EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000010205 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: -
Full Name: signal recognition particle 72kDa
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12321 bases
Position: chrGL173282.1:400530-412850
Accession: XB-GENE-994739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000058615	SRP72	PF08492.12	1.4e-21	1	1
ENSXETP00000022505	SRP72	PF08492.12	6.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000022505	-	1912	-	ENSXETP00000022505	636 (aa)	-	F6UGI0
ENSXETT00000064396	-	1906	-	ENSXETP00000058615	634 (aa)	-	F6YC84

Gene Model

Click here to download ENSXETG00000010205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010205	srp72	97	78.905	ENSG00000174780	SRP72	95	79.278	Homo_sapiens
ENSXETG00000010205	srp72	100	65.827	ENSAPOG00000019438	srp72	93	74.314	Acanthochromis_polyacanthus
ENSXETG00000010205	srp72	97	79.227	ENSAMEG00000008469	SRP72	94	79.592	Ailuropoda_melanoleuca
ENSXETG00000010205	srp72	100	72.926	ENSACIG00000000488	srp72	95	72.926	Amphilophus_citrinellus
ENSXETG00000010205	srp72	100	73.469	ENSAOCG00000011256	srp72	95	73.783	Amphiprion_ocellaris
ENSXETG00000010205	srp72	100	73.469	ENSAPEG00000001512	srp72	95	73.469	Amphiprion_percula
ENSXETG00000010205	srp72	92	75.685	ENSATEG00000006781	srp72	94	76.501	Anabas_testudineus
ENSXETG00000010205	srp72	100	80.094	ENSAPLG00000008751	SRP72	94	80.094	Anas_platyrhynchos
ENSXETG00000010205	srp72	97	80.193	ENSACAG00000002381	SRP72	94	80.534	Anolis_carolinensis
ENSXETG00000010205	srp72	95	78.182	ENSANAG00000020836	-	100	70.543	Aotus_nancymaae
ENSXETG00000010205	srp72	100	73.940	ENSACLG00000014617	srp72	95	73.940	Astatotilapia_calliptera
ENSXETG00000010205	srp72	100	73.469	ENSAMXG00000004011	srp72	95	73.469	Astyanax_mexicanus
ENSXETG00000010205	srp72	97	77.939	ENSBTAG00000010593	SRP72	95	78.179	Bos_taurus
ENSXETG00000010205	srp72	97	78.583	ENSCJAG00000017998	SRP72	95	78.964	Callithrix_jacchus
ENSXETG00000010205	srp72	97	79.066	ENSCAFG00000002244	SRP72	95	79.435	Canis_familiaris
ENSXETG00000010205	srp72	97	79.066	ENSCAFG00020027338	SRP72	98	79.829	Canis_lupus_dingo
ENSXETG00000010205	srp72	97	76.812	ENSCHIG00000021465	SRP72	95	77.080	Capra_hircus
ENSXETG00000010205	srp72	97	78.905	ENSTSYG00000010571	-	94	79.278	Carlito_syrichta
ENSXETG00000010205	srp72	90	60.801	ENSCAPG00000016668	SRP72	100	70.155	Cavia_aperea
ENSXETG00000010205	srp72	97	79.066	ENSCPOG00000000218	SRP72	95	79.435	Cavia_porcellus
ENSXETG00000010205	srp72	95	78.182	ENSCCAG00000030683	-	100	70.543	Cebus_capucinus
ENSXETG00000010205	srp72	97	77.134	ENSCCAG00000030830	-	95	77.551	Cebus_capucinus
ENSXETG00000010205	srp72	98	63.403	ENSCATG00000045359	-	91	63.226	Cercocebus_atys
ENSXETG00000010205	srp72	97	78.905	ENSCATG00000008072	SRP72	95	79.278	Cercocebus_atys
ENSXETG00000010205	srp72	97	78.905	ENSCLAG00000003571	SRP72	95	79.278	Chinchilla_lanigera
