EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000009271 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 13799 bases
Position: chrGL172647.1:240780-254578
Accession: XB-GENE-919947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000032834	RRM_1	PF00076.22	4.4e-56	1	4
ENSXETP00000032834	RRM_1	PF00076.22	4.4e-56	2	4
ENSXETP00000032834	RRM_1	PF00076.22	4.4e-56	3	4
ENSXETP00000032834	RRM_1	PF00076.22	4.4e-56	4	4
ENSXETP00000060542	RRM_1	PF00076.22	3.4e-54	1	4
ENSXETP00000060542	RRM_1	PF00076.22	3.4e-54	2	4
ENSXETP00000060542	RRM_1	PF00076.22	3.4e-54	3	4
ENSXETP00000060542	RRM_1	PF00076.22	3.4e-54	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000032834	-	2490	-	ENSXETP00000032834	829 (aa)	-	F7EFD9
ENSXETT00000062782	-	2331	-	ENSXETP00000060542	776 (aa)	-	F6YF54

Gene Model

Click here to download ENSXETG00000009271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000009271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000009271	rbm28	99	56.371	ENSG00000106344	RBM28	99	67.500	Homo_sapiens
ENSXETG00000009271	rbm28	57	50.109	ENSAPOG00000015512	rbm28	66	48.833	Acanthochromis_polyacanthus
ENSXETG00000009271	rbm28	97	66.667	ENSAMEG00000004776	RBM28	70	66.667	Ailuropoda_melanoleuca
ENSXETG00000009271	rbm28	56	51.044	ENSACIG00000023153	rbm28	91	50.580	Amphilophus_citrinellus
ENSXETG00000009271	rbm28	57	50.545	ENSAOCG00000000462	rbm28	63	49.899	Amphiprion_ocellaris
ENSXETG00000009271	rbm28	57	50.327	ENSAPEG00000012996	rbm28	99	47.539	Amphiprion_percula
ENSXETG00000009271	rbm28	60	47.677	ENSATEG00000001672	rbm28	99	46.683	Anabas_testudineus
ENSXETG00000009271	rbm28	99	54.974	ENSANAG00000033922	RBM28	99	67.500	Aotus_nancymaae
ENSXETG00000009271	rbm28	99	48.936	ENSACLG00000025024	rbm28	99	47.170	Astatotilapia_calliptera
ENSXETG00000009271	rbm28	58	52.222	ENSAMXG00000000763	rbm28	99	53.483	Astyanax_mexicanus
ENSXETG00000009271	rbm28	64	67.500	ENSBTAG00000017001	RBM28	99	67.500	Bos_taurus
ENSXETG00000009271	rbm28	99	54.592	ENSCJAG00000017731	RBM28	99	67.500	Callithrix_jacchus
ENSXETG00000009271	rbm28	99	55.985	ENSCAFG00000001667	RBM28	99	55.985	Canis_familiaris
ENSXETG00000009271	rbm28	99	55.985	ENSCAFG00020021648	RBM28	99	55.985	Canis_lupus_dingo
ENSXETG00000009271	rbm28	88	68.317	ENSCHIG00000014146	RBM28	99	56.868	Capra_hircus
ENSXETG00000009271	rbm28	84	67.488	ENSTSYG00000002892	RBM28	99	65.000	Carlito_syrichta
ENSXETG00000009271	rbm28	71	59.783	ENSCAPG00000013218	RBM28	94	42.536	Cavia_aperea
ENSXETG00000009271	rbm28	99	56.057	ENSCPOG00000006253	RBM28	99	55.969	Cavia_porcellus
