EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000010093 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: -
Full Name: Xenopus tropicalis SBDS ribosome assembly guanine nucleotide exchange factor (sbds)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 10103 bases
Position: chrGL172807.1:672663-682765
Accession: NM_001004953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000022243	SBDS	PF01172.18	9.2e-35	1	1
ENSXETP00000059301	SBDS	PF01172.18	1.1e-32	1	1
ENSXETP00000022243	SBDS_C	PF09377.10	6.5e-40	1	1
ENSXETP00000059301	SBDS_C	PF09377.10	6.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000022243	-	3852	-	ENSXETP00000022243	250 (aa)	-	Q6DIT8
ENSXETT00000063892	-	3852	-	ENSXETP00000059301	250 (aa)	-	F7AEC2

Gene Model

Click here to download ENSXETG00000010093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010093	sbds	100	86.400	ENSG00000126524	SBDS	100	86.400	Homo_sapiens
ENSXETG00000010093	sbds	99	86.747	ENSAPOG00000014285	sbds	100	86.747	Acanthochromis_polyacanthus
ENSXETG00000010093	sbds	100	86.400	ENSAMEG00000018167	SBDS	100	86.400	Ailuropoda_melanoleuca
ENSXETG00000010093	sbds	99	84.921	ENSACIG00000007308	sbds	100	84.921	Amphilophus_citrinellus
ENSXETG00000010093	sbds	99	85.944	ENSAOCG00000016770	sbds	100	85.944	Amphiprion_ocellaris
ENSXETG00000010093	sbds	99	86.345	ENSAPEG00000015897	sbds	100	86.345	Amphiprion_percula
ENSXETG00000010093	sbds	99	87.149	ENSATEG00000006901	sbds	100	87.149	Anabas_testudineus
ENSXETG00000010093	sbds	92	80.952	ENSANAG00000024342	-	97	80.952	Aotus_nancymaae
ENSXETG00000010093	sbds	83	85.990	ENSANAG00000037501	-	100	85.990	Aotus_nancymaae
ENSXETG00000010093	sbds	99	85.944	ENSACLG00000018750	sbds	100	85.944	Astatotilapia_calliptera
ENSXETG00000010093	sbds	100	88.800	ENSAMXG00000005361	sbds	100	88.800	Astyanax_mexicanus
ENSXETG00000010093	sbds	100	86.400	ENSBTAG00000004051	SBDS	100	86.400	Bos_taurus
ENSXETG00000010093	sbds	98	57.724	WBGene00021063	sbds-1	97	57.724	Caenorhabditis_elegans
ENSXETG00000010093	sbds	100	86.400	ENSCJAG00000041007	SBDS	100	86.400	Callithrix_jacchus
ENSXETG00000010093	sbds	100	84.524	ENSCAFG00000010797	SBDS	100	84.524	Canis_familiaris
ENSXETG00000010093	sbds	100	86.400	ENSCAFG00020005357	SBDS	100	86.400	Canis_lupus_dingo
ENSXETG00000010093	sbds	100	86.400	ENSCHIG00000026854	SBDS	100	86.400	Capra_hircus
ENSXETG00000010093	sbds	100	86.400	ENSTSYG00000033822	SBDS	100	86.400	Carlito_syrichta
ENSXETG00000010093	sbds	66	85.976	ENSCAPG00000006634	SBDS	100	85.976	Cavia_aperea
ENSXETG00000010093	sbds	100	86.400	ENSCPOG00000036143	SBDS	100	86.400	Cavia_porcellus
ENSXETG00000010093	sbds	100	86.400	ENSCCAG00000020671	SBDS	100	86.400	Cebus_capucinus
ENSXETG00000010093	sbds	100	86.400	ENSCATG00000039026	SBDS	100	86.400	Cercocebus_atys
