EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000010179 (Gene tree)
Gene ID: -
Gene Symbol: ncbp1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 22119 bases
Position: chrGL172865.1:274697-296815
Accession: XB-GENE-5841194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000022452	MIF4G_like	PF09088.11	6.2e-37	1	1
ENSXETP00000062475	MIF4G_like	PF09088.11	1.8e-36	1	1
ENSXETP00000022452	MIF4G_like_2	PF09090.11	1.5e-87	1	1
ENSXETP00000062475	MIF4G_like_2	PF09090.11	1.5e-87	1	1
ENSXETP00000062475	MIF4G	PF02854.19	1.9e-29	1	1
ENSXETP00000022452	MIF4G	PF02854.19	1.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000022452	-	2373	-	ENSXETP00000022452	790 (aa)	-	F7AA70
ENSXETT00000060868	-	2385	-	ENSXETP00000062475	794 (aa)	-	F6ZI49

Gene Model

Click here to download ENSXETG00000010179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010179	ncbp1	100	81.416	ENSG00000136937	NCBP1	100	81.416	Homo_sapiens
ENSXETG00000010179	ncbp1	99	79.345	ENSAPOG00000008002	NCBP1	99	79.345	Acanthochromis_polyacanthus
ENSXETG00000010179	ncbp1	100	81.258	ENSAMEG00000004763	NCBP1	100	81.258	Ailuropoda_melanoleuca
ENSXETG00000010179	ncbp1	99	79.067	ENSACIG00000000274	NCBP1	99	79.067	Amphilophus_citrinellus
ENSXETG00000010179	ncbp1	99	79.597	ENSAOCG00000021148	NCBP1	99	79.597	Amphiprion_ocellaris
ENSXETG00000010179	ncbp1	99	79.597	ENSAPEG00000001701	NCBP1	99	79.597	Amphiprion_percula
ENSXETG00000010179	ncbp1	99	79.345	ENSATEG00000006929	NCBP1	99	79.345	Anabas_testudineus
ENSXETG00000010179	ncbp1	95	82.034	ENSAPLG00000016318	NCBP1	100	82.034	Anas_platyrhynchos
ENSXETG00000010179	ncbp1	100	81.398	ENSACAG00000004409	NCBP1	87	81.398	Anolis_carolinensis
ENSXETG00000010179	ncbp1	100	79.520	ENSANAG00000025744	NCBP1	99	80.748	Aotus_nancymaae
ENSXETG00000010179	ncbp1	99	78.589	ENSACLG00000014812	NCBP1	99	78.589	Astatotilapia_calliptera
ENSXETG00000010179	ncbp1	99	79.020	ENSAMXG00000016364	NCBP1	99	79.020	Astyanax_mexicanus
ENSXETG00000010179	ncbp1	100	81.290	ENSBTAG00000009732	NCBP1	100	81.290	Bos_taurus
ENSXETG00000010179	ncbp1	99	35.366	WBGene00018156	ncbp-1	99	35.000	Caenorhabditis_elegans
ENSXETG00000010179	ncbp1	100	81.542	ENSCJAG00000010840	NCBP1	100	81.542	Callithrix_jacchus
ENSXETG00000010179	ncbp1	100	81.416	ENSCAFG00000002445	NCBP1	100	81.416	Canis_familiaris
ENSXETG00000010179	ncbp1	99	80.971	ENSCAFG00020017997	NCBP1	100	80.702	Canis_lupus_dingo
ENSXETG00000010179	ncbp1	100	80.910	ENSCHIG00000020139	NCBP1	100	80.910	Capra_hircus
ENSXETG00000010179	ncbp1	51	79.602	ENSTSYG00000011914	NCBP1	96	80.000	Carlito_syrichta
ENSXETG00000010179	ncbp1	81	71.495	ENSCAPG00000014252	NCBP1	90	71.495	Cavia_aperea
ENSXETG00000010179	ncbp1	95	80.637	ENSCPOG00000012573	NCBP1	99	80.637	Cavia_porcellus
