EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000009641 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: -
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 7741 bases
Position: chrGL173092.1:817657-825397
Accession: XB-GENE-992761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000021229	Met_10	PF02475.16	3.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000021229	-	1440	XM_002939211	ENSXETP00000021229	417 (aa)	XP_002939257	F7AMM4

Gene Model

Click here to download ENSXETG00000009641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000009641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000009641	trmt12	98	54.773	ENSG00000183665	TRMT12	95	63.415	Homo_sapiens
ENSXETG00000009641	trmt12	95	53.133	ENSAPOG00000011979	trmt12	99	53.133	Acanthochromis_polyacanthus
ENSXETG00000009641	trmt12	100	54.688	ENSAMEG00000019612	TRMT12	99	54.688	Ailuropoda_melanoleuca
ENSXETG00000009641	trmt12	91	53.003	ENSACIG00000012982	trmt12	99	53.003	Amphilophus_citrinellus
ENSXETG00000009641	trmt12	95	52.130	ENSAOCG00000020570	trmt12	98	53.704	Amphiprion_ocellaris
ENSXETG00000009641	trmt12	95	52.381	ENSAPEG00000006335	trmt12	98	53.968	Amphiprion_percula
ENSXETG00000009641	trmt12	95	51.861	ENSATEG00000018316	trmt12	99	51.861	Anabas_testudineus
ENSXETG00000009641	trmt12	95	52.130	ENSACLG00000001008	trmt12	99	52.130	Astatotilapia_calliptera
ENSXETG00000009641	trmt12	96	49.048	ENSAMXG00000040366	trmt12	99	49.048	Astyanax_mexicanus
ENSXETG00000009641	trmt12	99	55.204	ENSBTAG00000020398	TRMT12	95	55.204	Bos_taurus
ENSXETG00000009641	trmt12	57	36.975	WBGene00009586	F40F9.10	51	36.975	Caenorhabditis_elegans
ENSXETG00000009641	trmt12	98	54.318	ENSCJAG00000022174	TRMT12	98	54.318	Callithrix_jacchus
ENSXETG00000009641	trmt12	97	56.193	ENSCAFG00000001040	TRMT12	99	56.193	Canis_familiaris
ENSXETG00000009641	trmt12	97	56.193	ENSCAFG00020006500	TRMT12	99	56.193	Canis_lupus_dingo
ENSXETG00000009641	trmt12	94	56.028	ENSCHIG00000016574	TRMT12	96	56.028	Capra_hircus
ENSXETG00000009641	trmt12	96	57.611	ENSCPOG00000026520	TRMT12	96	57.611	Cavia_porcellus
ENSXETG00000009641	trmt12	98	55.227	ENSCSAG00000018615	TRMT12	98	55.227	Chlorocebus_sabaeus
ENSXETG00000009641	trmt12	98	53.084	ENSCPBG00000014290	TRMT12	99	53.084	Chrysemys_picta_bellii
ENSXETG00000009641	trmt12	67	50.172	ENSCING00000019633	-	97	50.172	Ciona_intestinalis
ENSXETG00000009641	trmt12	69	50.690	ENSCSAVG00000000415	-	93	50.690	Ciona_savignyi
ENSXETG00000009641	trmt12	95	55.961	ENSCGRG00001014834	Trmt12	97	55.990	Cricetulus_griseus_chok1gshd
ENSXETG00000009641	trmt12	95	51.843	ENSCSEG00000002675	trmt12	94	51.843	Cynoglossus_semilaevis
ENSXETG00000009641	trmt12	95	49.000	ENSCVAG00000005590	trmt12	99	49.500	Cyprinodon_variegatus
ENSXETG00000009641	trmt12	95	49.755	ENSDARG00000060338	trmt12	99	51.590	Danio_rerio
ENSXETG00000009641	trmt12	98	53.288	ENSETEG00000009373	TRMT12	98	53.288	Echinops_telfairi
ENSXETG00000009641	trmt12	96	56.047	ENSEASG00005022441	TRMT12	97	56.047	Equus_asinus_asinus
ENSXETG00000009641	trmt12	98	55.479	ENSEEUG00000004844	TRMT12	98	55.479	Erinaceus_europaeus
ENSXETG00000009641	trmt12	95	51.852	ENSELUG00000004240	trmt12	99	53.457	Esox_lucius
ENSXETG00000009641	trmt12	62	59.717	ENSFALG00000003825	TRMT12	92	71.287	Ficedula_albicollis
ENSXETG00000009641	trmt12	98	54.091	ENSFDAG00000016647	TRMT12	99	54.091	Fukomys_damarensis
