EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXETG00000009355 (Gene tree)
Gene ID
-
Gene Symbol
smarca4
Alias
-
Full Name
Xenopus tropicalis SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4 (smarca4)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Minus strand
Length
18582 bases
Position
chrGL173755.1:88703-107284
Accession
NM_001113662
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000020620ResIIIPF04851.152e-0911
ENSXETP00000020621ResIIIPF04851.153.8e-0911
ENSXETP00000020620BRKPF07533.167.8e-1811
ENSXETP00000020621BRKPF07533.161.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000020621-4967-ENSXETP000000206211609 (aa)-F7EG83
ENSXETT00000020620-4459-ENSXETP000000206201016 (aa)-A9JRI3
Gene Model
Click here to download ENSXETG00000009355's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000009355's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXETG00000009355smarca49870.754ENSXETG00000015299smarca29670.368
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000009355smarca410086.946ENSG00000127616SMARCA497100.000Homo_sapiens
ENSXETG00000009355smarca49979.921ENSAPOG00000004542SMARCA49981.391Acanthochromis_polyacanthus
ENSXETG00000009355smarca47784.107ENSAPOG00000003509smarca4a9884.264Acanthochromis_polyacanthus
ENSXETG00000009355smarca49987.292ENSAMEG00000010868SMARCA410084.551Ailuropoda_melanoleuca
ENSXETG00000009355smarca49982.788ENSACIG00000021550smarca4a9882.603Amphilophus_citrinellus
ENSXETG00000009355smarca49980.218ENSACIG00000003035-9980.682Amphilophus_citrinellus
ENSXETG00000009355smarca49982.647ENSAOCG00000009450-9783.441Amphiprion_ocellaris
ENSXETG00000009355smarca49981.078ENSAOCG00000019167smarca4a10082.269Amphiprion_ocellaris
ENSXETG00000009355smarca49981.078ENSAPEG00000015559smarca4a10082.337Amphiprion_percula
ENSXETG00000009355smarca49977.998ENSAPEG00000023108-9978.284Amphiprion_percula
ENSXETG00000009355smarca410082.272ENSATEG00000011524smarca4a10083.363Anabas_testudineus
ENSXETG00000009355smarca410079.373ENSATEG00000001094-9979.095Anabas_testudineus
ENSXETG00000009355smarca49987.195ENSANAG00000036991SMARCA410084.991Aotus_nancymaae
ENSXETG00000009355smarca49978.642ENSACLG00000008638-9980.139Astatotilapia_calliptera
ENSXETG00000009355smarca49985.108ENSACLG00000000163smarca4a9883.879Astatotilapia_calliptera
ENSXETG00000009355smarca49982.091ENSAMXG00000011238-9882.425Astyanax_mexicanus
ENSXETG00000009355smarca49979.752ENSAMXG00000021023smarca4a9879.308Astyanax_mexicanus
ENSXETG00000009355smarca49987.685ENSBTAG00000019220SMARCA410086.699Bos_taurus
ENSXETG00000009355smarca49987.195ENSCJAG00000005936SMARCA410084.991Callithrix_jacchus
ENSXETG00000009355smarca49987.488ENSCAFG00000017584SMARCA410086.582Canis_familiaris
ENSXETG00000009355smarca49987.488ENSCAFG00020024620SMARCA49986.582Canis_lupus_dingo
ENSXETG00000009355smarca410083.009ENSCHIG00000015318SMARCA410083.130Capra_hircus
ENSXETG00000009355smarca49987.980ENSTSYG00000012966SMARCA410087.004Carlito_syrichta
ENSXETG00000009355smarca49484.926ENSCAPG00000015932SMARCA49588.702Cavia_aperea
ENSXETG00000009355smarca49987.195ENSCPOG00000015549SMARCA410086.339Cavia_porcellus