ENSXETG00000010093	sbds	100	86.800	ENSCLAG00000005721	-	100	86.800	Chinchilla_lanigera
ENSXETG00000010093	sbds	99	62.500	ENSCLAG00000002113	-	99	62.500	Chinchilla_lanigera
ENSXETG00000010093	sbds	100	86.400	ENSCSAG00000018275	SBDS	100	86.400	Chlorocebus_sabaeus
ENSXETG00000010093	sbds	100	82.000	ENSCHOG00000003795	SBDS	100	82.000	Choloepus_hoffmanni
ENSXETG00000010093	sbds	100	88.400	ENSCPBG00000014893	SBDS	100	88.400	Chrysemys_picta_bellii
ENSXETG00000010093	sbds	99	68.000	ENSCSAVG00000011811	-	100	68.000	Ciona_savignyi
ENSXETG00000010093	sbds	100	86.000	ENSCANG00000032368	SBDS	100	86.000	Colobus_angolensis_palliatus
ENSXETG00000010093	sbds	66	84.756	ENSCGRG00001019886	Sbds	100	84.756	Cricetulus_griseus_chok1gshd
ENSXETG00000010093	sbds	83	85.024	ENSCGRG00000009211	Sbds	100	85.024	Cricetulus_griseus_crigri
ENSXETG00000010093	sbds	99	85.542	ENSCSEG00000005798	sbds	100	85.542	Cynoglossus_semilaevis
ENSXETG00000010093	sbds	99	82.731	ENSCVAG00000001053	sbds	100	82.731	Cyprinodon_variegatus
ENSXETG00000010093	sbds	100	88.400	ENSDARG00000027803	sbds	100	88.400	Danio_rerio
ENSXETG00000010093	sbds	100	86.400	ENSDNOG00000041174	SBDS	100	86.400	Dasypus_novemcinctus
ENSXETG00000010093	sbds	100	85.200	ENSDORG00000026218	Sbds	100	85.200	Dipodomys_ordii
ENSXETG00000010093	sbds	90	61.404	FBgn0035714	CG8549	99	59.438	Drosophila_melanogaster
ENSXETG00000010093	sbds	93	59.227	ENSEBUG00000015780	sbds	100	59.227	Eptatretus_burgeri
ENSXETG00000010093	sbds	100	86.400	ENSEASG00005008821	SBDS	100	86.400	Equus_asinus_asinus
ENSXETG00000010093	sbds	100	86.400	ENSECAG00000008202	SBDS	100	86.400	Equus_caballus
ENSXETG00000010093	sbds	83	67.308	ENSEEUG00000004768	SBDS	100	67.308	Erinaceus_europaeus
ENSXETG00000010093	sbds	100	84.400	ENSELUG00000008382	sbds	100	84.400	Esox_lucius
ENSXETG00000010093	sbds	100	86.000	ENSFCAG00000022142	SBDS	100	86.000	Felis_catus
ENSXETG00000010093	sbds	100	88.800	ENSFALG00000013808	SBDS	100	88.800	Ficedula_albicollis
ENSXETG00000010093	sbds	100	86.400	ENSFDAG00000018947	-	100	86.400	Fukomys_damarensis
ENSXETG00000010093	sbds	99	81.124	ENSFHEG00000000708	sbds	99	81.781	Fundulus_heteroclitus
ENSXETG00000010093	sbds	100	84.400	ENSGMOG00000018356	sbds	99	84.400	Gadus_morhua
ENSXETG00000010093	sbds	100	86.800	ENSGALG00000027989	SBDS	100	86.800	Gallus_gallus
ENSXETG00000010093	sbds	92	80.870	ENSGAFG00000014204	sbds	100	80.870	Gambusia_affinis
ENSXETG00000010093	sbds	99	82.731	ENSGACG00000012697	sbds	100	82.731	Gasterosteus_aculeatus
ENSXETG00000010093	sbds	86	87.850	ENSGAGG00000022402	SBDS	100	87.850	Gopherus_agassizii
ENSXETG00000010093	sbds	96	69.295	ENSGGOG00000040023	-	92	69.295	Gorilla_gorilla
ENSXETG00000010093	sbds	99	85.944	ENSHBUG00000002660	sbds	100	85.944	Haplochromis_burtoni
ENSXETG00000010093	sbds	100	85.600	ENSHGLG00000009671	SBDS	100	85.600	Heterocephalus_glaber_female
