69.632	ENSMLUG00000010486	SETDB1	99	69.225	Myotis_lucifugus
ENSXETG00000008936	setdb1	99	67.715	ENSNGAG00000020151	Setdb1	99	68.558	Nannospalax_galili
ENSXETG00000008936	setdb1	92	57.778	ENSNBRG00000003147	setdb1b	99	52.741	Neolamprologus_brichardi
ENSXETG00000008936	setdb1	99	67.144	ENSNLEG00000009996	SETDB1	99	67.295	Nomascus_leucogenys
ENSXETG00000008936	setdb1	98	66.719	ENSMEUG00000000555	-	99	66.332	Notamacropus_eugenii
ENSXETG00000008936	setdb1	86	74.224	ENSMEUG00000006544	-	87	74.629	Notamacropus_eugenii
ENSXETG00000008936	setdb1	97	69.644	ENSOPRG00000015349	SETDB1	99	69.881	Ochotona_princeps
ENSXETG00000008936	setdb1	99	69.916	ENSODEG00000012471	SETDB1	99	69.992	Octodon_degus
ENSXETG00000008936	setdb1	89	73.333	ENSONIG00000006454	setdb1b	99	73.889	Oreochromis_niloticus
ENSXETG00000008936	setdb1	98	70.356	ENSOCUG00000003642	SETDB1	99	70.130	Oryctolagus_cuniculus
ENSXETG00000008936	setdb1	90	71.196	ENSORLG00000010602	setdb1b	99	71.739	Oryzias_latipes
ENSXETG00000008936	setdb1	59	78.979	ENSORLG00020008638	setdb1b	96	59.577	Oryzias_latipes_hni
ENSXETG00000008936	setdb1	90	69.312	ENSORLG00015014543	setdb1b	99	69.841	Oryzias_latipes_hsok
ENSXETG00000008936	setdb1	79	71.038	ENSOMEG00000009457	setdb1b	93	71.585	Oryzias_melastigma
ENSXETG00000008936	setdb1	99	66.667	ENSOGAG00000010320	SETDB1	99	66.819	Otolemur_garnettii
ENSXETG00000008936	setdb1	99	69.207	ENSOARG00000020880	SETDB1	99	69.588	Ovis_aries
ENSXETG00000008936	setdb1	99	69.748	ENSPPAG00000041015	SETDB1	99	69.977	Pan_paniscus
ENSXETG00000008936	setdb1	99	69.336	ENSPPRG00000005462	SETDB1	99	69.635	Panthera_pardus
ENSXETG00000008936	setdb1	99	69.725	ENSPTIG00000014233	SETDB1	99	69.794	Panthera_tigris_altaica
ENSXETG00000008936	setdb1	99	69.672	ENSPTRG00000001267	SETDB1	99	69.901	Pan_troglodytes
ENSXETG00000008936	setdb1	99	67.634	ENSPANG00000020214	SETDB1	99	67.481	Papio_anubis
ENSXETG00000008936	setdb1	57	73.942	ENSPSIG00000008407	SETDB1	85	73.810	Pelodiscus_sinensis
ENSXETG00000008936	setdb1	93	69.643	ENSPEMG00000010553	Setdb1	100	69.544	Peromyscus_maniculatus_bairdii
ENSXETG00000008936	setdb1	98	49.222	ENSPMAG00000001573	setdb1b	91	72.121	Petromyzon_marinus
ENSXETG00000008936	setdb1	84	72.353	ENSPFOG00000004623	-	84	73.529	Poecilia_formosa
ENSXETG00000008936	setdb1	84	73.964	ENSPFOG00000004429	setdb1b	84	75.148	Poecilia_formosa
ENSXETG00000008936	setdb1	89	70.430	ENSPREG00000017459	setdb1b	99	70.879	Poecilia_reticulata
ENSXETG00000008936	setdb1	99	69.672	ENSPPYG00000000887	SETDB1	99	69.824	Pongo_abelii
