EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000009682 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: -
Full Name: Xenopus tropicalis splicing factor proline and glutamine rich (sfpq)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 15386 bases
Position: chrGL173047.1:658232-673617
Accession: NM_001127955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000021326	RRM_1	PF00076.22	2.5e-30	1	2
ENSXETP00000021326	RRM_1	PF00076.22	2.5e-30	2	2
ENSXETP00000015440	RRM_1	PF00076.22	1.5e-29	1	2
ENSXETP00000015440	RRM_1	PF00076.22	1.5e-29	2	2
ENSXETP00000059975	RRM_1	PF00076.22	5.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000021326	-	1743	-	ENSXETP00000021326	363 (aa)	-	F6X6Q0
ENSXETT00000062825	-	1733	-	ENSXETP00000059975	320 (aa)	-	F7DKX5
ENSXETT00000015440	-	2579	-	ENSXETP00000015440	653 (aa)	-	F7BKE4

Gene Model

Click here to download ENSXETG00000009682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000009682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000009682	sfpq	97	67.139	ENSXETG00000020868	nono	78	60.260

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000009682	sfpq	100	85.139	ENSG00000116560	SFPQ	97	84.259	Homo_sapiens
ENSXETG00000009682	sfpq	100	73.602	ENSAPOG00000024257	sfpq	66	66.949	Acanthochromis_polyacanthus
ENSXETG00000009682	sfpq	100	85.139	ENSAMEG00000000815	SFPQ	100	82.287	Ailuropoda_melanoleuca
ENSXETG00000009682	sfpq	94	79.310	ENSACIG00000000905	sfpq	72	67.574	Amphilophus_citrinellus
ENSXETG00000009682	sfpq	100	73.913	ENSAOCG00000002889	sfpq	58	72.292	Amphiprion_ocellaris
ENSXETG00000009682	sfpq	100	73.913	ENSAPEG00000016556	sfpq	58	72.292	Amphiprion_percula
ENSXETG00000009682	sfpq	100	77.399	ENSATEG00000002981	sfpq	70	68.670	Anabas_testudineus
ENSXETG00000009682	sfpq	95	58.900	ENSANAG00000021268	-	100	58.543	Aotus_nancymaae
ENSXETG00000009682	sfpq	94	66.885	ENSANAG00000037798	-	94	62.952	Aotus_nancymaae
ENSXETG00000009682	sfpq	100	75.389	ENSANAG00000027438	-	67	68.468	Aotus_nancymaae
ENSXETG00000009682	sfpq	98	78.652	ENSACLG00000022332	sfpq	65	69.249	Astatotilapia_calliptera
ENSXETG00000009682	sfpq	94	79.942	ENSAMXG00000011538	sfpq	65	68.304	Astyanax_mexicanus
ENSXETG00000009682	sfpq	100	85.139	ENSBTAG00000016328	SFPQ	64	80.172	Bos_taurus
ENSXETG00000009682	sfpq	74	49.071	WBGene00017778	nono-1	67	48.606	Caenorhabditis_elegans
ENSXETG00000009682	sfpq	100	85.139	ENSCJAG00000001431	SFPQ	64	80.172	Callithrix_jacchus
ENSXETG00000009682	sfpq	100	85.139	ENSCAFG00000003595	-	69	80.172	Canis_familiaris
ENSXETG00000009682	sfpq	100	78.947	ENSCAFG00000017608	-	66	74.009	Canis_familiaris