ENSXETG00000009271	rbm28	99	54.581	ENSCCAG00000035105	RBM28	99	67.500	Cebus_capucinus
ENSXETG00000009271	rbm28	100	56.154	ENSCATG00000040497	RBM28	100	65.000	Cercocebus_atys
ENSXETG00000009271	rbm28	99	52.753	ENSCLAG00000003707	RBM28	99	51.531	Chinchilla_lanigera
ENSXETG00000009271	rbm28	100	56.226	ENSCSAG00000010161	RBM28	100	56.226	Chlorocebus_sabaeus
ENSXETG00000009271	rbm28	58	62.400	ENSCHOG00000001994	-	63	60.800	Choloepus_hoffmanni
ENSXETG00000009271	rbm28	55	52.766	ENSCPBG00000018088	RBM28	80	57.108	Chrysemys_picta_bellii
ENSXETG00000009271	rbm28	93	56.203	ENSCANG00000038397	RBM28	100	67.500	Colobus_angolensis_palliatus
ENSXETG00000009271	rbm28	64	55.020	ENSCGRG00001021278	Rbm28	99	52.778	Cricetulus_griseus_chok1gshd
ENSXETG00000009271	rbm28	99	54.124	ENSCGRG00000005098	Rbm28	99	54.124	Cricetulus_griseus_crigri
ENSXETG00000009271	rbm28	60	48.898	ENSCSEG00000004212	rbm28	99	47.583	Cynoglossus_semilaevis
ENSXETG00000009271	rbm28	59	53.247	ENSCVAG00000010493	rbm28	99	48.402	Cyprinodon_variegatus
ENSXETG00000009271	rbm28	86	52.516	ENSDARG00000025332	rbm28	80	51.020	Danio_rerio
ENSXETG00000009271	rbm28	100	55.443	ENSDNOG00000001124	RBM28	100	55.598	Dasypus_novemcinctus
ENSXETG00000009271	rbm28	62	54.472	ENSDORG00000004184	Rbm28	95	53.908	Dipodomys_ordii
ENSXETG00000009271	rbm28	99	46.755	ENSETEG00000007130	RBM28	55	53.828	Echinops_telfairi
ENSXETG00000009271	rbm28	82	43.304	ENSEBUG00000004419	rbm28	98	38.768	Eptatretus_burgeri
ENSXETG00000009271	rbm28	94	66.667	ENSEASG00005008528	RBM28	99	55.725	Equus_asinus_asinus
ENSXETG00000009271	rbm28	69	49.567	ENSECAG00000007745	RBM28	99	55.032	Equus_caballus
ENSXETG00000009271	rbm28	99	51.519	ENSEEUG00000002389	RBM28	99	52.503	Erinaceus_europaeus
ENSXETG00000009271	rbm28	99	49.132	ENSELUG00000020602	rbm28	99	49.626	Esox_lucius
ENSXETG00000009271	rbm28	99	56.066	ENSFCAG00000000946	RBM28	99	67.500	Felis_catus
ENSXETG00000009271	rbm28	99	55.355	ENSFDAG00000010169	RBM28	99	55.300	Fukomys_damarensis
ENSXETG00000009271	rbm28	62	50.000	ENSGMOG00000007091	rbm28	66	47.454	Gadus_morhua
ENSXETG00000009271	rbm28	59	53.813	ENSGAFG00000004802	rbm28	96	54.324	Gambusia_affinis
ENSXETG00000009271	rbm28	83	61.000	ENSGACG00000012612	rbm28	92	60.294	Gasterosteus_aculeatus
ENSXETG00000009271	rbm28	84	61.261	ENSGAGG00000008873	RBM28	88	64.251	Gopherus_agassizii
ENSXETG00000009271	rbm28	95	56.309	ENSGGOG00000004644	RBM28	88	66.474	Gorilla_gorilla
ENSXETG00000009271	rbm28	91	50.492	ENSHBUG00000009611	rbm28	94	48.303	Haplochromis_burtoni
