EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000009899 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 43600 bases
Position: chrGL173010.1:902666-946265
Accession: XB-GENE-956330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000021802	Exo_endo_phos	PF03372.23	2e-15	1	1
ENSXETP00000021802	DUF1866	PF08952.11	7.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000021802	-	4776	-	ENSXETP00000021802	1591 (aa)	-	F6ZWT4

Gene Model

Click here to download ENSXETG00000009899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000009899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000009899	synj1	68	52.500	ENSXETG00000034066	synj2	66	53.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000009899	synj1	100	68.727	ENSG00000159082	SYNJ1	100	85.028	Homo_sapiens
ENSXETG00000009899	synj1	69	73.713	ENSAPOG00000002809	synj1	96	66.617	Acanthochromis_polyacanthus
ENSXETG00000009899	synj1	100	69.616	ENSAMEG00000015028	SYNJ1	98	69.802	Ailuropoda_melanoleuca
ENSXETG00000009899	synj1	99	56.102	ENSACIG00000008857	synj1	94	65.079	Amphilophus_citrinellus
ENSXETG00000009899	synj1	84	63.857	ENSAOCG00000009835	synj1	95	66.493	Amphiprion_ocellaris
ENSXETG00000009899	synj1	69	73.261	ENSAPEG00000021010	synj1	90	59.196	Amphiprion_percula
ENSXETG00000009899	synj1	69	73.532	ENSATEG00000002306	synj1	87	61.039	Anabas_testudineus
ENSXETG00000009899	synj1	100	69.740	ENSAPLG00000011832	SYNJ1	100	70.668	Anas_platyrhynchos
ENSXETG00000009899	synj1	84	75.880	ENSACAG00000003006	-	100	76.105	Anolis_carolinensis
ENSXETG00000009899	synj1	100	68.134	ENSANAG00000027325	SYNJ1	100	77.562	Aotus_nancymaae
ENSXETG00000009899	synj1	84	64.209	ENSACLG00000002255	synj1	96	65.702	Astatotilapia_calliptera
ENSXETG00000009899	synj1	69	74.141	ENSAMXG00000008208	synj1	100	57.509	Astyanax_mexicanus
ENSXETG00000009899	synj1	95	72.031	ENSBTAG00000003063	SYNJ1	100	78.300	Bos_taurus
ENSXETG00000009899	synj1	100	67.234	ENSCJAG00000009187	SYNJ1	100	77.562	Callithrix_jacchus
ENSXETG00000009899	synj1	100	69.098	ENSCAFG00000009041	SYNJ1	99	74.196	Canis_familiaris
ENSXETG00000009899	synj1	100	65.780	ENSCAFG00020025776	SYNJ1	98	73.858	Canis_lupus_dingo
ENSXETG00000009899	synj1	95	70.332	ENSCHIG00000005095	SYNJ1	100	66.543	Capra_hircus
ENSXETG00000009899	synj1	95	71.270	ENSTSYG00000014541	SYNJ1	100	76.180	Carlito_syrichta
ENSXETG00000009899	synj1	93	64.770	ENSCAPG00000014483	SYNJ1	99	67.301	Cavia_aperea
ENSXETG00000009899	synj1	98	68.474	ENSCPOG00000012182	SYNJ1	100	76.889	Cavia_porcellus
ENSXETG00000009899	synj1	84	76.036	ENSCCAG00000020825	SYNJ1	100	77.487	Cebus_capucinus