ENSXETG00000009641	trmt12	89	42.857	ENSFHEG00000017338	trmt12	96	42.857	Fundulus_heteroclitus
ENSXETG00000009641	trmt12	78	57.507	ENSGALG00000006773	TRMT12	77	57.507	Gallus_gallus
ENSXETG00000009641	trmt12	95	50.125	ENSGAFG00000020056	trmt12	99	50.125	Gambusia_affinis
ENSXETG00000009641	trmt12	92	52.742	ENSGACG00000017351	trmt12	100	52.742	Gasterosteus_aculeatus
ENSXETG00000009641	trmt12	95	53.563	ENSGAGG00000006032	TRMT12	98	53.563	Gopherus_agassizii
ENSXETG00000009641	trmt12	95	51.880	ENSHBUG00000016412	trmt12	99	51.880	Haplochromis_burtoni
ENSXETG00000009641	trmt12	98	55.251	ENSHGLG00000020498	TRMT12	99	55.251	Heterocephalus_glaber_female
ENSXETG00000009641	trmt12	98	55.708	ENSHGLG00100020132	TRMT12	99	55.708	Heterocephalus_glaber_male
ENSXETG00000009641	trmt12	95	50.746	ENSHCOG00000005050	trmt12	96	55.891	Hippocampus_comes
ENSXETG00000009641	trmt12	95	47.561	ENSIPUG00000018011	trmt12	91	47.561	Ictalurus_punctatus
ENSXETG00000009641	trmt12	97	55.046	ENSSTOG00000030617	TRMT12	98	55.046	Ictidomys_tridecemlineatus
ENSXETG00000009641	trmt12	95	52.882	ENSKMAG00000000891	trmt12	99	52.882	Kryptolebias_marmoratus
ENSXETG00000009641	trmt12	95	50.000	ENSLBEG00000028712	trmt12	99	50.000	Labrus_bergylta
ENSXETG00000009641	trmt12	50	61.290	ENSLBEG00000017456	-	88	61.290	Labrus_bergylta
ENSXETG00000009641	trmt12	97	51.591	ENSLACG00000015869	TRMT12	98	51.591	Latimeria_chalumnae
ENSXETG00000009641	trmt12	96	52.267	ENSLOCG00000015290	trmt12	99	52.267	Lepisosteus_oculatus
ENSXETG00000009641	trmt12	96	56.512	ENSLAFG00000012519	TRMT12	97	56.512	Loxodonta_africana
ENSXETG00000009641	trmt12	98	55.479	ENSMMUG00000015490	TRMT12	98	55.479	Macaca_mulatta
ENSXETG00000009641	trmt12	95	51.613	ENSMAMG00000020311	trmt12	99	51.613	Mastacembelus_armatus
ENSXETG00000009641	trmt12	95	52.130	ENSMZEG00005007349	trmt12	99	52.130	Maylandia_zebra
ENSXETG00000009641	trmt12	95	56.706	ENSMGAG00000004174	TRMT12	95	56.706	Meleagris_gallopavo
ENSXETG00000009641	trmt12	95	50.990	ENSMMOG00000000412	trmt12	99	50.990	Mola_mola
ENSXETG00000009641	trmt12	98	55.896	ENSMODG00000021403	-	97	55.896	Monodelphis_domestica
ENSXETG00000009641	trmt12	97	56.057	ENSMODG00000011798	-	88	56.057	Monodelphis_domestica
ENSXETG00000009641	trmt12	95	51.365	ENSMALG00000008668	trmt12	99	51.365	Monopterus_albus
ENSXETG00000009641	trmt12	96	57.674	MGP_CAROLIEiJ_G0019820	Trmt12	96	57.674	Mus_caroli
ENSXETG00000009641	trmt12	96	57.009	ENSMUSG00000037085	Trmt12	96	57.009	Mus_musculus
ENSXETG00000009641	trmt12	96	58.275	MGP_PahariEiJ_G0019829	Trmt12	96	58.275	Mus_pahari
ENSXETG00000009641	trmt12	96	56.776	MGP_SPRETEiJ_G0020717	Trmt12	96	56.776	Mus_spretus
ENSXETG00000009641	trmt12	100	54.241	ENSMPUG00000019150	TRMT12	99	54.241	Mustela_putorius_furo
ENSXETG00000009641	trmt12	98	55.000	ENSMLUG00000003753	TRMT12	99	55.000	Myotis_lucifugus
ENSXETG00000009641	trmt12	95	57.243	ENSNGAG00000014548	Trmt12	97	57.243	Nannospalax_galili
ENSXETG00000009641	trmt12	95	52.750	ENSNBRG00000021510	trmt12	99	52.750	Neolamprologus_brichardi
ENSXETG00000009641	trmt12	96	51.981	ENSOPRG00000008067	TRMT12	96	51.981	Ochotona_princeps
ENSXETG00000009641	trmt12	98	56.591	ENSODEG00000018933	TRMT12	99	56.591	Octodon_degus
ENSXETG00000009641	trmt12	95	51.880	ENSONIG00000002614	trmt12	99	51.880	Oreochromis_niloticus
ENSXETG00000009641	trmt12	97	55.478	ENSOANG00000009987	TRMT12	99	55.478	Ornithorhynchus_anatinus