ENSXETG00000010205	srp72	97	74.235	ENSCSAG00000005079	SRP72	95	74.725	Chlorocebus_sabaeus
ENSXETG00000010205	srp72	89	74.390	ENSCHOG00000013240	SRP72	84	74.390	Choloepus_hoffmanni
ENSXETG00000010205	srp72	97	80.998	ENSCPBG00000015015	SRP72	95	81.319	Chrysemys_picta_bellii
ENSXETG00000010205	srp72	95	42.587	ENSCING00000002417	-	94	42.489	Ciona_intestinalis
ENSXETG00000010205	srp72	92	41.503	ENSCSAVG00000011288	-	93	40.373	Ciona_savignyi
ENSXETG00000010205	srp72	97	78.905	ENSCANG00000041709	SRP72	95	79.278	Colobus_angolensis_palliatus
ENSXETG00000010205	srp72	98	55.040	ENSCANG00000037920	-	92	56.129	Colobus_angolensis_palliatus
ENSXETG00000010205	srp72	100	78.807	ENSCGRG00001013548	Srp72	95	78.807	Cricetulus_griseus_chok1gshd
ENSXETG00000010205	srp72	99	78.931	ENSCGRG00000003013	Srp72	99	78.931	Cricetulus_griseus_crigri
ENSXETG00000010205	srp72	100	73.783	ENSCSEG00000003616	srp72	97	73.783	Cynoglossus_semilaevis
ENSXETG00000010205	srp72	91	74.177	ENSCVAG00000001520	srp72	95	74.177	Cyprinodon_variegatus
ENSXETG00000010205	srp72	90	74.431	ENSDARG00000014139	srp72	100	73.782	Danio_rerio
ENSXETG00000010205	srp72	97	74.478	ENSDNOG00000039012	SRP72	79	75.274	Dasypus_novemcinctus
ENSXETG00000010205	srp72	97	78.583	ENSDORG00000000171	Srp72	94	78.964	Dipodomys_ordii
ENSXETG00000010205	srp72	94	41.419	FBgn0038810	Srp72	92	41.653	Drosophila_melanogaster
ENSXETG00000010205	srp72	97	78.583	ENSETEG00000005191	SRP72	94	79.121	Echinops_telfairi
ENSXETG00000010205	srp72	78	59.843	ENSEBUG00000003696	srp72	97	59.843	Eptatretus_burgeri
ENSXETG00000010205	srp72	97	79.066	ENSEASG00005017747	SRP72	95	79.435	Equus_asinus_asinus
ENSXETG00000010205	srp72	97	79.066	ENSECAG00000006920	SRP72	95	79.435	Equus_caballus
ENSXETG00000010205	srp72	100	71.094	ENSELUG00000022415	srp72	100	71.532	Esox_lucius
ENSXETG00000010205	srp72	97	79.227	ENSFCAG00000027600	SRP72	94	79.435	Felis_catus
ENSXETG00000010205	srp72	97	81.190	ENSFALG00000006713	SRP72	94	81.348	Ficedula_albicollis
ENSXETG00000010205	srp72	97	78.583	ENSFDAG00000002014	-	95	78.964	Fukomys_damarensis
ENSXETG00000010205	srp72	97	52.273	ENSFDAG00000009793	-	89	50.325	Fukomys_damarensis
ENSXETG00000010205	srp72	100	72.998	ENSFHEG00000017652	srp72	88	72.998	Fundulus_heteroclitus
ENSXETG00000010205	srp72	98	69.231	ENSGMOG00000005986	srp72	95	69.327	Gadus_morhua
ENSXETG00000010205	srp72	97	80.193	ENSGALG00000011403	SRP72	94	80.534	Gallus_gallus
ENSXETG00000010205	srp72	100	73.469	ENSGAFG00000017762	srp72	95	73.469	Gambusia_affinis
ENSXETG00000010205	srp72	100	73.197	ENSGACG00000016749	srp72	95	73.511	Gasterosteus_aculeatus
ENSXETG00000010205	srp72	93	79.832	ENSGAGG00000024611	SRP72	100	80.196	Gopherus_agassizii
ENSXETG00000010205	srp72	97	78.744	ENSGGOG00000013234	-	95	79.121	Gorilla_gorilla
ENSXETG00000010205	srp72	100	73.783	ENSHBUG00000020723	srp72	95	73.783	Haplochromis_burtoni