ENSXETG00000009271	rbm28	99	55.742	ENSHGLG00000005409	RBM28	99	55.097	Heterocephalus_glaber_female
ENSXETG00000009271	rbm28	99	55.742	ENSHGLG00100016458	RBM28	99	54.710	Heterocephalus_glaber_male
ENSXETG00000009271	rbm28	99	42.066	ENSHCOG00000010597	rbm28	92	50.510	Hippocampus_comes
ENSXETG00000009271	rbm28	67	46.131	ENSIPUG00000007103	rbm28	95	48.148	Ictalurus_punctatus
ENSXETG00000009271	rbm28	99	55.159	ENSSTOG00000002169	RBM28	99	55.045	Ictidomys_tridecemlineatus
ENSXETG00000009271	rbm28	79	66.851	ENSJJAG00000022400	Rbm28	85	66.851	Jaculus_jaculus
ENSXETG00000009271	rbm28	58	50.545	ENSKMAG00000013348	rbm28	63	48.381	Kryptolebias_marmoratus
ENSXETG00000009271	rbm28	59	51.627	ENSLBEG00000012998	rbm28	99	47.450	Labrus_bergylta
ENSXETG00000009271	rbm28	73	51.652	ENSLACG00000010485	-	99	50.865	Latimeria_chalumnae
ENSXETG00000009271	rbm28	99	57.477	ENSLOCG00000015541	rbm28	81	61.856	Lepisosteus_oculatus
ENSXETG00000009271	rbm28	99	55.089	ENSLAFG00000010717	RBM28	63	56.653	Loxodonta_africana
ENSXETG00000009271	rbm28	100	56.410	ENSMFAG00000031036	RBM28	100	65.000	Macaca_fascicularis
ENSXETG00000009271	rbm28	100	56.210	ENSMMUG00000007250	RBM28	100	65.000	Macaca_mulatta
ENSXETG00000009271	rbm28	100	56.178	ENSMNEG00000036970	RBM28	100	65.000	Macaca_nemestrina
ENSXETG00000009271	rbm28	83	54.622	ENSMLEG00000037717	RBM28	100	54.832	Mandrillus_leucophaeus
ENSXETG00000009271	rbm28	100	48.982	ENSMAMG00000008525	rbm28	100	48.923	Mastacembelus_armatus
ENSXETG00000009271	rbm28	93	47.319	ENSMZEG00005019625	rbm28	99	45.340	Maylandia_zebra
ENSXETG00000009271	rbm28	64	54.747	ENSMAUG00000002263	Rbm28	99	53.477	Mesocricetus_auratus
ENSXETG00000009271	rbm28	70	50.943	ENSMICG00000000107	RBM28	99	53.774	Microcebus_murinus
ENSXETG00000009271	rbm28	99	54.650	ENSMOCG00000014615	Rbm28	99	54.744	Microtus_ochrogaster
ENSXETG00000009271	rbm28	57	50.562	ENSMMOG00000008600	rbm28	94	58.413	Mola_mola
ENSXETG00000009271	rbm28	83	65.700	ENSMODG00000015151	RBM28	99	55.823	Monodelphis_domestica
ENSXETG00000009271	rbm28	59	50.976	ENSMALG00000006419	rbm28	63	48.600	Monopterus_albus
ENSXETG00000009271	rbm28	99	54.499	MGP_CAROLIEiJ_G0028162	Rbm28	99	54.337	Mus_caroli
ENSXETG00000009271	rbm28	99	54.892	ENSMUSG00000029701	Rbm28	99	54.835	Mus_musculus
ENSXETG00000009271	rbm28	99	54.662	MGP_PahariEiJ_G0021920	Rbm28	99	54.789	Mus_pahari
ENSXETG00000009271	rbm28	99	54.522	MGP_SPRETEiJ_G0029162	Rbm28	99	54.464	Mus_spretus
ENSXETG00000009271	rbm28	99	55.882	ENSMPUG00000006511	RBM28	99	55.656	Mustela_putorius_furo
ENSXETG00000009271	rbm28	99	55.470	ENSMLUG00000002186	RBM28	99	55.470	Myotis_lucifugus