ENSXETG00000010179	ncbp1	100	81.416	ENSCCAG00000032297	NCBP1	100	81.416	Cebus_capucinus
ENSXETG00000010179	ncbp1	100	81.416	ENSCATG00000010052	NCBP1	100	81.416	Cercocebus_atys
ENSXETG00000010179	ncbp1	100	81.290	ENSCLAG00000014339	NCBP1	100	81.290	Chinchilla_lanigera
ENSXETG00000010179	ncbp1	100	81.416	ENSCSAG00000010929	NCBP1	100	81.416	Chlorocebus_sabaeus
ENSXETG00000010179	ncbp1	90	87.850	ENSCHOG00000010332	NCBP1	91	85.470	Choloepus_hoffmanni
ENSXETG00000010179	ncbp1	100	79.623	ENSCPBG00000024344	NCBP1	99	82.507	Chrysemys_picta_bellii
ENSXETG00000010179	ncbp1	99	53.720	ENSCING00000008990	-	99	53.846	Ciona_intestinalis
ENSXETG00000010179	ncbp1	99	52.190	ENSCSAVG00000005300	-	99	53.403	Ciona_savignyi
ENSXETG00000010179	ncbp1	100	81.416	ENSCANG00000036913	NCBP1	100	81.416	Colobus_angolensis_palliatus
ENSXETG00000010179	ncbp1	100	80.657	ENSCGRG00001015771	Ncbp1	100	80.657	Cricetulus_griseus_chok1gshd
ENSXETG00000010179	ncbp1	99	80.538	ENSCGRG00000010311	Ncbp1	100	80.538	Cricetulus_griseus_crigri
ENSXETG00000010179	ncbp1	99	78.967	ENSCSEG00000012377	NCBP1	99	78.967	Cynoglossus_semilaevis
ENSXETG00000010179	ncbp1	99	78.392	ENSCVAG00000008795	NCBP1	99	79.146	Cyprinodon_variegatus
ENSXETG00000010179	ncbp1	100	80.910	ENSDNOG00000006885	NCBP1	100	80.910	Dasypus_novemcinctus
ENSXETG00000010179	ncbp1	100	77.107	ENSDORG00000013652	Ncbp1	100	77.107	Dipodomys_ordii
ENSXETG00000010179	ncbp1	100	55.362	FBgn0022942	Cbp80	100	55.362	Drosophila_melanogaster
ENSXETG00000010179	ncbp1	83	33.188	FBgn0038887	CG7907	87	33.188	Drosophila_melanogaster
ENSXETG00000010179	ncbp1	89	79.521	ENSETEG00000009705	NCBP1	89	79.521	Echinops_telfairi
ENSXETG00000010179	ncbp1	100	70.640	ENSEBUG00000008386	NCBP1	100	70.640	Eptatretus_burgeri
ENSXETG00000010179	ncbp1	100	81.037	ENSEASG00005022795	NCBP1	100	81.037	Equus_asinus_asinus
ENSXETG00000010179	ncbp1	100	81.163	ENSECAG00000013847	NCBP1	100	81.163	Equus_caballus
ENSXETG00000010179	ncbp1	95	76.658	ENSEEUG00000015973	NCBP1	99	76.790	Erinaceus_europaeus
ENSXETG00000010179	ncbp1	99	78.994	ENSELUG00000022519	NCBP1	99	78.994	Esox_lucius
ENSXETG00000010179	ncbp1	100	81.290	ENSFCAG00000001206	NCBP1	100	81.290	Felis_catus
ENSXETG00000010179	ncbp1	98	81.807	ENSFALG00000001193	NCBP1	100	82.188	Ficedula_albicollis
ENSXETG00000010179	ncbp1	100	81.037	ENSFDAG00000010864	NCBP1	100	81.037	Fukomys_damarensis
ENSXETG00000010179	ncbp1	99	79.397	ENSFHEG00000000655	NCBP1	99	79.397	Fundulus_heteroclitus
ENSXETG00000010179	ncbp1	99	77.862	ENSGMOG00000008653	NCBP1	99	78.113	Gadus_morhua
ENSXETG00000010179	ncbp1	98	82.927	ENSGALG00000002087	NCBP1	100	82.598	Gallus_gallus
ENSXETG00000010179	ncbp1	99	79.146	ENSGAFG00000017787	NCBP1	99	79.146	Gambusia_affinis
ENSXETG00000010179	ncbp1	99	77.415	ENSGACG00000016772	NCBP1	98	77.415	Gasterosteus_aculeatus
