EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000009296 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: -
Full Name: Xenopus tropicalis leucine rich pentatricopeptide repeat containing (lrpprc)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 79088 bases
Position: chrGL172661.1:2033416-2112503
Accession: NM_001045738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000020435	PPR	PF01535.20	3.2e-31	1	5
ENSXETP00000020435	PPR	PF01535.20	3.2e-31	2	5
ENSXETP00000020435	PPR	PF01535.20	3.2e-31	3	5
ENSXETP00000020435	PPR	PF01535.20	3.2e-31	4	5
ENSXETP00000020435	PPR	PF01535.20	3.2e-31	5	5
ENSXETP00000060744	PPR	PF01535.20	3.7e-31	1	5
ENSXETP00000060744	PPR	PF01535.20	3.7e-31	2	5
ENSXETP00000060744	PPR	PF01535.20	3.7e-31	3	5
ENSXETP00000060744	PPR	PF01535.20	3.7e-31	4	5
ENSXETP00000060744	PPR	PF01535.20	3.7e-31	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063441	-	4386	-	ENSXETP00000060744	1411 (aa)	-	F6YDP6
ENSXETT00000020435	-	4326	-	ENSXETP00000020435	1391 (aa)	-	F7E4U1

Gene Model

Click here to download ENSXETG00000009296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000009296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000009296	lrpprc	99	57.337	ENSAPOG00000016610	lrpprc	99	56.552	Acanthochromis_polyacanthus
ENSXETG00000009296	lrpprc	97	60.662	ENSAMEG00000005852	LRPPRC	99	60.333	Ailuropoda_melanoleuca
ENSXETG00000009296	lrpprc	97	54.593	ENSACIG00000009604	lrpprc	94	54.667	Amphilophus_citrinellus
ENSXETG00000009296	lrpprc	99	57.714	ENSAOCG00000005886	lrpprc	97	57.286	Amphiprion_ocellaris
ENSXETG00000009296	lrpprc	99	54.435	ENSAPEG00000002937	lrpprc	99	63.975	Amphiprion_percula
ENSXETG00000009296	lrpprc	92	61.554	ENSATEG00000010555	lrpprc	98	63.778	Anabas_testudineus
ENSXETG00000009296	lrpprc	98	66.935	ENSACAG00000029278	LRPPRC	97	66.862	Anolis_carolinensis
ENSXETG00000009296	lrpprc	99	59.504	ENSANAG00000027440	LRPPRC	99	59.574	Aotus_nancymaae
ENSXETG00000009296	lrpprc	98	54.136	ENSACLG00000023712	lrpprc	92	63.043	Astatotilapia_calliptera
ENSXETG00000009296	lrpprc	99	59.645	ENSCJAG00000000794	LRPPRC	99	59.887	Callithrix_jacchus
ENSXETG00000009296	lrpprc	99	60.274	ENSCHIG00000020173	LRPPRC	99	59.773	Capra_hircus
ENSXETG00000009296	lrpprc	97	47.399	ENSCAPG00000013631	LRPPRC	99	47.399	Cavia_aperea
ENSXETG00000009296	lrpprc	87	59.622	ENSCPOG00000000204	LRPPRC	99	58.964	Cavia_porcellus
ENSXETG00000009296	lrpprc	99	59.333	ENSCCAG00000031900	LRPPRC	99	59.322	Cebus_capucinus
ENSXETG00000009296	lrpprc	99	59.335	ENSCATG00000014187	LRPPRC	99	59.887	Cercocebus_atys
ENSXETG00000009296	lrpprc	99	58.033	ENSCLAG00000005203	LRPPRC	100	58.033	Chinchilla_lanigera
ENSXETG00000009296	lrpprc	99	59.477	ENSCSAG00000013233	LRPPRC	99	59.433	Chlorocebus_sabaeus
ENSXETG00000009296	lrpprc	84	59.101	ENSCHOG00000003631	LRPPRC	84	58.652	Choloepus_hoffmanni