ENSXETG00000009682	sfpq	100	82.353	ENSCAFG00000018271	-	68	74.839	Canis_familiaris
ENSXETG00000009682	sfpq	95	78.689	ENSCAFG00020010702	-	100	75.000	Canis_lupus_dingo
ENSXETG00000009682	sfpq	100	82.353	ENSCAFG00020004881	-	69	74.840	Canis_lupus_dingo
ENSXETG00000009682	sfpq	100	85.139	ENSCHIG00000023097	SFPQ	64	80.172	Capra_hircus
ENSXETG00000009682	sfpq	95	73.856	ENSTSYG00000035106	-	98	69.492	Carlito_syrichta
ENSXETG00000009682	sfpq	95	85.294	ENSTSYG00000037120	-	100	82.633	Carlito_syrichta
ENSXETG00000009682	sfpq	95	75.163	ENSCPOG00000015018	-	100	72.629	Cavia_porcellus
ENSXETG00000009682	sfpq	100	85.139	ENSCCAG00000029361	-	64	80.172	Cebus_capucinus
ENSXETG00000009682	sfpq	92	86.567	ENSCATG00000036179	-	50	85.303	Cercocebus_atys
ENSXETG00000009682	sfpq	95	85.294	ENSCLAG00000009583	-	100	82.633	Chinchilla_lanigera
ENSXETG00000009682	sfpq	92	87.458	ENSCHOG00000009131	SFPQ	100	80.311	Choloepus_hoffmanni
ENSXETG00000009682	sfpq	100	86.239	ENSCPBG00000018674	SFPQ	71	79.281	Chrysemys_picta_bellii
ENSXETG00000009682	sfpq	95	85.294	ENSCANG00000028087	-	100	82.633	Colobus_angolensis_palliatus
ENSXETG00000009682	sfpq	100	84.830	ENSCGRG00001011698	Sfpq	65	79.957	Cricetulus_griseus_chok1gshd
ENSXETG00000009682	sfpq	100	84.830	ENSCGRG00000010128	Sfpq	95	82.838	Cricetulus_griseus_crigri
ENSXETG00000009682	sfpq	98	78.310	ENSCSEG00000007852	sfpq	67	68.527	Cynoglossus_semilaevis
ENSXETG00000009682	sfpq	98	73.596	ENSCVAG00000019538	sfpq	64	64.186	Cyprinodon_variegatus
ENSXETG00000009682	sfpq	93	80.769	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSXETG00000009682	sfpq	100	85.139	ENSDNOG00000049454	SFPQ	64	80.172	Dasypus_novemcinctus
ENSXETG00000009682	sfpq	100	85.139	ENSDORG00000008109	Sfpq	65	80.172	Dipodomys_ordii
ENSXETG00000009682	sfpq	100	75.851	ENSETEG00000001095	SFPQ	61	76.201	Echinops_telfairi
ENSXETG00000009682	sfpq	100	85.139	ENSEASG00005012012	SFPQ	64	80.172	Equus_asinus_asinus
ENSXETG00000009682	sfpq	100	85.139	ENSECAG00000000642	SFPQ	64	80.172	Equus_caballus
ENSXETG00000009682	sfpq	92	82.440	ENSELUG00000023145	sfpq	74	66.122	Esox_lucius
ENSXETG00000009682	sfpq	100	85.139	ENSFCAG00000042862	SFPQ	65	80.172	Felis_catus
ENSXETG00000009682	sfpq	95	86.275	ENSFALG00000000731	SFPQ	100	82.353	Ficedula_albicollis
ENSXETG00000009682	sfpq	95	74.510	ENSFDAG00000017723	-	100	74.095	Fukomys_damarensis
ENSXETG00000009682	sfpq	98	73.315	ENSFHEG00000015200	sfpq	78	55.246	Fundulus_heteroclitus
ENSXETG00000009682	sfpq	94	81.159	ENSGMOG00000011950	SFPQ	74	70.481	Gadus_morhua
ENSXETG00000009682	sfpq	92	80.357	ENSGMOG00000011957	sfpq	71	65.319	Gadus_morhua