ENSXETG00000009355smarca410083.333ENSCCAG00000031660SMARCA49983.816Cebus_capucinus
ENSXETG00000009355smarca49987.292ENSCATG00000029530SMARCA410086.460Cercocebus_atys
ENSXETG00000009355smarca49987.980ENSCLAG00000011946SMARCA410087.065Chinchilla_lanigera
ENSXETG00000009355smarca49987.647ENSCPBG00000009994SMARCA410086.513Chrysemys_picta_bellii
ENSXETG00000009355smarca49987.292ENSCANG00000036013SMARCA410086.400Colobus_angolensis_palliatus
ENSXETG00000009355smarca49987.390ENSCGRG00001016732Smarca410086.521Cricetulus_griseus_chok1gshd
ENSXETG00000009355smarca49987.390ENSCGRG00000017242Smarca410086.521Cricetulus_griseus_crigri
ENSXETG00000009355smarca49781.032ENSCSEG00000014771smarca4a10081.993Cynoglossus_semilaevis
ENSXETG00000009355smarca49981.063ENSCVAG00000006979smarca4a9981.741Cyprinodon_variegatus
ENSXETG00000009355smarca49983.317ENSCVAG00000003018-9882.272Cyprinodon_variegatus
ENSXETG00000009355smarca410082.564ENSDARG00000077226smarca4a10083.164Danio_rerio
ENSXETG00000009355smarca49878.842ENSDARG00000104339SMARCA49680.350Danio_rerio
ENSXETG00000009355smarca49979.333ENSDNOG00000048847SMARCA410080.374Dasypus_novemcinctus
ENSXETG00000009355smarca49980.550ENSDORG00000002544Smarca49380.563Dipodomys_ordii
ENSXETG00000009355smarca49578.571ENSETEG00000013361SMARCA49478.377Echinops_telfairi
ENSXETG00000009355smarca49987.097ENSEASG00005006167SMARCA410084.542Equus_asinus_asinus
ENSXETG00000009355smarca49987.195ENSECAG00000008334SMARCA410086.400Equus_caballus
ENSXETG00000009355smarca410082.512ENSELUG00000010247smarca4a10082.036Esox_lucius
ENSXETG00000009355smarca49975.155ENSELUG00000023232-9775.000Esox_lucius
ENSXETG00000009355smarca410087.007ENSFCAG00000004894SMARCA410086.885Felis_catus
ENSXETG00000009355smarca49483.316ENSFALG00000004208SMARCA49583.923Ficedula_albicollis
ENSXETG00000009355smarca49986.974ENSFDAG00000012237SMARCA49787.227Fukomys_damarensis
ENSXETG00000009355smarca49781.061ENSFHEG00000010182smarca4a10081.834Fundulus_heteroclitus
ENSXETG00000009355smarca49980.588ENSFHEG00000007902-9880.900Fundulus_heteroclitus
ENSXETG00000009355smarca49970.600ENSGMOG00000002649smarca4a9477.381Gadus_morhua
ENSXETG00000009355smarca48984.545ENSGMOG00000005756-9380.087Gadus_morhua
ENSXETG00000009355smarca49987.353ENSGALG00000047145SMARCA410088.380Gallus_gallus
ENSXETG00000009355smarca49082.907ENSGAFG00000014900smarca4a9784.030Gambusia_affinis
ENSXETG00000009355smarca49977.819ENSGAFG00000008827-9877.675Gambusia_affinis
ENSXETG00000009355smarca49781.130ENSGACG00000006691smarca4a10081.355Gasterosteus_aculeatus
ENSXETG00000009355smarca49979.424ENSGACG00000016033-9979.446Gasterosteus_aculeatus
ENSXETG00000009355smarca49987.549ENSGAGG00000016757SMARCA410086.610Gopherus_agassizii
ENSXETG00000009355smarca49987.292ENSGGOG00000009882SMARCA410086.460Gorilla_gorilla
ENSXETG00000009355smarca49985.192ENSHBUG00000021172smarca4a10082.812Haplochromis_burtoni
ENSXETG00000009355smarca49979.232ENSHBUG00000005447-9980.455Haplochromis_burtoni
ENSXETG00000009355smarca410086.946ENSHGLG00000010519SMARCA410086.825Heterocephalus_glaber_female
ENSXETG00000009355smarca49987.195ENSHGLG00100013774SMARCA410085.870Heterocephalus_glaber_male