ENSXETG00000009296	lrpprc	97	58.229	ENSCANG00000034961	LRPPRC	99	73.684	Colobus_angolensis_palliatus
ENSXETG00000009296	lrpprc	99	58.007	ENSCGRG00001016261	Lrpprc	99	58.078	Cricetulus_griseus_chok1gshd
ENSXETG00000009296	lrpprc	99	58.007	ENSCGRG00000004072	Lrpprc	99	58.078	Cricetulus_griseus_crigri
ENSXETG00000009296	lrpprc	99	44.739	ENSCSEG00000003850	lrpprc	96	51.927	Cynoglossus_semilaevis
ENSXETG00000009296	lrpprc	96	58.915	ENSCVAG00000012967	lrpprc	94	58.544	Cyprinodon_variegatus
ENSXETG00000009296	lrpprc	99	53.553	ENSDARG00000043970	lrpprc	94	53.410	Danio_rerio
ENSXETG00000009296	lrpprc	79	46.685	ENSDNOG00000032336	-	95	46.412	Dasypus_novemcinctus
ENSXETG00000009296	lrpprc	99	59.590	ENSDNOG00000012594	-	99	59.590	Dasypus_novemcinctus
ENSXETG00000009296	lrpprc	98	60.408	ENSDORG00000012233	Lrpprc	98	60.203	Dipodomys_ordii
ENSXETG00000009296	lrpprc	99	59.040	ENSETEG00000006657	LRPPRC	99	58.640	Echinops_telfairi
ENSXETG00000009296	lrpprc	87	48.367	ENSEEUG00000012340	LRPPRC	93	49.271	Erinaceus_europaeus
ENSXETG00000009296	lrpprc	96	54.911	ENSELUG00000012803	lrpprc	98	54.613	Esox_lucius
ENSXETG00000009296	lrpprc	99	59.901	ENSFCAG00000013468	LRPPRC	99	59.588	Felis_catus
ENSXETG00000009296	lrpprc	97	57.333	ENSFALG00000012738	LRPPRC	99	57.037	Ficedula_albicollis
ENSXETG00000009296	lrpprc	99	57.559	ENSFDAG00000015328	LRPPRC	99	57.630	Fukomys_damarensis
ENSXETG00000009296	lrpprc	99	55.360	ENSFHEG00000019604	lrpprc	99	55.078	Fundulus_heteroclitus
ENSXETG00000009296	lrpprc	99	53.165	ENSGMOG00000008337	lrpprc	99	53.165	Gadus_morhua
ENSXETG00000009296	lrpprc	99	55.893	ENSGAFG00000001455	lrpprc	99	55.681	Gambusia_affinis
ENSXETG00000009296	lrpprc	99	54.552	ENSGACG00000010679	lrpprc	99	56.195	Gasterosteus_aculeatus
ENSXETG00000009296	lrpprc	97	59.027	ENSHBUG00000000393	lrpprc	93	58.954	Haplochromis_burtoni
ENSXETG00000009296	lrpprc	99	58.003	ENSHGLG00000006123	LRPPRC	99	57.720	Heterocephalus_glaber_female
ENSXETG00000009296	lrpprc	60	59.334	ENSHGLG00100005960	-	99	59.334	Heterocephalus_glaber_male
ENSXETG00000009296	lrpprc	97	55.014	ENSHCOG00000002107	lrpprc	100	55.014	Hippocampus_comes
ENSXETG00000009296	lrpprc	99	58.596	ENSIPUG00000009406	lrpprc	96	58.321	Ictalurus_punctatus
ENSXETG00000009296	lrpprc	99	60.185	ENSSTOG00000011185	LRPPRC	99	60.328	Ictidomys_tridecemlineatus
ENSXETG00000009296	lrpprc	99	60.128	ENSJJAG00000020475	Lrpprc	99	60.485	Jaculus_jaculus
ENSXETG00000009296	lrpprc	97	51.149	ENSKMAG00000003287	lrpprc	81	51.149	Kryptolebias_marmoratus
ENSXETG00000009296	lrpprc	99	50.175	ENSLBEG00000023225	lrpprc	96	59.514	Labrus_bergylta
ENSXETG00000009296	lrpprc	99	66.737	ENSLACG00000014030	LRPPRC	99	66.807	Latimeria_chalumnae
ENSXETG00000009296	lrpprc	95	64.859	ENSLOCG00000016390	lrpprc	92	64.859	Lepisosteus_oculatus