ENSXETG00000010093	sbds	100	85.600	ENSHGLG00100011332	SBDS	100	85.600	Heterocephalus_glaber_male
ENSXETG00000010093	sbds	99	81.526	ENSHCOG00000018606	sbds	100	81.526	Hippocampus_comes
ENSXETG00000010093	sbds	100	88.000	ENSIPUG00000006536	sbds	100	88.000	Ictalurus_punctatus
ENSXETG00000010093	sbds	100	83.200	ENSJJAG00000012033	-	100	83.200	Jaculus_jaculus
ENSXETG00000010093	sbds	100	62.846	ENSJJAG00000003934	-	100	62.846	Jaculus_jaculus
ENSXETG00000010093	sbds	99	85.542	ENSKMAG00000018542	sbds	100	85.542	Kryptolebias_marmoratus
ENSXETG00000010093	sbds	99	83.133	ENSLBEG00000016687	sbds	100	83.133	Labrus_bergylta
ENSXETG00000010093	sbds	100	75.984	ENSLACG00000018916	SBDS	100	75.984	Latimeria_chalumnae
ENSXETG00000010093	sbds	100	89.200	ENSLOCG00000004073	sbds	100	89.200	Lepisosteus_oculatus
ENSXETG00000010093	sbds	100	85.600	ENSLAFG00000008763	SBDS	100	85.600	Loxodonta_africana
ENSXETG00000010093	sbds	100	86.400	ENSMFAG00000032620	SBDS	100	86.400	Macaca_fascicularis
ENSXETG00000010093	sbds	100	86.400	ENSMMUG00000045653	SBDS	100	86.400	Macaca_mulatta
ENSXETG00000010093	sbds	100	86.400	ENSMNEG00000031523	SBDS	100	86.400	Macaca_nemestrina
ENSXETG00000010093	sbds	100	67.323	ENSMLEG00000036826	SBDS	100	67.323	Mandrillus_leucophaeus
ENSXETG00000010093	sbds	99	85.944	ENSMAMG00000016062	sbds	100	85.944	Mastacembelus_armatus
ENSXETG00000010093	sbds	99	85.944	ENSMZEG00005024385	sbds	100	85.944	Maylandia_zebra
ENSXETG00000010093	sbds	100	86.800	ENSMGAG00000002119	SBDS	100	86.800	Meleagris_gallopavo
ENSXETG00000010093	sbds	99	68.675	ENSMAUG00000022214	-	100	68.675	Mesocricetus_auratus
ENSXETG00000010093	sbds	100	86.400	ENSMICG00000014366	SBDS	100	86.400	Microcebus_murinus
ENSXETG00000010093	sbds	100	86.000	ENSMOCG00000011739	Sbds	100	86.000	Microtus_ochrogaster
ENSXETG00000010093	sbds	99	78.400	ENSMMOG00000005061	sbds	100	77.600	Mola_mola
ENSXETG00000010093	sbds	100	86.800	ENSMODG00000006644	SBDS	100	86.800	Monodelphis_domestica
ENSXETG00000010093	sbds	99	83.936	ENSMALG00000010219	sbds	100	83.936	Monopterus_albus
ENSXETG00000010093	sbds	100	86.800	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSXETG00000010093	sbds	100	86.400	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSXETG00000010093	sbds	100	86.800	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSXETG00000010093	sbds	100	86.400	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSXETG00000010093	sbds	67	85.714	ENSMPUG00000016192	SBDS	97	85.714	Mustela_putorius_furo
ENSXETG00000010093	sbds	73	83.516	ENSMLUG00000013575	SBDS	100	83.516	Myotis_lucifugus
ENSXETG00000010093	sbds	100	86.000	ENSNGAG00000012093	Sbds	100	86.000	Nannospalax_galili
ENSXETG00000010093	sbds	99	85.944	ENSNBRG00000017027	sbds	100	85.944	Neolamprologus_brichardi