ENSXETG00000009271	rbm28	99	53.671	ENSNGAG00000006480	-	99	53.173	Nannospalax_galili
ENSXETG00000009271	rbm28	99	52.218	ENSNGAG00000017946	-	99	51.584	Nannospalax_galili
ENSXETG00000009271	rbm28	99	55.698	ENSNLEG00000012307	RBM28	99	67.500	Nomascus_leucogenys
ENSXETG00000009271	rbm28	81	70.440	ENSMEUG00000009611	RBM28	89	70.440	Notamacropus_eugenii
ENSXETG00000009271	rbm28	79	56.410	ENSOPRG00000015140	RBM28	85	54.918	Ochotona_princeps
ENSXETG00000009271	rbm28	99	52.497	ENSODEG00000003213	-	99	52.611	Octodon_degus
ENSXETG00000009271	rbm28	90	49.148	ENSODEG00000013217	-	79	61.214	Octodon_degus
ENSXETG00000009271	rbm28	58	50.743	ENSONIG00000014924	rbm28	99	48.489	Oreochromis_niloticus
ENSXETG00000009271	rbm28	99	54.257	ENSOANG00000000815	-	64	53.815	Ornithorhynchus_anatinus
ENSXETG00000009271	rbm28	99	55.019	ENSOCUG00000003009	RBM28	99	55.019	Oryctolagus_cuniculus
ENSXETG00000009271	rbm28	99	45.096	ENSORLG00000009636	rbm28	65	49.008	Oryzias_latipes
ENSXETG00000009271	rbm28	59	51.522	ENSORLG00020002123	rbm28	66	50.202	Oryzias_latipes_hni
ENSXETG00000009271	rbm28	99	50.000	ENSORLG00015015030	rbm28	99	61.765	Oryzias_latipes_hsok
ENSXETG00000009271	rbm28	59	51.188	ENSOMEG00000007801	rbm28	66	49.609	Oryzias_melastigma
ENSXETG00000009271	rbm28	83	72.500	ENSOGAG00000006011	RBM28	99	72.500	Otolemur_garnettii
ENSXETG00000009271	rbm28	99	56.522	ENSOARG00000002547	RBM28	99	56.555	Ovis_aries
ENSXETG00000009271	rbm28	99	56.226	ENSPPAG00000041730	RBM28	99	67.500	Pan_paniscus
ENSXETG00000009271	rbm28	99	55.939	ENSPPRG00000004420	RBM28	99	67.500	Panthera_pardus
ENSXETG00000009271	rbm28	99	55.954	ENSPTIG00000008550	RBM28	99	67.500	Panthera_tigris_altaica
ENSXETG00000009271	rbm28	99	56.354	ENSPTRG00000019659	RBM28	99	67.500	Pan_troglodytes
ENSXETG00000009271	rbm28	100	55.894	ENSPANG00000022295	RBM28	100	65.000	Papio_anubis
ENSXETG00000009271	rbm28	99	48.221	ENSPKIG00000023453	rbm28	99	48.582	Paramormyrops_kingsleyae
ENSXETG00000009271	rbm28	83	58.654	ENSPMGG00000012840	rbm28	90	61.172	Periophthalmus_magnuspinnatus
ENSXETG00000009271	rbm28	99	51.399	ENSPEMG00000020673	Rbm28	91	66.111	Peromyscus_maniculatus_bairdii
ENSXETG00000009271	rbm28	50	44.656	ENSPMAG00000002948	-	100	47.179	Petromyzon_marinus
ENSXETG00000009271	rbm28	95	49.873	ENSPCIG00000012810	RBM28	99	54.719	Phascolarctos_cinereus
ENSXETG00000009271	rbm28	59	53.362	ENSPFOG00000018209	rbm28	63	50.497	Poecilia_formosa
ENSXETG00000009271	rbm28	57	53.363	ENSPLAG00000016078	rbm28	59	50.833	Poecilia_latipinna
ENSXETG00000009271	rbm28	59	53.145	ENSPMEG00000004292	rbm28	63	50.497	Poecilia_mexicana