ENSXETG00000010179	ncbp1	100	82.264	ENSGAGG00000019483	NCBP1	100	82.642	Gopherus_agassizii
ENSXETG00000010179	ncbp1	100	81.416	ENSGGOG00000001376	NCBP1	100	81.416	Gorilla_gorilla
ENSXETG00000010179	ncbp1	99	78.589	ENSHBUG00000020843	NCBP1	99	78.589	Haplochromis_burtoni
ENSXETG00000010179	ncbp1	100	81.163	ENSHGLG00000001882	NCBP1	100	81.163	Heterocephalus_glaber_female
ENSXETG00000010179	ncbp1	100	70.618	ENSHGLG00000018112	-	100	70.618	Heterocephalus_glaber_female
ENSXETG00000010179	ncbp1	100	70.366	ENSHGLG00100017373	-	100	70.366	Heterocephalus_glaber_male
ENSXETG00000010179	ncbp1	100	81.163	ENSHGLG00100013014	NCBP1	100	81.163	Heterocephalus_glaber_male
ENSXETG00000010179	ncbp1	77	73.008	ENSHCOG00000000204	NCBP1	91	73.008	Hippocampus_comes
ENSXETG00000010179	ncbp1	99	78.994	ENSIPUG00000007275	ncbp1	99	78.994	Ictalurus_punctatus
ENSXETG00000010179	ncbp1	100	81.290	ENSSTOG00000002695	NCBP1	100	81.290	Ictidomys_tridecemlineatus
ENSXETG00000010179	ncbp1	99	79.345	ENSKMAG00000003594	NCBP1	99	81.874	Kryptolebias_marmoratus
ENSXETG00000010179	ncbp1	99	78.137	ENSLBEG00000011661	NCBP1	99	78.137	Labrus_bergylta
ENSXETG00000010179	ncbp1	100	74.690	ENSLACG00000013955	NCBP1	100	74.938	Latimeria_chalumnae
ENSXETG00000010179	ncbp1	99	68.204	ENSLOCG00000009579	NCBP1	99	68.204	Lepisosteus_oculatus
ENSXETG00000010179	ncbp1	100	81.037	ENSLAFG00000005999	NCBP1	100	81.037	Loxodonta_africana
ENSXETG00000010179	ncbp1	100	81.416	ENSMFAG00000030994	NCBP1	100	81.416	Macaca_fascicularis
ENSXETG00000010179	ncbp1	99	81.154	ENSMMUG00000012281	NCBP1	99	81.223	Macaca_mulatta
ENSXETG00000010179	ncbp1	100	81.416	ENSMNEG00000042790	NCBP1	100	81.416	Macaca_nemestrina
ENSXETG00000010179	ncbp1	100	81.416	ENSMLEG00000030374	NCBP1	100	81.416	Mandrillus_leucophaeus
ENSXETG00000010179	ncbp1	99	79.345	ENSMAMG00000014806	NCBP1	99	79.345	Mastacembelus_armatus
ENSXETG00000010179	ncbp1	97	78.023	ENSMZEG00005009290	-	99	78.023	Maylandia_zebra
ENSXETG00000010179	ncbp1	99	78.589	ENSMZEG00005003469	NCBP1	99	78.589	Maylandia_zebra
ENSXETG00000010179	ncbp1	99	80.178	ENSMAUG00000020583	Ncbp1	99	80.178	Mesocricetus_auratus
ENSXETG00000010179	ncbp1	100	81.037	ENSMICG00000012682	NCBP1	100	81.037	Microcebus_murinus
ENSXETG00000010179	ncbp1	100	80.405	ENSMOCG00000015818	Ncbp1	100	80.405	Microtus_ochrogaster
ENSXETG00000010179	ncbp1	91	77.235	ENSMMOG00000002610	NCBP1	99	77.235	Mola_mola
ENSXETG00000010179	ncbp1	100	80.784	ENSMODG00000003202	NCBP1	99	80.910	Monodelphis_domestica
ENSXETG00000010179	ncbp1	99	79.219	ENSMALG00000003547	NCBP1	99	79.219	Monopterus_albus
ENSXETG00000010179	ncbp1	100	80.405	MGP_CAROLIEiJ_G0025982	Ncbp1	100	80.405	Mus_caroli
ENSXETG00000010179	ncbp1	100	80.405	ENSMUSG00000028330	Ncbp1	100	80.405	Mus_musculus
ENSXETG00000010179	ncbp1	100	80.657	MGP_PahariEiJ_G0028318	Ncbp1	100	80.657	Mus_pahari