ENSXETG00000009682	sfpq	100	86.068	ENSGALG00000002514	SFPQ	67	82.727	Gallus_gallus
ENSXETG00000009682	sfpq	96	74.571	ENSGAFG00000014571	sfpq	57	77.301	Gambusia_affinis
ENSXETG00000009682	sfpq	97	78.977	ENSGACG00000002034	sfpq	72	67.457	Gasterosteus_aculeatus
ENSXETG00000009682	sfpq	100	85.139	ENSGGOG00000026354	SFPQ	100	82.633	Gorilla_gorilla
ENSXETG00000009682	sfpq	98	78.652	ENSHBUG00000016818	sfpq	65	69.249	Haplochromis_burtoni
ENSXETG00000009682	sfpq	100	84.356	ENSHGLG00000012001	SFPQ	66	79.657	Heterocephalus_glaber_female
ENSXETG00000009682	sfpq	95	85.294	ENSHGLG00100004136	-	100	82.633	Heterocephalus_glaber_male
ENSXETG00000009682	sfpq	99	77.287	ENSHCOG00000008612	sfpq	61	75.964	Hippocampus_comes
ENSXETG00000009682	sfpq	97	77.841	ENSIPUG00000013076	SFPQ	74	69.524	Ictalurus_punctatus
ENSXETG00000009682	sfpq	95	85.294	ENSSTOG00000014004	-	100	82.633	Ictidomys_tridecemlineatus
ENSXETG00000009682	sfpq	100	85.139	ENSJJAG00000015633	Sfpq	65	80.172	Jaculus_jaculus
ENSXETG00000009682	sfpq	97	81.534	ENSLBEG00000003163	sfpq	56	74.257	Labrus_bergylta
ENSXETG00000009682	sfpq	98	79.944	ENSLACG00000014728	SFPQ	94	62.162	Latimeria_chalumnae
ENSXETG00000009682	sfpq	94	86.337	ENSLOCG00000001067	sfpq	68	78.608	Lepisosteus_oculatus
ENSXETG00000009682	sfpq	100	85.139	ENSLAFG00000015951	SFPQ	72	80.172	Loxodonta_africana
ENSXETG00000009682	sfpq	95	82.026	ENSMLEG00000010643	-	100	79.832	Mandrillus_leucophaeus
ENSXETG00000009682	sfpq	87	76.868	ENSMLEG00000035352	-	99	75.301	Mandrillus_leucophaeus
ENSXETG00000009682	sfpq	100	78.638	ENSMAMG00000007875	sfpq	65	74.874	Mastacembelus_armatus
ENSXETG00000009682	sfpq	98	78.652	ENSMZEG00005026091	sfpq	68	66.876	Maylandia_zebra
ENSXETG00000009682	sfpq	100	86.068	ENSMGAG00000004237	SFPQ	100	80.353	Meleagris_gallopavo
ENSXETG00000009682	sfpq	100	84.520	ENSMAUG00000006402	Sfpq	65	79.741	Mesocricetus_auratus
ENSXETG00000009682	sfpq	100	85.139	ENSMICG00000027265	SFPQ	65	80.172	Microcebus_murinus
ENSXETG00000009682	sfpq	100	80.805	ENSMOCG00000019075	Sfpq	95	76.989	Microtus_ochrogaster
ENSXETG00000009682	sfpq	100	76.087	ENSMMOG00000001074	sfpq	65	71.034	Mola_mola
ENSXETG00000009682	sfpq	100	86.025	ENSMODG00000017937	SFPQ	69	78.647	Monodelphis_domestica
ENSXETG00000009682	sfpq	100	76.324	ENSMALG00000010381	sfpq	59	80.415	Monopterus_albus
ENSXETG00000009682	sfpq	100	84.830	MGP_CAROLIEiJ_G0026487	Sfpq	65	79.957	Mus_caroli
ENSXETG00000009682	sfpq	100	84.830	ENSMUSG00000028820	Sfpq	65	79.957	Mus_musculus
ENSXETG00000009682	sfpq	100	84.830	MGP_PahariEiJ_G0028818	Sfpq	65	79.957	Mus_pahari
ENSXETG00000009682	sfpq	100	84.830	MGP_SPRETEiJ_G0027466	Sfpq	65	79.957	Mus_spretus