ENSXETG00000010205	srp72	97	78.422	ENSHGLG00000009791	SRP72	95	78.807	Heterocephalus_glaber_female
ENSXETG00000010205	srp72	97	61.951	ENSHGLG00000018597	-	95	62.776	Heterocephalus_glaber_female
ENSXETG00000010205	srp72	85	68.394	ENSHGLG00000003950	-	93	68.394	Heterocephalus_glaber_female
ENSXETG00000010205	srp72	89	73.298	ENSHGLG00000010633	-	92	73.797	Heterocephalus_glaber_female
ENSXETG00000010205	srp72	55	62.931	ENSHGLG00000003496	-	96	63.529	Heterocephalus_glaber_female
ENSXETG00000010205	srp72	97	73.913	ENSHGLG00000005029	-	92	73.591	Heterocephalus_glaber_female
ENSXETG00000010205	srp72	97	59.289	ENSHGLG00100009346	-	94	59.875	Heterocephalus_glaber_male
ENSXETG00000010205	srp72	97	73.913	ENSHGLG00100011236	-	92	73.591	Heterocephalus_glaber_male
ENSXETG00000010205	srp72	85	67.876	ENSHGLG00100017133	-	93	67.876	Heterocephalus_glaber_male
ENSXETG00000010205	srp72	97	78.422	ENSHGLG00100009021	SRP72	95	78.807	Heterocephalus_glaber_male
ENSXETG00000010205	srp72	100	73.312	ENSHCOG00000013760	srp72	95	73.312	Hippocampus_comes
ENSXETG00000010205	srp72	100	74.097	ENSIPUG00000000210	srp72	95	74.097	Ictalurus_punctatus
ENSXETG00000010205	srp72	97	78.744	ENSSTOG00000007305	SRP72	95	79.121	Ictidomys_tridecemlineatus
ENSXETG00000010205	srp72	97	79.450	ENSJJAG00000018324	Srp72	94	79.278	Jaculus_jaculus
ENSXETG00000010205	srp72	100	71.900	ENSKMAG00000003776	srp72	95	71.963	Kryptolebias_marmoratus
ENSXETG00000010205	srp72	98	75.402	ENSLOCG00000002628	srp72	92	75.523	Lepisosteus_oculatus
ENSXETG00000010205	srp72	97	78.261	ENSLAFG00000018307	SRP72	95	78.650	Loxodonta_africana
ENSXETG00000010205	srp72	97	78.905	ENSMFAG00000031065	SRP72	95	79.278	Macaca_fascicularis
ENSXETG00000010205	srp72	98	64.848	ENSMFAG00000037164	-	93	65.316	Macaca_fascicularis
ENSXETG00000010205	srp72	98	79.040	ENSMMUG00000016368	SRP72	92	78.905	Macaca_mulatta
ENSXETG00000010205	srp72	98	58.748	ENSMMUG00000021262	-	94	58.387	Macaca_mulatta
ENSXETG00000010205	srp72	97	78.905	ENSMNEG00000038065	-	95	79.278	Macaca_nemestrina
ENSXETG00000010205	srp72	95	77.190	ENSMLEG00000030140	-	89	77.517	Mandrillus_leucophaeus
ENSXETG00000010205	srp72	100	73.940	ENSMAMG00000014989	srp72	84	73.940	Mastacembelus_armatus
ENSXETG00000010205	srp72	100	73.940	ENSMZEG00005003325	srp72	95	73.940	Maylandia_zebra
ENSXETG00000010205	srp72	100	77.237	ENSMGAG00000008567	SRP72	100	81.064	Meleagris_gallopavo
ENSXETG00000010205	srp72	100	78.807	ENSMAUG00000001237	Srp72	94	78.807	Mesocricetus_auratus
ENSXETG00000010205	srp72	95	77.686	ENSMICG00000008507	-	100	69.380	Microcebus_murinus
ENSXETG00000010205	srp72	100	78.493	ENSMOCG00000020309	Srp72	95	78.493	Microtus_ochrogaster
ENSXETG00000010205	srp72	100	71.900	ENSMMOG00000002627	srp72	95	72.057	Mola_mola
ENSXETG00000010205	srp72	97	76.651	ENSMODG00000020697	SRP72	95	77.080	Monodelphis_domestica
ENSXETG00000010205	srp72	100	73.469	ENSMALG00000003747	srp72	100	73.432	Monopterus_albus