ENSXETG00000010179	ncbp1	100	80.405	MGP_SPRETEiJ_G0026945	Ncbp1	100	80.405	Mus_spretus
ENSXETG00000010179	ncbp1	100	81.290	ENSMPUG00000006399	NCBP1	100	81.290	Mustela_putorius_furo
ENSXETG00000010179	ncbp1	99	80.385	ENSMLUG00000015201	NCBP1	100	80.385	Myotis_lucifugus
ENSXETG00000010179	ncbp1	100	80.657	ENSNGAG00000014101	Ncbp1	100	80.657	Nannospalax_galili
ENSXETG00000010179	ncbp1	74	87.665	ENSNBRG00000014674	NCBP1	94	87.665	Neolamprologus_brichardi
ENSXETG00000010179	ncbp1	100	81.416	ENSNLEG00000016909	NCBP1	100	81.416	Nomascus_leucogenys
ENSXETG00000010179	ncbp1	88	82.063	ENSMEUG00000010672	NCBP1	90	82.511	Notamacropus_eugenii
ENSXETG00000010179	ncbp1	84	73.942	ENSOPRG00000002144	-	88	73.942	Ochotona_princeps
ENSXETG00000010179	ncbp1	100	81.290	ENSODEG00000003232	NCBP1	100	81.290	Octodon_degus
ENSXETG00000010179	ncbp1	99	78.463	ENSONIG00000001502	NCBP1	99	78.463	Oreochromis_niloticus
ENSXETG00000010179	ncbp1	79	81.701	ENSOANG00000001918	NCBP1	100	81.701	Ornithorhynchus_anatinus
ENSXETG00000010179	ncbp1	98	80.977	ENSOCUG00000013853	NCBP1	97	80.977	Oryctolagus_cuniculus
ENSXETG00000010179	ncbp1	99	77.694	ENSORLG00000011008	NCBP1	99	77.945	Oryzias_latipes
ENSXETG00000010179	ncbp1	99	78.070	ENSORLG00020017455	NCBP1	99	78.070	Oryzias_latipes_hni
ENSXETG00000010179	ncbp1	99	77.820	ENSORLG00015012127	NCBP1	99	78.070	Oryzias_latipes_hsok
ENSXETG00000010179	ncbp1	99	78.195	ENSOMEG00000020698	NCBP1	99	78.446	Oryzias_melastigma
ENSXETG00000010179	ncbp1	100	81.132	ENSOGAG00000013888	NCBP1	100	81.132	Otolemur_garnettii
ENSXETG00000010179	ncbp1	100	80.910	ENSOARG00000011233	NCBP1	100	80.910	Ovis_aries
ENSXETG00000010179	ncbp1	100	81.416	ENSPPAG00000026462	NCBP1	100	81.416	Pan_paniscus
ENSXETG00000010179	ncbp1	100	81.416	ENSPPRG00000022574	NCBP1	100	81.416	Panthera_pardus
ENSXETG00000010179	ncbp1	100	81.416	ENSPTIG00000018507	NCBP1	100	81.416	Panthera_tigris_altaica
ENSXETG00000010179	ncbp1	100	81.416	ENSPTRG00000021167	NCBP1	100	81.416	Pan_troglodytes
ENSXETG00000010179	ncbp1	100	81.416	ENSPANG00000025591	NCBP1	100	81.416	Papio_anubis
ENSXETG00000010179	ncbp1	100	77.736	ENSPKIG00000015861	NCBP1	100	78.365	Paramormyrops_kingsleyae
ENSXETG00000010179	ncbp1	64	80.078	ENSPSIG00000009558	NCBP1	100	80.469	Pelodiscus_sinensis
ENSXETG00000010179	ncbp1	99	78.228	ENSPMGG00000020476	NCBP1	99	78.228	Periophthalmus_magnuspinnatus
ENSXETG00000010179	ncbp1	100	80.405	ENSPEMG00000020105	Ncbp1	100	80.405	Peromyscus_maniculatus_bairdii
ENSXETG00000010179	ncbp1	100	63.806	ENSPMAG00000005533	NCBP1	100	63.806	Petromyzon_marinus
ENSXETG00000010179	ncbp1	100	80.784	ENSPCIG00000015800	NCBP1	99	80.910	Phascolarctos_cinereus
ENSXETG00000010179	ncbp1	99	78.974	ENSPFOG00000004158	NCBP1	99	78.974	Poecilia_formosa