ENSXETG00000009899	synj1	93	83.077	ENSCATG00000033891	SYNJ1	100	77.711	Cercocebus_atys
ENSXETG00000009899	synj1	98	69.912	ENSCLAG00000009796	SYNJ1	100	84.986	Chinchilla_lanigera
ENSXETG00000009899	synj1	84	77.038	ENSCSAG00000009654	SYNJ1	100	78.102	Chlorocebus_sabaeus
ENSXETG00000009899	synj1	77	81.935	ENSCHOG00000012390	SYNJ1	84	81.935	Choloepus_hoffmanni
ENSXETG00000009899	synj1	79	79.124	ENSCPBG00000006402	SYNJ1	97	78.503	Chrysemys_picta_bellii
ENSXETG00000009899	synj1	100	68.916	ENSCANG00000031359	SYNJ1	100	77.562	Colobus_angolensis_palliatus
ENSXETG00000009899	synj1	100	68.614	ENSCGRG00001010861	Synj1	100	77.978	Cricetulus_griseus_chok1gshd
ENSXETG00000009899	synj1	84	77.753	ENSCGRG00000015749	Synj1	100	84.844	Cricetulus_griseus_crigri
ENSXETG00000009899	synj1	69	73.622	ENSCSEG00000019614	synj1	99	65.768	Cynoglossus_semilaevis
ENSXETG00000009899	synj1	69	72.198	ENSCVAG00000019250	synj1	95	65.507	Cyprinodon_variegatus
ENSXETG00000009899	synj1	69	75.634	ENSDARG00000025011	synj1	95	68.095	Danio_rerio
ENSXETG00000009899	synj1	91	71.888	ENSDNOG00000010732	SYNJ1	99	67.968	Dasypus_novemcinctus
ENSXETG00000009899	synj1	72	82.906	ENSETEG00000018674	SYNJ1	73	82.906	Echinops_telfairi
ENSXETG00000009899	synj1	100	66.646	ENSEASG00005006287	SYNJ1	98	83.110	Equus_asinus_asinus
ENSXETG00000009899	synj1	100	68.661	ENSECAG00000004829	SYNJ1	100	74.925	Equus_caballus
ENSXETG00000009899	synj1	88	75.786	ENSEEUG00000005150	SYNJ1	95	75.786	Erinaceus_europaeus
ENSXETG00000009899	synj1	91	59.073	ENSELUG00000009731	synj1	81	70.053	Esox_lucius
ENSXETG00000009899	synj1	100	64.431	ENSFCAG00000012498	SYNJ1	100	77.263	Felis_catus
ENSXETG00000009899	synj1	79	63.352	ENSFALG00000004680	SYNJ1	100	63.035	Ficedula_albicollis
ENSXETG00000009899	synj1	84	77.004	ENSFDAG00000016818	SYNJ1	100	84.986	Fukomys_damarensis
ENSXETG00000009899	synj1	86	62.561	ENSFHEG00000017689	synj1	96	58.090	Fundulus_heteroclitus
ENSXETG00000009899	synj1	64	70.217	ENSGMOG00000014852	synj1	77	69.981	Gadus_morhua
ENSXETG00000009899	synj1	85	63.408	ENSGAFG00000019466	synj1	96	58.462	Gambusia_affinis
ENSXETG00000009899	synj1	69	69.106	ENSGACG00000020575	synj1	93	62.805	Gasterosteus_aculeatus
ENSXETG00000009899	synj1	100	68.878	ENSGAGG00000022523	SYNJ1	100	76.492	Gopherus_agassizii
ENSXETG00000009899	synj1	100	68.333	ENSGGOG00000015945	SYNJ1	100	77.487	Gorilla_gorilla
ENSXETG00000009899	synj1	84	64.209	ENSHBUG00000007774	synj1	96	65.702	Haplochromis_burtoni
ENSXETG00000009899	synj1	95	70.124	ENSHGLG00000006420	SYNJ1	100	85.127	Heterocephalus_glaber_female
ENSXETG00000009899	synj1	92	78.961	ENSHGLG00100012591	SYNJ1	100	85.127	Heterocephalus_glaber_male