ENSXETG00000009296	lrpprc	99	56.728	ENSLAFG00000008614	LRPPRC	99	56.627	Loxodonta_africana
ENSXETG00000009296	lrpprc	99	59.264	ENSMFAG00000041560	LRPPRC	99	78.744	Macaca_fascicularis
ENSXETG00000009296	lrpprc	98	59.154	ENSMMUG00000019841	LRPPRC	99	78.744	Macaca_mulatta
ENSXETG00000009296	lrpprc	99	59.335	ENSMNEG00000031613	LRPPRC	99	59.699	Macaca_nemestrina
ENSXETG00000009296	lrpprc	98	51.667	ENSMAMG00000021835	lrpprc	98	52.014	Mastacembelus_armatus
ENSXETG00000009296	lrpprc	97	59.027	ENSMZEG00005027379	lrpprc	94	58.954	Maylandia_zebra
ENSXETG00000009296	lrpprc	99	59.127	ENSMAUG00000012118	Lrpprc	99	59.317	Mesocricetus_auratus
ENSXETG00000009296	lrpprc	99	60.524	ENSMICG00000010486	LRPPRC	99	60.150	Microcebus_murinus
ENSXETG00000009296	lrpprc	99	59.346	ENSMOCG00000006048	Lrpprc	99	59.346	Microtus_ochrogaster
ENSXETG00000009296	lrpprc	99	55.071	ENSMMOG00000007830	lrpprc	94	64.494	Mola_mola
ENSXETG00000009296	lrpprc	96	61.082	ENSMODG00000000648	LRPPRC	99	60.860	Monodelphis_domestica
ENSXETG00000009296	lrpprc	97	56.139	ENSMALG00000001271	lrpprc	94	55.991	Monopterus_albus
ENSXETG00000009296	lrpprc	98	61.143	ENSMPUG00000011800	LRPPRC	100	61.277	Mustela_putorius_furo
ENSXETG00000009296	lrpprc	99	60.356	ENSMLUG00000010575	LRPPRC	99	60.470	Myotis_lucifugus
ENSXETG00000009296	lrpprc	99	59.532	ENSNGAG00000013069	Lrpprc	99	59.502	Nannospalax_galili
ENSXETG00000009296	lrpprc	96	53.547	ENSNBRG00000013202	lrpprc	99	63.232	Neolamprologus_brichardi
ENSXETG00000009296	lrpprc	99	59.023	ENSNLEG00000016782	LRPPRC	98	59.813	Nomascus_leucogenys
ENSXETG00000009296	lrpprc	88	62.712	ENSOPRG00000016774	LRPPRC	92	55.649	Ochotona_princeps
ENSXETG00000009296	lrpprc	99	59.473	ENSODEG00000011211	LRPPRC	99	59.687	Octodon_degus
ENSXETG00000009296	lrpprc	99	57.610	ENSONIG00000000917	lrpprc	99	57.539	Oreochromis_niloticus
ENSXETG00000009296	lrpprc	74	56.567	ENSOANG00000014670	-	99	56.437	Ornithorhynchus_anatinus
ENSXETG00000009296	lrpprc	99	60.384	ENSOCUG00000015046	LRPPRC	95	60.384	Oryctolagus_cuniculus
ENSXETG00000009296	lrpprc	99	53.107	ENSORLG00000004605	lrpprc	99	53.107	Oryzias_latipes
ENSXETG00000009296	lrpprc	92	57.728	ENSORLG00020012536	lrpprc	99	56.518	Oryzias_latipes_hni
ENSXETG00000009296	lrpprc	95	62.322	ENSORLG00015018270	lrpprc	99	62.322	Oryzias_latipes_hsok
ENSXETG00000009296	lrpprc	99	58.706	ENSOGAG00000012798	LRPPRC	99	58.665	Otolemur_garnettii
ENSXETG00000009296	lrpprc	97	60.940	ENSOARG00000006522	LRPPRC	99	59.972	Ovis_aries
ENSXETG00000009296	lrpprc	99	58.686	ENSPPAG00000040876	LRPPRC	99	59.662	Pan_paniscus
ENSXETG00000009296	lrpprc	99	59.830	ENSPPRG00000006578	LRPPRC	99	59.588	Panthera_pardus
ENSXETG00000009296	lrpprc	97	61.156	ENSPTIG00000000933	LRPPRC	96	60.860	Panthera_tigris_altaica
ENSXETG00000009296	lrpprc	99	59.943	ENSPTRG00000011880	LRPPRC	99	59.774	Pan_troglodytes