ENSXETG00000009355smarca49982.981ENSHCOG00000009510smarca4a9783.942Hippocampus_comes
ENSXETG00000009355smarca49879.815ENSIPUG00000016346-9680.605Ictalurus_punctatus
ENSXETG00000009355smarca410082.734ENSIPUG00000006107smarca4a10083.034Ictalurus_punctatus
ENSXETG00000009355smarca49987.390ENSSTOG00000007939SMARCA410086.521Ictidomys_tridecemlineatus
ENSXETG00000009355smarca410086.764ENSJJAG00000012877Smarca410086.885Jaculus_jaculus
ENSXETG00000009355smarca49982.732ENSKMAG00000019518-9883.620Kryptolebias_marmoratus
ENSXETG00000009355smarca49983.597ENSKMAG00000011931smarca4a10082.512Kryptolebias_marmoratus
ENSXETG00000009355smarca49581.930ENSLBEG00000020655-9881.595Labrus_bergylta
ENSXETG00000009355smarca49982.958ENSLBEG00000017383smarca4a9781.477Labrus_bergylta
ENSXETG00000009355smarca48183.433ENSLACG00000015309SMARCA410083.797Latimeria_chalumnae
ENSXETG00000009355smarca410081.592ENSLOCG00000007820smarca4a9982.117Lepisosteus_oculatus
ENSXETG00000009355smarca49987.488ENSLAFG00000001433SMARCA410086.485Loxodonta_africana
ENSXETG00000009355smarca49987.292ENSMFAG00000032146SMARCA49986.460Macaca_fascicularis
ENSXETG00000009355smarca49987.292ENSMMUG00000012042SMARCA410086.460Macaca_mulatta
ENSXETG00000009355smarca49987.267ENSMNEG00000028512SMARCA410086.444Macaca_nemestrina
ENSXETG00000009355smarca49987.292ENSMLEG00000034976SMARCA410086.242Mandrillus_leucophaeus
ENSXETG00000009355smarca49983.317ENSMAMG00000009256smarca4a10082.953Mastacembelus_armatus
ENSXETG00000009355smarca49982.446ENSMAMG00000002841-9883.291Mastacembelus_armatus
ENSXETG00000009355smarca49985.010ENSMZEG00005003889smarca4a10082.523Maylandia_zebra
ENSXETG00000009355smarca49982.006ENSMZEG00005023861-9978.780Maylandia_zebra
ENSXETG00000009355smarca49987.292ENSMAUG00000020731Smarca410086.242Mesocricetus_auratus
ENSXETG00000009355smarca49987.390ENSMICG00000009806SMARCA410086.424Microcebus_murinus
ENSXETG00000009355smarca49987.195ENSMOCG00000022209Smarca410086.242Microtus_ochrogaster
ENSXETG00000009355smarca49982.115ENSMMOG00000007571smarca4a9882.123Mola_mola
ENSXETG00000009355smarca49978.119ENSMMOG00000008466-9878.307Mola_mola
ENSXETG00000009355smarca410087.228ENSMODG00000006287SMARCA410087.228Monodelphis_domestica
ENSXETG00000009355smarca49781.456ENSMALG00000003388smarca4a10082.402Monopterus_albus
ENSXETG00000009355smarca49979.134ENSMALG00000021534-9980.218Monopterus_albus
ENSXETG00000009355smarca49987.292MGP_CAROLIEiJ_G0031879Smarca410089.021Mus_caroli
ENSXETG00000009355smarca49987.292ENSMUSG00000032187Smarca49989.021Mus_musculus
ENSXETG00000009355smarca49987.611MGP_PahariEiJ_G0014745Smarca410089.365Mus_pahari
ENSXETG00000009355smarca49987.292MGP_SPRETEiJ_G0033003Smarca410089.021Mus_spretus
ENSXETG00000009355smarca49987.488ENSMPUG00000005711SMARCA410086.642Mustela_putorius_furo
ENSXETG00000009355smarca49987.195ENSMLUG00000004491-10086.460Myotis_lucifugus
ENSXETG00000009355smarca410086.792ENSNGAG00000021852Smarca410086.792Nannospalax_galili
ENSXETG00000009355smarca49979.331ENSNBRG00000018865-9980.845Neolamprologus_brichardi
ENSXETG00000009355smarca49982.076ENSNBRG00000011457smarca4a9683.216Neolamprologus_brichardi