ENSXETG00000009899	synj1	79	80.762	ENSHCOG00000012774	synj1	94	80.762	Hippocampus_comes
ENSXETG00000009899	synj1	69	75.206	ENSIPUG00000010691	SYNJ1	100	57.863	Ictalurus_punctatus
ENSXETG00000009899	synj1	95	71.150	ENSSTOG00000015806	SYNJ1	100	78.401	Ictidomys_tridecemlineatus
ENSXETG00000009899	synj1	95	66.039	ENSJJAG00000020168	Synj1	100	65.742	Jaculus_jaculus
ENSXETG00000009899	synj1	69	73.195	ENSKMAG00000004221	synj1	87	74.172	Kryptolebias_marmoratus
ENSXETG00000009899	synj1	70	72.857	ENSLBEG00000015081	synj1	98	59.365	Labrus_bergylta
ENSXETG00000009899	synj1	99	64.735	ENSLACG00000005928	SYNJ1	99	65.258	Latimeria_chalumnae
ENSXETG00000009899	synj1	95	67.250	ENSLOCG00000009230	synj1	99	67.797	Lepisosteus_oculatus
ENSXETG00000009899	synj1	95	70.784	ENSLAFG00000011806	SYNJ1	100	69.535	Loxodonta_africana
ENSXETG00000009899	synj1	91	81.953	ENSMFAG00000018883	SYNJ1	99	77.523	Macaca_fascicularis
ENSXETG00000009899	synj1	100	68.037	ENSMMUG00000004624	SYNJ1	100	78.326	Macaca_mulatta
ENSXETG00000009899	synj1	100	67.705	ENSMNEG00000040077	SYNJ1	94	78.219	Macaca_nemestrina
ENSXETG00000009899	synj1	93	83.167	ENSMLEG00000037029	SYNJ1	100	77.786	Mandrillus_leucophaeus
ENSXETG00000009899	synj1	86	63.798	ENSMAMG00000013404	synj1	91	59.536	Mastacembelus_armatus
ENSXETG00000009899	synj1	69	73.893	ENSMZEG00005024358	synj1	96	65.776	Maylandia_zebra
ENSXETG00000009899	synj1	100	69.605	ENSMGAG00000014522	SYNJ1	100	69.821	Meleagris_gallopavo
ENSXETG00000009899	synj1	84	77.903	ENSMAUG00000009743	Synj1	100	84.561	Mesocricetus_auratus
ENSXETG00000009899	synj1	100	68.411	ENSMICG00000034953	SYNJ1	100	76.814	Microcebus_murinus
ENSXETG00000009899	synj1	73	71.685	ENSMMOG00000010203	synj1	96	66.311	Mola_mola
ENSXETG00000009899	synj1	83	72.604	ENSMODG00000021073	SYNJ1	100	72.537	Monodelphis_domestica
ENSXETG00000009899	synj1	86	63.095	ENSMALG00000014015	synj1	88	60.988	Monopterus_albus
ENSXETG00000009899	synj1	95	71.204	MGP_CAROLIEiJ_G0020951	Synj1	100	85.127	Mus_caroli
ENSXETG00000009899	synj1	100	68.831	ENSMUSG00000022973	Synj1	100	85.127	Mus_musculus
ENSXETG00000009899	synj1	95	71.466	MGP_PahariEiJ_G0016656	Synj1	100	85.127	Mus_pahari
ENSXETG00000009899	synj1	100	68.904	MGP_SPRETEiJ_G0021857	Synj1	100	85.269	Mus_spretus
ENSXETG00000009899	synj1	100	69.321	ENSMPUG00000001153	SYNJ1	100	69.487	Mustela_putorius_furo
ENSXETG00000009899	synj1	65	60.664	ENSMLUG00000005764	-	100	58.766	Myotis_lucifugus
ENSXETG00000009899	synj1	84	78.336	ENSNGAG00000000453	Synj1	100	85.127	Nannospalax_galili
ENSXETG00000009899	synj1	69	70.063	ENSNBRG00000011936	synj1	95	57.979	Neolamprologus_brichardi