ENSXETG00000009682	sfpq	95	84.967	ENSMPUG00000014931	-	98	85.948	Mustela_putorius_furo
ENSXETG00000009682	sfpq	100	84.830	ENSMLUG00000027090	SFPQ	98	81.982	Myotis_lucifugus
ENSXETG00000009682	sfpq	100	84.830	ENSNGAG00000000888	Sfpq	65	79.957	Nannospalax_galili
ENSXETG00000009682	sfpq	99	78.552	ENSNBRG00000017479	sfpq	68	67.296	Neolamprologus_brichardi
ENSXETG00000009682	sfpq	95	85.294	ENSNLEG00000035521	-	100	82.633	Nomascus_leucogenys
ENSXETG00000009682	sfpq	100	86.293	ENSMEUG00000014082	SFPQ	63	81.982	Notamacropus_eugenii
ENSXETG00000009682	sfpq	100	85.139	ENSOPRG00000013696	SFPQ	67	78.079	Ochotona_princeps
ENSXETG00000009682	sfpq	100	72.360	ENSODEG00000005485	SFPQ	80	70.387	Octodon_degus
ENSXETG00000009682	sfpq	98	78.371	ENSONIG00000017737	sfpq	68	65.833	Oreochromis_niloticus
ENSXETG00000009682	sfpq	95	84.590	ENSOANG00000008789	-	100	81.742	Ornithorhynchus_anatinus
ENSXETG00000009682	sfpq	100	85.139	ENSOCUG00000001877	SFPQ	88	80.963	Oryctolagus_cuniculus
ENSXETG00000009682	sfpq	98	76.901	ENSORLG00000007459	sfpq	65	65.577	Oryzias_latipes
ENSXETG00000009682	sfpq	98	76.901	ENSORLG00020011818	sfpq	67	63.419	Oryzias_latipes_hni
ENSXETG00000009682	sfpq	98	76.901	ENSORLG00015002131	sfpq	76	58.627	Oryzias_latipes_hsok
ENSXETG00000009682	sfpq	98	76.338	ENSOMEG00000018020	sfpq	50	74.366	Oryzias_melastigma
ENSXETG00000009682	sfpq	100	86.378	ENSOGAG00000027710	SFPQ	86	80.388	Otolemur_garnettii
ENSXETG00000009682	sfpq	100	85.139	ENSOARG00000019439	SFPQ	66	83.066	Ovis_aries
ENSXETG00000009682	sfpq	100	85.139	ENSPPAG00000030078	SFPQ	64	80.172	Pan_paniscus
ENSXETG00000009682	sfpq	95	85.016	ENSPPRG00000015478	-	100	82.402	Panthera_pardus
ENSXETG00000009682	sfpq	95	85.294	ENSPTIG00000007710	-	100	82.633	Panthera_tigris_altaica
ENSXETG00000009682	sfpq	100	76.780	ENSPTRG00000000518	SFPQ	63	74.353	Pan_troglodytes
ENSXETG00000009682	sfpq	100	85.139	ENSPANG00000005380	SFPQ	68	80.172	Papio_anubis
ENSXETG00000009682	sfpq	92	84.132	ENSPKIG00000023035	sfpq	78	70.127	Paramormyrops_kingsleyae
ENSXETG00000009682	sfpq	100	86.997	ENSPSIG00000011494	SFPQ	100	83.982	Pelodiscus_sinensis
ENSXETG00000009682	sfpq	89	80.495	ENSPMGG00000023883	sfpq	58	79.567	Periophthalmus_magnuspinnatus
ENSXETG00000009682	sfpq	100	84.830	ENSPEMG00000009794	Sfpq	94	79.570	Peromyscus_maniculatus_bairdii
ENSXETG00000009682	sfpq	88	73.354	ENSPMAG00000005583	sfpq	72	70.294	Petromyzon_marinus
ENSXETG00000009682	sfpq	100	86.293	ENSPCIG00000000923	SFPQ	67	78.814	Phascolarctos_cinereus
ENSXETG00000009682	sfpq	96	74.359	ENSPFOG00000003127	sfpq	71	66.895	Poecilia_formosa