ENSXETG00000010093	sbds	100	86.400	ENSNLEG00000013288	SBDS	100	86.400	Nomascus_leucogenys
ENSXETG00000010093	sbds	100	84.800	ENSOPRG00000008721	SBDS	100	84.800	Ochotona_princeps
ENSXETG00000010093	sbds	100	76.800	ENSODEG00000019253	-	84	76.800	Octodon_degus
ENSXETG00000010093	sbds	99	63.855	ENSODEG00000000137	-	85	63.600	Octodon_degus
ENSXETG00000010093	sbds	99	68.675	ENSODEG00000001116	-	99	68.675	Octodon_degus
ENSXETG00000010093	sbds	99	85.141	ENSONIG00000005874	sbds	100	85.141	Oreochromis_niloticus
ENSXETG00000010093	sbds	83	83.092	ENSOANG00000007674	-	100	83.092	Ornithorhynchus_anatinus
ENSXETG00000010093	sbds	100	86.000	ENSOCUG00000003170	SBDS	100	86.000	Oryctolagus_cuniculus
ENSXETG00000010093	sbds	99	84.337	ENSORLG00000023489	sbds	100	84.337	Oryzias_latipes
ENSXETG00000010093	sbds	99	84.337	ENSORLG00020019282	sbds	100	84.337	Oryzias_latipes_hni
ENSXETG00000010093	sbds	99	84.337	ENSORLG00015008005	sbds	100	84.337	Oryzias_latipes_hsok
ENSXETG00000010093	sbds	99	84.337	ENSOMEG00000022747	sbds	100	84.337	Oryzias_melastigma
ENSXETG00000010093	sbds	100	71.200	ENSOGAG00000015036	-	100	71.200	Otolemur_garnettii
ENSXETG00000010093	sbds	100	86.800	ENSOGAG00000009011	-	100	86.800	Otolemur_garnettii
ENSXETG00000010093	sbds	100	86.400	ENSOARG00000010609	SBDS	100	86.400	Ovis_aries
ENSXETG00000010093	sbds	100	85.600	ENSPPAG00000043889	-	100	85.600	Pan_paniscus
ENSXETG00000010093	sbds	100	86.000	ENSPPRG00000002307	SBDS	100	86.000	Panthera_pardus
ENSXETG00000010093	sbds	100	86.000	ENSPTIG00000021308	SBDS	100	86.000	Panthera_tigris_altaica
ENSXETG00000010093	sbds	100	73.200	ENSPTRG00000050835	-	100	73.200	Pan_troglodytes
ENSXETG00000010093	sbds	100	73.200	ENSPTRG00000047744	-	100	73.200	Pan_troglodytes
ENSXETG00000010093	sbds	87	83.410	ENSPTRG00000048174	-	96	83.410	Pan_troglodytes
ENSXETG00000010093	sbds	100	86.400	ENSPTRG00000019254	SBDS	100	86.400	Pan_troglodytes
ENSXETG00000010093	sbds	100	86.000	ENSPANG00000004078	SBDS	100	86.000	Papio_anubis
ENSXETG00000010093	sbds	100	87.600	ENSPKIG00000006489	sbds	100	87.600	Paramormyrops_kingsleyae
ENSXETG00000010093	sbds	83	88.462	ENSPSIG00000014603	SBDS	100	88.462	Pelodiscus_sinensis
ENSXETG00000010093	sbds	99	84.739	ENSPMGG00000004246	sbds	100	84.739	Periophthalmus_magnuspinnatus
ENSXETG00000010093	sbds	100	86.000	ENSPEMG00000008728	Sbds	100	86.000	Peromyscus_maniculatus_bairdii
ENSXETG00000010093	sbds	100	87.200	ENSPCIG00000029718	SBDS	100	87.200	Phascolarctos_cinereus
ENSXETG00000010093	sbds	99	83.534	ENSPFOG00000015837	sbds	100	83.534	Poecilia_formosa
ENSXETG00000010093	sbds	99	83.936	ENSPLAG00000003641	sbds	100	83.936	Poecilia_latipinna
ENSXETG00000010093	sbds	99	83.534	ENSPMEG00000019483	sbds	100	83.534	Poecilia_mexicana
ENSXETG00000010093	sbds	99	83.534	ENSPREG00000018758	sbds	100	83.534	Poecilia_reticulata