ENSXETG00000009899	synj1	89	64.444	ENSNLEG00000003734	SYNJ1	100	72.973	Nomascus_leucogenys
ENSXETG00000009899	synj1	74	63.529	ENSMEUG00000004158	-	73	67.226	Notamacropus_eugenii
ENSXETG00000009899	synj1	88	81.807	ENSOPRG00000013602	SYNJ1	93	81.807	Ochotona_princeps
ENSXETG00000009899	synj1	86	65.354	ENSONIG00000004667	synj1	100	63.767	Oreochromis_niloticus
ENSXETG00000009899	synj1	93	68.600	ENSOANG00000006929	SYNJ1	100	66.058	Ornithorhynchus_anatinus
ENSXETG00000009899	synj1	100	65.420	ENSOCUG00000001420	SYNJ1	100	66.831	Oryctolagus_cuniculus
ENSXETG00000009899	synj1	70	73.297	ENSORLG00000004320	synj1	95	65.616	Oryzias_latipes
ENSXETG00000009899	synj1	70	73.477	ENSORLG00015018077	synj1	92	58.526	Oryzias_latipes_hsok
ENSXETG00000009899	synj1	69	73.375	ENSOMEG00000014322	synj1	95	65.015	Oryzias_melastigma
ENSXETG00000009899	synj1	100	66.175	ENSOGAG00000006010	SYNJ1	98	66.543	Otolemur_garnettii
ENSXETG00000009899	synj1	96	71.642	ENSOARG00000013414	SYNJ1	97	69.112	Ovis_aries
ENSXETG00000009899	synj1	100	68.580	ENSPPAG00000026784	SYNJ1	100	77.636	Pan_paniscus
ENSXETG00000009899	synj1	100	68.820	ENSPPRG00000023469	SYNJ1	100	77.412	Panthera_pardus
ENSXETG00000009899	synj1	100	68.646	ENSPTIG00000007930	SYNJ1	100	77.487	Panthera_tigris_altaica
ENSXETG00000009899	synj1	100	67.038	ENSPTRG00000048135	-	100	74.888	Pan_troglodytes
ENSXETG00000009899	synj1	100	68.580	ENSPTRG00000023787	SYNJ1	100	77.636	Pan_troglodytes
ENSXETG00000009899	synj1	93	83.077	ENSPANG00000022531	SYNJ1	100	78.251	Papio_anubis
ENSXETG00000009899	synj1	69	75.678	ENSPKIG00000022603	synj1	97	70.541	Paramormyrops_kingsleyae
ENSXETG00000009899	synj1	69	73.195	ENSPMGG00000016831	synj1	99	73.285	Periophthalmus_magnuspinnatus
ENSXETG00000009899	synj1	84	77.978	ENSPEMG00000018767	Synj1	100	85.127	Peromyscus_maniculatus_bairdii
ENSXETG00000009899	synj1	65	59.429	ENSPMAG00000002887	synj1	74	61.039	Petromyzon_marinus
ENSXETG00000009899	synj1	100	66.380	ENSPCIG00000016372	SYNJ1	100	74.664	Phascolarctos_cinereus
ENSXETG00000009899	synj1	69	74.121	ENSPFOG00000016886	synj1	95	66.242	Poecilia_formosa
ENSXETG00000009899	synj1	86	62.219	ENSPLAG00000017559	synj1	95	65.015	Poecilia_latipinna
ENSXETG00000009899	synj1	86	62.360	ENSPMEG00000007643	synj1	96	57.853	Poecilia_mexicana
ENSXETG00000009899	synj1	85	64.668	ENSPREG00000012412	synj1	95	66.113	Poecilia_reticulata
ENSXETG00000009899	synj1	85	75.255	ENSPPYG00000011365	SYNJ1	96	76.974	Pongo_abelii
ENSXETG00000009899	synj1	82	84.286	ENSPCAG00000009906	SYNJ1	84	84.286	Procavia_capensis