ENSXETG00000009355smarca49986.413ENSNLEG00000012389SMARCA49683.260Nomascus_leucogenys
ENSXETG00000009355smarca48293.103ENSOPRG00000000885-7993.103Ochotona_princeps
ENSXETG00000009355smarca410085.012ENSODEG00000017127SMARCA410085.357Octodon_degus
ENSXETG00000009355smarca49083.571ENSONIG00000018040-9978.367Oreochromis_niloticus
ENSXETG00000009355smarca49984.631ENSONIG00000008196smarca4a10083.871Oreochromis_niloticus
ENSXETG00000009355smarca49981.594ENSOCUG00000001787SMARCA49980.562Oryctolagus_cuniculus
ENSXETG00000009355smarca48984.022ENSORLG00000003955-9978.869Oryzias_latipes
ENSXETG00000009355smarca49781.086ENSORLG00000015452smarca4a10082.020Oryzias_latipes
ENSXETG00000009355smarca49780.899ENSORLG00020004611smarca4a10082.020Oryzias_latipes_hni
ENSXETG00000009355smarca48983.986ENSORLG00020009728-9978.584Oryzias_latipes_hni
ENSXETG00000009355smarca49976.059ENSORLG00015007739-9978.274Oryzias_latipes_hsok
ENSXETG00000009355smarca49483.921ENSORLG00015016560smarca4a9984.051Oryzias_latipes_hsok
ENSXETG00000009355smarca49084.011ENSOMEG00000016626-9978.703Oryzias_melastigma
ENSXETG00000009355smarca410081.461ENSOMEG00000007486smarca4a10082.611Oryzias_melastigma
ENSXETG00000009355smarca49987.024ENSOGAG00000016148SMARCA410085.840Otolemur_garnettii
ENSXETG00000009355smarca49987.106ENSOARG00000017454SMARCA410086.089Ovis_aries
ENSXETG00000009355smarca49987.292ENSPPAG00000043191SMARCA410086.460Pan_paniscus
ENSXETG00000009355smarca410087.007ENSPPRG00000000064SMARCA410086.885Panthera_pardus
ENSXETG00000009355smarca48186.687ENSPTIG00000017447SMARCA410082.285Panthera_tigris_altaica
ENSXETG00000009355smarca49987.292ENSPTRG00000010488SMARCA410086.460Pan_troglodytes
ENSXETG00000009355smarca49987.463ENSPANG00000011042SMARCA49986.565Papio_anubis
ENSXETG00000009355smarca49983.104ENSPKIG00000010087-10082.246Paramormyrops_kingsleyae
ENSXETG00000009355smarca49982.805ENSPKIG00000007770SMARCA410083.223Paramormyrops_kingsleyae
ENSXETG00000009355smarca410083.333ENSPSIG00000005547SMARCA410083.212Pelodiscus_sinensis
ENSXETG00000009355smarca49987.292ENSPEMG00000020389Smarca410086.303Peromyscus_maniculatus_bairdii
ENSXETG00000009355smarca49988.160ENSPCIG00000017138SMARCA410087.112Phascolarctos_cinereus
ENSXETG00000009355smarca410080.549ENSPFOG00000007892smarca4a10081.418Poecilia_formosa
ENSXETG00000009355smarca49084.032ENSPFOG00000012930-9978.861Poecilia_formosa
ENSXETG00000009355smarca410080.369ENSPLAG00000014294smarca4a10081.418Poecilia_latipinna
ENSXETG00000009355smarca49982.527ENSPLAG00000018616-9882.193Poecilia_latipinna
ENSXETG00000009355smarca49979.420ENSPMEG00000008929-9879.828Poecilia_mexicana
ENSXETG00000009355smarca49979.659ENSPMEG00000003725smarca4a9682.821Poecilia_mexicana
ENSXETG00000009355smarca49980.012ENSPREG00000014608smarca4a10081.402Poecilia_reticulata
ENSXETG00000009355smarca49977.547ENSPREG00000014823-9780.296Poecilia_reticulata
ENSXETG00000009355smarca410086.885ENSPPYG00000009568SMARCA410086.703Pongo_abelii
ENSXETG00000009355smarca49973.803ENSPCAG00000014054SMARCA47580.153Procavia_capensis
ENSXETG00000009355smarca49987.292ENSPCOG00000023011SMARCA410086.364Propithecus_coquereli