ENSXETG00000008936	setdb1	85	68.083	ENSPCAG00000002527	SETDB1	99	68.083	Procavia_capensis
ENSXETG00000008936	setdb1	99	69.172	ENSPCOG00000027869	SETDB1	99	69.741	Propithecus_coquereli
ENSXETG00000008936	setdb1	93	70.509	ENSPVAG00000004355	SETDB1	92	70.509	Pteropus_vampyrus
ENSXETG00000008936	setdb1	87	73.333	ENSPNYG00000003997	setdb1b	97	73.889	Pundamilia_nyererei
ENSXETG00000008936	setdb1	89	68.396	ENSPNAG00000021617	setdb1b	98	75.956	Pygocentrus_nattereri
ENSXETG00000008936	setdb1	64	66.429	ENSPNAG00000003444	setdb1a	61	66.429	Pygocentrus_nattereri
ENSXETG00000008936	setdb1	99	68.731	ENSRNOG00000021143	Setdb1	99	68.850	Rattus_norvegicus
ENSXETG00000008936	setdb1	99	69.672	ENSRBIG00000042359	SETDB1	99	69.901	Rhinopithecus_bieti
ENSXETG00000008936	setdb1	99	69.618	ENSRROG00000032628	SETDB1	99	69.847	Rhinopithecus_roxellana
ENSXETG00000008936	setdb1	99	69.278	ENSSBOG00000028608	SETDB1	99	69.658	Saimiri_boliviensis_boliviensis
ENSXETG00000008936	setdb1	99	70.245	ENSSHAG00000012701	SETDB1	99	70.322	Sarcophilus_harrisii
ENSXETG00000008936	setdb1	90	68.720	ENSSFOG00015022183	setdb1	97	73.822	Scleropages_formosus
ENSXETG00000008936	setdb1	87	71.958	ENSSMAG00000015398	setdb1b	98	72.487	Scophthalmus_maximus
ENSXETG00000008936	setdb1	89	73.077	ENSSDUG00000007513	setdb1b	99	73.077	Seriola_dumerili
ENSXETG00000008936	setdb1	89	73.077	ENSSLDG00000015209	setdb1b	99	73.077	Seriola_lalandi_dorsalis
ENSXETG00000008936	setdb1	99	71.030	ENSSPUG00000002969	SETDB1	100	70.895	Sphenodon_punctatus
ENSXETG00000008936	setdb1	98	69.683	ENSSSCG00000006645	SETDB1	100	71.059	Sus_scrofa
ENSXETG00000008936	setdb1	94	67.258	ENSTGUG00000004684	SETDB1	100	67.069	Taeniopygia_guttata
ENSXETG00000008936	setdb1	87	72.283	ENSTRUG00000014641	setdb1b	97	72.826	Takifugu_rubripes
ENSXETG00000008936	setdb1	99	53.532	ENSTNIG00000008065	setdb1b	93	73.481	Tetraodon_nigroviridis
ENSXETG00000008936	setdb1	93	70.714	ENSTBEG00000009306	SETDB1	100	70.550	Tupaia_belangeri
ENSXETG00000008936	setdb1	88	70.825	ENSTTRG00000006966	SETDB1	88	71.120	Tursiops_truncatus
ENSXETG00000008936	setdb1	99	69.545	ENSUAMG00000026724	SETDB1	99	69.962	Ursus_americanus
ENSXETG00000008936	setdb1	99	66.544	ENSUMAG00000003141	SETDB1	99	66.938	Ursus_maritimus
ENSXETG00000008936	setdb1	73	72.973	ENSVPAG00000005440	SETDB1	78	71.158	Vicugna_pacos
ENSXETG00000008936	setdb1	99	69.764	ENSVVUG00000011637	SETDB1	99	69.840	Vulpes_vulpes
ENSXETG00000008936	setdb1	98	55.745	ENSXCOG00000019497	setdb1b	98	55.245	Xiphophorus_couchianus
ENSXETG00000008936	setdb1	89	70.492	ENSXMAG00000016600	setdb1b	98	71.429	Xiphophorus_maculatus