ENSXETG00000009641	trmt12	80	62.985	ENSOCUG00000026379	TRMT12	74	62.985	Oryctolagus_cuniculus
ENSXETG00000009641	trmt12	95	52.632	ENSORLG00000001280	trmt12	99	53.133	Oryzias_latipes
ENSXETG00000009641	trmt12	95	52.381	ENSORLG00020000708	trmt12	99	52.882	Oryzias_latipes_hni
ENSXETG00000009641	trmt12	95	52.381	ENSORLG00015012344	trmt12	99	53.133	Oryzias_latipes_hsok
ENSXETG00000009641	trmt12	95	52.645	ENSOMEG00000015267	trmt12	97	52.645	Oryzias_melastigma
ENSXETG00000009641	trmt12	97	54.128	ENSOGAG00000015845	TRMT12	99	54.128	Otolemur_garnettii
ENSXETG00000009641	trmt12	95	54.591	ENSPKIG00000004640	trmt12	99	54.591	Paramormyrops_kingsleyae
ENSXETG00000009641	trmt12	55	57.037	ENSPSIG00000003476	TRMT12	99	57.037	Pelodiscus_sinensis
ENSXETG00000009641	trmt12	95	48.166	ENSPMGG00000016356	trmt12	97	48.166	Periophthalmus_magnuspinnatus
ENSXETG00000009641	trmt12	98	56.132	ENSPCIG00000002967	TRMT12	89	56.132	Phascolarctos_cinereus
ENSXETG00000009641	trmt12	96	50.123	ENSPFOG00000016931	trmt12	99	50.123	Poecilia_formosa
ENSXETG00000009641	trmt12	95	51.000	ENSPLAG00000020621	trmt12	99	51.000	Poecilia_latipinna
ENSXETG00000009641	trmt12	95	51.000	ENSPMEG00000000818	trmt12	99	51.000	Poecilia_mexicana
ENSXETG00000009641	trmt12	95	50.500	ENSPREG00000011621	trmt12	99	50.500	Poecilia_reticulata
ENSXETG00000009641	trmt12	98	54.773	ENSPPYG00000018866	TRMT12	98	54.773	Pongo_abelii
ENSXETG00000009641	trmt12	98	56.136	ENSPCAG00000000556	TRMT12	98	56.136	Procavia_capensis
ENSXETG00000009641	trmt12	98	55.227	ENSPVAG00000009149	TRMT12	98	55.227	Pteropus_vampyrus
ENSXETG00000009641	trmt12	91	53.141	ENSPNYG00000010696	trmt12	99	53.141	Pundamilia_nyererei
ENSXETG00000009641	trmt12	95	50.119	ENSPNAG00000019028	trmt12	99	50.119	Pygocentrus_nattereri
ENSXETG00000009641	trmt12	96	58.508	ENSRNOG00000008978	Trmt12	98	58.508	Rattus_norvegicus
ENSXETG00000009641	trmt12	56	31.439	YML005W	TRM12	54	31.439	Saccharomyces_cerevisiae
ENSXETG00000009641	trmt12	95	55.314	ENSSHAG00000003345	TRMT12	94	55.314	Sarcophilus_harrisii
ENSXETG00000009641	trmt12	95	52.530	ENSSFOG00015006090	trmt12	99	52.530	Scleropages_formosus
ENSXETG00000009641	trmt12	95	52.228	ENSSMAG00000013247	trmt12	99	52.228	Scophthalmus_maximus
ENSXETG00000009641	trmt12	95	52.357	ENSSDUG00000006168	trmt12	99	52.357	Seriola_dumerili
ENSXETG00000009641	trmt12	95	52.109	ENSSLDG00000025007	trmt12	99	52.109	Seriola_lalandi_dorsalis
ENSXETG00000009641	trmt12	98	53.125	ENSSPUG00000005321	TRMT12	98	53.125	Sphenodon_punctatus
ENSXETG00000009641	trmt12	95	51.128	ENSSPAG00000009435	trmt12	96	51.128	Stegastes_partitus
ENSXETG00000009641	trmt12	95	54.009	ENSTGUG00000002280	TRMT12	99	54.632	Taeniopygia_guttata
ENSXETG00000009641	trmt12	95	49.751	ENSTRUG00000011548	trmt12	98	49.751	Takifugu_rubripes
ENSXETG00000009641	trmt12	93	49.370	ENSTNIG00000016866	trmt12	96	49.370	Tetraodon_nigroviridis
ENSXETG00000009641	trmt12	98	55.023	ENSUAMG00000002067	TRMT12	99	55.023	Ursus_americanus
ENSXETG00000009641	trmt12	98	55.455	ENSVPAG00000006519	TRMT12	98	55.455	Vicugna_pacos
ENSXETG00000009641	trmt12	95	56.103	ENSVVUG00000016790	TRMT12	95	56.103	Vulpes_vulpes
ENSXETG00000009641	trmt12	95	50.374	ENSXCOG00000016505	trmt12	99	50.374	Xiphophorus_couchianus
ENSXETG00000009641	trmt12	95	49.875	ENSXMAG00000025318	trmt12	99	49.875	Xiphophorus_maculatus