ENSXETG00000010093	sbds	100	86.400	ENSPPYG00000017513	SBDS	100	86.400	Pongo_abelii
ENSXETG00000010093	sbds	100	86.000	ENSPCOG00000021098	SBDS	100	86.000	Propithecus_coquereli
ENSXETG00000010093	sbds	100	86.000	ENSPVAG00000009369	SBDS	100	86.000	Pteropus_vampyrus
ENSXETG00000010093	sbds	99	85.542	ENSPNYG00000022403	sbds	100	85.542	Pundamilia_nyererei
ENSXETG00000010093	sbds	100	88.400	ENSPNAG00000001120	sbds	100	88.400	Pygocentrus_nattereri
ENSXETG00000010093	sbds	100	86.400	ENSRNOG00000000888	Sbds	100	86.400	Rattus_norvegicus
ENSXETG00000010093	sbds	100	86.400	ENSRBIG00000035557	SBDS	100	86.400	Rhinopithecus_bieti
ENSXETG00000010093	sbds	100	70.400	ENSRROG00000041986	-	100	67.200	Rhinopithecus_roxellana
ENSXETG00000010093	sbds	100	86.400	ENSRROG00000040842	-	100	86.400	Rhinopithecus_roxellana
ENSXETG00000010093	sbds	96	45.122	YLR022C	-	96	45.306	Saccharomyces_cerevisiae
ENSXETG00000010093	sbds	93	84.914	ENSSBOG00000022460	SBDS	100	84.914	Saimiri_boliviensis_boliviensis
ENSXETG00000010093	sbds	100	76.800	ENSSHAG00000010263	SBDS	100	76.800	Sarcophilus_harrisii
ENSXETG00000010093	sbds	100	90.000	ENSSFOG00015001108	sbds	100	90.000	Scleropages_formosus
ENSXETG00000010093	sbds	99	85.141	ENSSMAG00000020506	sbds	100	85.141	Scophthalmus_maximus
ENSXETG00000010093	sbds	99	85.141	ENSSDUG00000001528	sbds	100	85.141	Seriola_dumerili
ENSXETG00000010093	sbds	99	85.141	ENSSLDG00000003659	sbds	100	85.141	Seriola_lalandi_dorsalis
ENSXETG00000010093	sbds	73	88.372	ENSSARG00000001899	-	73	88.372	Sorex_araneus
ENSXETG00000010093	sbds	61	88.235	ENSSARG00000013132	-	100	88.235	Sorex_araneus
ENSXETG00000010093	sbds	100	85.600	ENSSPUG00000002699	SBDS	100	85.600	Sphenodon_punctatus
ENSXETG00000010093	sbds	99	86.345	ENSSPAG00000016419	sbds	100	78.800	Stegastes_partitus
ENSXETG00000010093	sbds	100	86.400	ENSSSCG00000007732	SBDS	100	86.400	Sus_scrofa
ENSXETG00000010093	sbds	66	89.697	ENSTGUG00000003426	SBDS	99	89.697	Taeniopygia_guttata
ENSXETG00000010093	sbds	99	85.542	ENSTRUG00000021443	sbds	100	85.542	Takifugu_rubripes
ENSXETG00000010093	sbds	99	85.542	ENSTNIG00000019000	sbds	100	85.542	Tetraodon_nigroviridis
ENSXETG00000010093	sbds	83	73.558	ENSTBEG00000001178	SBDS	100	73.558	Tupaia_belangeri
ENSXETG00000010093	sbds	100	67.600	ENSTTRG00000003921	SBDS	100	67.600	Tursiops_truncatus
ENSXETG00000010093	sbds	100	86.400	ENSUAMG00000001326	SBDS	100	86.400	Ursus_americanus
ENSXETG00000010093	sbds	100	86.400	ENSUMAG00000015353	SBDS	100	86.400	Ursus_maritimus
ENSXETG00000010093	sbds	100	86.400	ENSVVUG00000016478	SBDS	100	86.400	Vulpes_vulpes
ENSXETG00000010093	sbds	99	74.297	ENSXCOG00000010639	sbds	100	74.297	Xiphophorus_couchianus
ENSXETG00000010093	sbds	99	84.337	ENSXMAG00000006065	sbds	100	84.337	Xiphophorus_maculatus