ENSXETG00000009271	rbm28	57	52.772	ENSPREG00000014287	rbm28	77	50.511	Poecilia_reticulata
ENSXETG00000009271	rbm28	99	56.645	ENSPPYG00000017975	RBM28	99	56.645	Pongo_abelii
ENSXETG00000009271	rbm28	73	55.191	ENSPCAG00000008223	RBM28	82	55.041	Procavia_capensis
ENSXETG00000009271	rbm28	99	54.741	ENSPCOG00000016797	RBM28	99	67.500	Propithecus_coquereli
ENSXETG00000009271	rbm28	70	67.647	ENSPVAG00000005443	RBM28	71	67.647	Pteropus_vampyrus
ENSXETG00000009271	rbm28	99	48.379	ENSPNYG00000014003	rbm28	99	46.809	Pundamilia_nyererei
ENSXETG00000009271	rbm28	99	54.650	ENSRNOG00000005468	Rbm28	90	64.286	Rattus_norvegicus
ENSXETG00000009271	rbm28	100	54.987	ENSRBIG00000033990	RBM28	100	67.500	Rhinopithecus_bieti
ENSXETG00000009271	rbm28	100	55.442	ENSRROG00000040747	RBM28	100	67.500	Rhinopithecus_roxellana
ENSXETG00000009271	rbm28	89	50.663	ENSSBOG00000012308	RBM28	98	50.663	Saimiri_boliviensis_boliviensis
ENSXETG00000009271	rbm28	95	53.723	ENSSHAG00000017017	RBM28	97	54.717	Sarcophilus_harrisii
ENSXETG00000009271	rbm28	59	49.130	ENSSMAG00000003885	rbm28	98	46.774	Scophthalmus_maximus
ENSXETG00000009271	rbm28	59	51.509	ENSSDUG00000014270	rbm28	95	48.805	Seriola_dumerili
ENSXETG00000009271	rbm28	57	52.434	ENSSLDG00000020099	rbm28	99	46.411	Seriola_lalandi_dorsalis
ENSXETG00000009271	rbm28	76	61.576	ENSSARG00000008303	RBM28	80	61.596	Sorex_araneus
ENSXETG00000009271	rbm28	57	69.796	ENSSPUG00000000838	RBM28	75	69.512	Sphenodon_punctatus
ENSXETG00000009271	rbm28	57	52.484	ENSSPAG00000023305	rbm28	66	49.699	Stegastes_partitus
ENSXETG00000009271	rbm28	99	56.298	ENSSSCG00000031847	RBM28	99	55.442	Sus_scrofa
ENSXETG00000009271	rbm28	59	51.064	ENSTRUG00000013311	rbm28	63	49.016	Takifugu_rubripes
ENSXETG00000009271	rbm28	99	50.253	ENSTNIG00000017962	rbm28	91	64.734	Tetraodon_nigroviridis
ENSXETG00000009271	rbm28	84	55.471	ENSTBEG00000012749	RBM28	83	55.471	Tupaia_belangeri
ENSXETG00000009271	rbm28	57	60.403	ENSTTRG00000013647	RBM28	57	60.268	Tursiops_truncatus
ENSXETG00000009271	rbm28	99	52.057	ENSUAMG00000006949	RBM28	91	65.094	Ursus_americanus
ENSXETG00000009271	rbm28	99	56.298	ENSUMAG00000005997	RBM28	99	55.784	Ursus_maritimus
ENSXETG00000009271	rbm28	85	48.265	ENSVPAG00000008304	RBM28	78	72.727	Vicugna_pacos
ENSXETG00000009271	rbm28	99	56.433	ENSVVUG00000007270	RBM28	99	56.057	Vulpes_vulpes
ENSXETG00000009271	rbm28	58	51.435	ENSXCOG00000020357	rbm28	99	48.665	Xiphophorus_couchianus
ENSXETG00000009271	rbm28	58	53.201	ENSXMAG00000004415	rbm28	99	48.241	Xiphophorus_maculatus