ENSXETG00000009682	sfpq	96	74.074	ENSPREG00000008060	sfpq	60	65.919	Poecilia_reticulata
ENSXETG00000009682	sfpq	100	85.139	ENSPPYG00000001560	SFPQ	64	80.172	Pongo_abelii
ENSXETG00000009682	sfpq	100	84.049	ENSPCAG00000006164	SFPQ	60	82.529	Procavia_capensis
ENSXETG00000009682	sfpq	100	85.139	ENSPCOG00000027127	SFPQ	65	80.172	Propithecus_coquereli
ENSXETG00000009682	sfpq	99	82.445	ENSPVAG00000001865	SFPQ	65	77.802	Pteropus_vampyrus
ENSXETG00000009682	sfpq	92	82.635	ENSPNYG00000007494	sfpq	67	66.946	Pundamilia_nyererei
ENSXETG00000009682	sfpq	93	81.121	ENSPNAG00000002128	sfpq	75	67.457	Pygocentrus_nattereri
ENSXETG00000009682	sfpq	100	84.830	ENSRNOG00000058461	Sfpq	66	79.957	Rattus_norvegicus
ENSXETG00000009682	sfpq	100	85.139	ENSRBIG00000035286	SFPQ	100	82.633	Rhinopithecus_bieti
ENSXETG00000009682	sfpq	100	85.139	ENSRROG00000040992	SFPQ	100	82.633	Rhinopithecus_roxellana
ENSXETG00000009682	sfpq	91	65.870	ENSSBOG00000033925	-	94	60.123	Saimiri_boliviensis_boliviensis
ENSXETG00000009682	sfpq	95	85.294	ENSSBOG00000024972	-	100	82.633	Saimiri_boliviensis_boliviensis
ENSXETG00000009682	sfpq	100	86.293	ENSSHAG00000016107	-	97	79.029	Sarcophilus_harrisii
ENSXETG00000009682	sfpq	95	82.237	ENSSHAG00000012312	-	100	75.775	Sarcophilus_harrisii
ENSXETG00000009682	sfpq	100	78.019	ENSSFOG00015009289	sfpq	80	70.460	Scleropages_formosus
ENSXETG00000009682	sfpq	100	77.778	ENSSMAG00000018201	sfpq	68	70.769	Scophthalmus_maximus
ENSXETG00000009682	sfpq	100	78.882	ENSSDUG00000008402	sfpq	66	73.363	Seriola_dumerili
ENSXETG00000009682	sfpq	100	78.882	ENSSLDG00000018917	sfpq	65	75.123	Seriola_lalandi_dorsalis
ENSXETG00000009682	sfpq	100	85.139	ENSSARG00000006409	SFPQ	100	82.888	Sorex_araneus
ENSXETG00000009682	sfpq	94	81.395	ENSSPAG00000016550	sfpq	66	70.588	Stegastes_partitus
ENSXETG00000009682	sfpq	100	85.139	ENSSSCG00000035690	SFPQ	65	80.172	Sus_scrofa
ENSXETG00000009682	sfpq	100	86.068	ENSTGUG00000001722	SFPQ	100	82.609	Taeniopygia_guttata
ENSXETG00000009682	sfpq	100	75.155	ENSTRUG00000003783	sfpq	57	77.159	Takifugu_rubripes
ENSXETG00000009682	sfpq	100	77.709	ENSTNIG00000011331	sfpq	71	71.882	Tetraodon_nigroviridis
ENSXETG00000009682	sfpq	100	82.663	ENSTTRG00000013930	SFPQ	65	77.802	Tursiops_truncatus
ENSXETG00000009682	sfpq	55	87.562	ENSUAMG00000026758	SFPQ	79	81.057	Ursus_americanus
ENSXETG00000009682	sfpq	95	82.353	ENSUMAG00000008056	-	100	80.112	Ursus_maritimus
ENSXETG00000009682	sfpq	100	74.303	ENSVPAG00000006960	-	62	73.430	Vicugna_pacos
ENSXETG00000009682	sfpq	92	78.041	ENSVVUG00000000874	-	100	73.389	Vulpes_vulpes
ENSXETG00000009682	sfpq	92	76.946	ENSXMAG00000016391	sfpq	56	69.452	Xiphophorus_maculatus