ENSXETG00000009899	synj1	93	77.778	ENSPCOG00000024841	SYNJ1	100	74.201	Propithecus_coquereli
ENSXETG00000009899	synj1	97	85.477	ENSPVAG00000000892	SYNJ1	97	85.477	Pteropus_vampyrus
ENSXETG00000009899	synj1	84	63.086	ENSPNYG00000022989	synj1	95	65.859	Pundamilia_nyererei
ENSXETG00000009899	synj1	69	74.661	ENSPNAG00000021119	synj1	90	74.661	Pygocentrus_nattereri
ENSXETG00000009899	synj1	100	69.527	ENSRNOG00000002051	Synj1	100	78.502	Rattus_norvegicus
ENSXETG00000009899	synj1	100	68.221	ENSRBIG00000034477	SYNJ1	100	77.711	Rhinopithecus_bieti
ENSXETG00000009899	synj1	100	68.221	ENSRROG00000039256	SYNJ1	100	77.636	Rhinopithecus_roxellana
ENSXETG00000009899	synj1	100	68.098	ENSSBOG00000021001	SYNJ1	100	77.487	Saimiri_boliviensis_boliviensis
ENSXETG00000009899	synj1	98	66.815	ENSSHAG00000008538	SYNJ1	99	66.355	Sarcophilus_harrisii
ENSXETG00000009899	synj1	95	60.766	ENSSFOG00015006095	synj1	100	58.652	Scleropages_formosus
ENSXETG00000009899	synj1	83	62.832	ENSSMAG00000018066	synj1	99	59.480	Scophthalmus_maximus
ENSXETG00000009899	synj1	92	60.115	ENSSDUG00000013058	synj1	89	60.103	Seriola_dumerili
ENSXETG00000009899	synj1	92	60.038	ENSSLDG00000021406	synj1	96	65.697	Seriola_lalandi_dorsalis
ENSXETG00000009899	synj1	67	83.333	ENSSARG00000009490	SYNJ1	70	83.333	Sorex_araneus
ENSXETG00000009899	synj1	98	65.826	ENSSPUG00000012552	SYNJ1	99	66.791	Sphenodon_punctatus
ENSXETG00000009899	synj1	65	72.824	ENSSPAG00000006812	SYNJ1	89	58.361	Stegastes_partitus
ENSXETG00000009899	synj1	69	73.532	ENSSPAG00000017029	synj1	94	65.657	Stegastes_partitus
ENSXETG00000009899	synj1	97	66.432	ENSSSCG00000012035	SYNJ1	100	76.694	Sus_scrofa
ENSXETG00000009899	synj1	100	69.969	ENSTGUG00000013445	SYNJ1	100	69.226	Taeniopygia_guttata
ENSXETG00000009899	synj1	73	70.598	ENSTRUG00000006907	synj1	83	74.449	Takifugu_rubripes
ENSXETG00000009899	synj1	89	62.003	ENSTNIG00000009940	synj1	97	65.136	Tetraodon_nigroviridis
ENSXETG00000009899	synj1	85	92.208	ENSTBEG00000016298	SYNJ1	89	86.076	Tupaia_belangeri
ENSXETG00000009899	synj1	100	61.878	ENSTTRG00000002222	SYNJ1	100	61.519	Tursiops_truncatus
ENSXETG00000009899	synj1	92	83.638	ENSUAMG00000018606	SYNJ1	100	84.140	Ursus_americanus
ENSXETG00000009899	synj1	100	65.986	ENSUMAG00000018419	SYNJ1	100	84.140	Ursus_maritimus
ENSXETG00000009899	synj1	82	84.357	ENSVPAG00000001241	SYNJ1	87	84.357	Vicugna_pacos
ENSXETG00000009899	synj1	100	69.159	ENSVVUG00000023125	SYNJ1	100	78.384	Vulpes_vulpes
ENSXETG00000009899	synj1	69	73.736	ENSXCOG00000011896	synj1	97	66.165	Xiphophorus_couchianus
ENSXETG00000009899	synj1	84	65.058	ENSXMAG00000017524	synj1	100	66.544	Xiphophorus_maculatus