ENSXETG00000009355smarca49584.557ENSPVAG00000007787SMARCA49684.369Pteropus_vampyrus
ENSXETG00000009355smarca49983.044ENSPNYG00000000717smarca4a9683.744Pundamilia_nyererei
ENSXETG00000009355smarca49979.327ENSPNYG00000023995-9980.429Pundamilia_nyererei
ENSXETG00000009355smarca49981.950ENSPNAG00000006636-9879.866Pygocentrus_nattereri
ENSXETG00000009355smarca49978.474ENSPNAG00000024136smarca4a9781.371Pygocentrus_nattereri
ENSXETG00000009355smarca49987.390ENSRNOG00000009271Smarca410086.460Rattus_norvegicus
ENSXETG00000009355smarca49987.292ENSRBIG00000038696SMARCA49986.400Rhinopithecus_bieti
ENSXETG00000009355smarca49987.292ENSRROG00000045509SMARCA410086.400Rhinopithecus_roxellana
ENSXETG00000009355smarca49987.292ENSSBOG00000026896SMARCA49886.683Saimiri_boliviensis_boliviensis
ENSXETG00000009355smarca49988.063ENSSHAG00000001642SMARCA410087.112Sarcophilus_harrisii
ENSXETG00000009355smarca49984.069ENSSFOG00015013823smarca410083.413Scleropages_formosus
ENSXETG00000009355smarca49677.681ENSSFOG00015009921-9979.683Scleropages_formosus
ENSXETG00000009355smarca49984.320ENSSMAG00000003200smarca4a10082.424Scophthalmus_maximus
ENSXETG00000009355smarca410077.469ENSSMAG00000014082-9976.772Scophthalmus_maximus
ENSXETG00000009355smarca49983.531ENSSDUG00000017298smarca4a10079.406Seriola_dumerili
ENSXETG00000009355smarca49981.016ENSSDUG00000005388-9979.027Seriola_dumerili
ENSXETG00000009355smarca410082.194ENSSLDG00000024486smarca4a10082.893Seriola_lalandi_dorsalis
ENSXETG00000009355smarca49983.465ENSSLDG00000023663-9881.408Seriola_lalandi_dorsalis
ENSXETG00000009355smarca46398.137ENSSARG00000013477SMARCA48198.137Sorex_araneus
ENSXETG00000009355smarca49984.020ENSSPUG00000004558SMARCA49884.601Sphenodon_punctatus
ENSXETG00000009355smarca410082.494ENSSPAG00000004248smarca4a10082.713Stegastes_partitus
ENSXETG00000009355smarca49981.009ENSSPAG00000012533-9780.724Stegastes_partitus
ENSXETG00000009355smarca49987.390ENSSSCG00000013629SMARCA410086.424Sus_scrofa
ENSXETG00000009355smarca45591.473ENSTGUG00000015488-9984.670Taeniopygia_guttata
ENSXETG00000009355smarca49978.592ENSTRUG00000004885smarca4a10078.552Takifugu_rubripes
ENSXETG00000009355smarca49976.321ENSTRUG00000001378SMARCA49878.607Takifugu_rubripes
ENSXETG00000009355smarca410079.042ENSTNIG00000004536SMARCA49980.269Tetraodon_nigroviridis
ENSXETG00000009355smarca48782.327ENSTNIG00000004859-10082.677Tetraodon_nigroviridis
ENSXETG00000009355smarca45998.649ENSTBEG00000000707-5298.571Tupaia_belangeri
ENSXETG00000009355smarca49987.169ENSTTRG00000009519SMARCA410085.645Tursiops_truncatus
ENSXETG00000009355smarca49987.488ENSUAMG00000014661SMARCA410086.642Ursus_americanus
ENSXETG00000009355smarca49982.347ENSUMAG00000022005SMARCA49886.975Ursus_maritimus
ENSXETG00000009355smarca49987.488ENSVVUG00000017820SMARCA49786.642Vulpes_vulpes
ENSXETG00000009355smarca49980.415ENSXCOG00000013494-9880.595Xiphophorus_couchianus
ENSXETG00000009355smarca410080.767ENSXMAG00000006321smarca4a10081.769Xiphophorus_maculatus
ENSXETG00000009355smarca49983.570ENSXMAG00000007030-9880.346Xiphophorus_maculatus

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