ENSXETG00000009296	lrpprc	99	59.023	ENSPANG00000020731	LRPPRC	99	59.699	Papio_anubis
ENSXETG00000009296	lrpprc	97	58.720	ENSPKIG00000022232	lrpprc	98	58.720	Paramormyrops_kingsleyae
ENSXETG00000009296	lrpprc	62	66.359	ENSPSIG00000006830	-	99	65.859	Pelodiscus_sinensis
ENSXETG00000009296	lrpprc	69	46.846	ENSPMGG00000016597	lrpprc	90	52.073	Periophthalmus_magnuspinnatus
ENSXETG00000009296	lrpprc	95	48.981	ENSPMAG00000002147	lrpprc	99	48.904	Petromyzon_marinus
ENSXETG00000009296	lrpprc	98	56.747	ENSPFOG00000011227	lrpprc	99	56.638	Poecilia_formosa
ENSXETG00000009296	lrpprc	99	55.830	ENSPLAG00000004018	lrpprc	99	55.830	Poecilia_latipinna
ENSXETG00000009296	lrpprc	99	55.548	ENSPMEG00000016425	lrpprc	99	55.548	Poecilia_mexicana
ENSXETG00000009296	lrpprc	99	55.336	ENSPREG00000003662	lrpprc	99	55.406	Poecilia_reticulata
ENSXETG00000009296	lrpprc	58	59.136	ENSPPYG00000029532	-	99	59.136	Pongo_abelii
ENSXETG00000009296	lrpprc	82	57.315	ENSPCAG00000001430	LRPPRC	84	57.686	Procavia_capensis
ENSXETG00000009296	lrpprc	99	57.011	ENSPVAG00000002007	LRPPRC	98	57.659	Pteropus_vampyrus
ENSXETG00000009296	lrpprc	99	53.016	ENSPNYG00000000756	lrpprc	100	53.016	Pundamilia_nyererei
ENSXETG00000009296	lrpprc	99	59.081	ENSPNAG00000002895	lrpprc	95	60.382	Pygocentrus_nattereri
ENSXETG00000009296	lrpprc	99	58.861	ENSRNOG00000005877	Lrpprc	99	58.932	Rattus_norvegicus
ENSXETG00000009296	lrpprc	99	57.987	ENSRBIG00000031552	LRPPRC	99	57.939	Rhinopithecus_bieti
ENSXETG00000009296	lrpprc	99	59.120	ENSSBOG00000011807	LRPPRC	99	58.836	Saimiri_boliviensis_boliviensis
ENSXETG00000009296	lrpprc	96	60.223	ENSSHAG00000018725	LRPPRC	99	59.821	Sarcophilus_harrisii
ENSXETG00000009296	lrpprc	99	53.310	ENSSFOG00015001042	lrpprc	95	54.578	Scleropages_formosus
ENSXETG00000009296	lrpprc	96	57.727	ENSSDUG00000019062	lrpprc	94	57.652	Seriola_dumerili
ENSXETG00000009296	lrpprc	99	48.464	ENSSLDG00000023028	lrpprc	98	50.831	Seriola_lalandi_dorsalis
ENSXETG00000009296	lrpprc	93	55.673	ENSSARG00000000426	LRPPRC	99	55.510	Sorex_araneus
ENSXETG00000009296	lrpprc	99	51.454	ENSSPAG00000000162	lrpprc	99	51.177	Stegastes_partitus
ENSXETG00000009296	lrpprc	99	59.204	ENSSSCG00000008452	LRPPRC	99	58.849	Sus_scrofa
ENSXETG00000009296	lrpprc	95	56.349	ENSTGUG00000003759	LRPPRC	99	56.349	Taeniopygia_guttata
ENSXETG00000009296	lrpprc	99	56.240	ENSTRUG00000008409	lrpprc	96	56.163	Takifugu_rubripes
ENSXETG00000009296	lrpprc	99	54.616	ENSTNIG00000007470	lrpprc	99	55.776	Tetraodon_nigroviridis
ENSXETG00000009296	lrpprc	99	57.913	ENSTTRG00000006403	LRPPRC	99	58.078	Tursiops_truncatus
ENSXETG00000009296	lrpprc	97	58.043	ENSVPAG00000008993	LRPPRC	99	57.746	Vicugna_pacos
ENSXETG00000009296	lrpprc	99	51.744	ENSXCOG00000013343	lrpprc	95	57.606	Xiphophorus_couchianus
ENSXETG00000009296	lrpprc	96	57.398	ENSXMAG00000018108	lrpprc	94	57.196	Xiphophorus_maculatus