ENSXETG00000010179	ncbp1	99	79.271	ENSPLAG00000020002	NCBP1	99	79.271	Poecilia_latipinna
ENSXETG00000010179	ncbp1	99	79.271	ENSPMEG00000019821	NCBP1	99	79.271	Poecilia_mexicana
ENSXETG00000010179	ncbp1	99	78.392	ENSPREG00000006035	NCBP1	99	78.518	Poecilia_reticulata
ENSXETG00000010179	ncbp1	100	81.416	ENSPPYG00000019426	NCBP1	100	81.416	Pongo_abelii
ENSXETG00000010179	ncbp1	86	77.815	ENSPCAG00000009943	NCBP1	86	77.815	Procavia_capensis
ENSXETG00000010179	ncbp1	78	82.895	ENSPCOG00000020024	NCBP1	94	82.895	Propithecus_coquereli
ENSXETG00000010179	ncbp1	100	80.910	ENSPVAG00000005924	NCBP1	100	80.910	Pteropus_vampyrus
ENSXETG00000010179	ncbp1	90	77.203	ENSPNYG00000002140	NCBP1	99	77.203	Pundamilia_nyererei
ENSXETG00000010179	ncbp1	99	79.020	ENSPNAG00000027753	NCBP1	99	79.020	Pygocentrus_nattereri
ENSXETG00000010179	ncbp1	100	80.657	ENSRNOG00000023605	Ncbp1	100	80.657	Rattus_norvegicus
ENSXETG00000010179	ncbp1	100	81.416	ENSRBIG00000043175	NCBP1	100	81.416	Rhinopithecus_bieti
ENSXETG00000010179	ncbp1	100	81.416	ENSRROG00000029767	NCBP1	100	81.416	Rhinopithecus_roxellana
ENSXETG00000010179	ncbp1	100	81.416	ENSSBOG00000019378	NCBP1	100	81.416	Saimiri_boliviensis_boliviensis
ENSXETG00000010179	ncbp1	70	83.012	ENSSHAG00000015882	NCBP1	73	84.047	Sarcophilus_harrisii
ENSXETG00000010179	ncbp1	99	78.333	ENSSFOG00015001872	NCBP1	100	77.876	Scleropages_formosus
ENSXETG00000010179	ncbp1	99	79.093	ENSSMAG00000007463	NCBP1	99	79.093	Scophthalmus_maximus
ENSXETG00000010179	ncbp1	99	79.241	ENSSDUG00000007019	NCBP1	100	79.012	Seriola_dumerili
ENSXETG00000010179	ncbp1	99	79.093	ENSSLDG00000021924	NCBP1	99	79.093	Seriola_lalandi_dorsalis
ENSXETG00000010179	ncbp1	85	75.599	ENSSARG00000007274	NCBP1	87	75.599	Sorex_araneus
ENSXETG00000010179	ncbp1	100	77.244	ENSSPUG00000008609	NCBP1	100	77.370	Sphenodon_punctatus
ENSXETG00000010179	ncbp1	99	79.471	ENSSPAG00000012550	NCBP1	99	79.471	Stegastes_partitus
ENSXETG00000010179	ncbp1	100	81.416	ENSSSCG00000005366	NCBP1	100	81.416	Sus_scrofa
ENSXETG00000010179	ncbp1	100	76.730	ENSTGUG00000001472	NCBP1	100	77.107	Taeniopygia_guttata
ENSXETG00000010179	ncbp1	99	78.841	ENSTRUG00000005287	NCBP1	99	78.841	Takifugu_rubripes
ENSXETG00000010179	ncbp1	100	78.003	ENSTBEG00000004035	NCBP1	100	78.003	Tupaia_belangeri
ENSXETG00000010179	ncbp1	85	83.333	ENSTTRG00000000507	NCBP1	85	83.333	Tursiops_truncatus
ENSXETG00000010179	ncbp1	100	81.290	ENSUAMG00000005471	NCBP1	100	81.290	Ursus_americanus
ENSXETG00000010179	ncbp1	97	79.221	ENSUMAG00000011865	NCBP1	100	80.702	Ursus_maritimus
ENSXETG00000010179	ncbp1	100	77.497	ENSVPAG00000010537	NCBP1	100	77.497	Vicugna_pacos
ENSXETG00000010179	ncbp1	100	81.416	ENSVVUG00000019725	NCBP1	100	81.416	Vulpes_vulpes
ENSXETG00000010179	ncbp1	99	79.020	ENSXMAG00000018253	NCBP1	99	79.020	Xiphophorus_maculatus