ENSXETG00000010205	srp72	100	78.493	MGP_CAROLIEiJ_G0027323	Srp72	95	78.493	Mus_caroli
ENSXETG00000010205	srp72	100	78.493	ENSMUSG00000036323	Srp72	95	78.493	Mus_musculus
ENSXETG00000010205	srp72	100	78.807	MGP_PahariEiJ_G0017103	Srp72	94	78.807	Mus_pahari
ENSXETG00000010205	srp72	100	78.493	MGP_SPRETEiJ_G0028317	Srp72	95	78.493	Mus_spretus
ENSXETG00000010205	srp72	97	79.227	ENSMPUG00000004828	SRP72	95	79.592	Mustela_putorius_furo
ENSXETG00000010205	srp72	97	78.778	ENSMLUG00000007344	SRP72	94	79.154	Myotis_lucifugus
ENSXETG00000010205	srp72	100	78.807	ENSNGAG00000012595	Srp72	95	78.807	Nannospalax_galili
ENSXETG00000010205	srp72	100	70.330	ENSNBRG00000014492	srp72	95	70.330	Neolamprologus_brichardi
ENSXETG00000010205	srp72	97	72.816	ENSNLEG00000008806	-	100	70.155	Nomascus_leucogenys
ENSXETG00000010205	srp72	90	82.301	ENSMEUG00000005164	SRP72	85	82.143	Notamacropus_eugenii
ENSXETG00000010205	srp72	97	78.803	ENSOPRG00000012521	SRP72	95	78.807	Ochotona_princeps
ENSXETG00000010205	srp72	97	78.905	ENSODEG00000012214	SRP72	96	79.278	Octodon_degus
ENSXETG00000010205	srp72	100	73.626	ENSONIG00000001446	srp72	94	73.626	Oreochromis_niloticus
ENSXETG00000010205	srp72	97	64.412	ENSOANG00000008562	SRP72	92	64.412	Ornithorhynchus_anatinus
ENSXETG00000010205	srp72	97	79.773	ENSOCUG00000012226	SRP72	95	79.749	Oryctolagus_cuniculus
ENSXETG00000010205	srp72	100	71.586	ENSORLG00000020418	srp72	95	71.743	Oryzias_latipes
ENSXETG00000010205	srp72	100	71.429	ENSORLG00020009138	srp72	93	71.024	Oryzias_latipes_hni
ENSXETG00000010205	srp72	100	71.115	ENSORLG00015018251	srp72	95	71.272	Oryzias_latipes_hsok
ENSXETG00000010205	srp72	100	70.958	ENSOMEG00000022008	srp72	95	71.743	Oryzias_melastigma
ENSXETG00000010205	srp72	97	78.905	ENSOGAG00000003578	SRP72	95	79.278	Otolemur_garnettii
ENSXETG00000010205	srp72	97	77.939	ENSOARG00000004329	SRP72	95	78.179	Ovis_aries
ENSXETG00000010205	srp72	84	64.232	ENSPPAG00000032490	-	91	63.941	Pan_paniscus
ENSXETG00000010205	srp72	99	57.006	ENSPPAG00000011428	-	89	57.581	Pan_paniscus
ENSXETG00000010205	srp72	97	78.905	ENSPPAG00000042265	SRP72	95	79.278	Pan_paniscus
ENSXETG00000010205	srp72	97	79.227	ENSPPRG00000015991	SRP72	95	79.435	Panthera_pardus
ENSXETG00000010205	srp72	97	79.227	ENSPTIG00000018786	SRP72	95	79.435	Panthera_tigris_altaica
ENSXETG00000010205	srp72	99	59.076	ENSPTRG00000048100	-	89	59.677	Pan_troglodytes
ENSXETG00000010205	srp72	97	78.905	ENSPTRG00000048466	-	95	79.278	Pan_troglodytes
ENSXETG00000010205	srp72	84	64.045	ENSPTRG00000043609	-	91	63.704	Pan_troglodytes
ENSXETG00000010205	srp72	98	62.939	ENSPANG00000030230	-	96	63.387	Papio_anubis
ENSXETG00000010205	srp72	97	78.905	ENSPANG00000005495	SRP72	95	79.278	Papio_anubis
ENSXETG00000010205	srp72	97	81.159	ENSPSIG00000003003	SRP72	99	81.476	Pelodiscus_sinensis
ENSXETG00000010205	srp72	100	78.493	ENSPEMG00000012828	-	94	78.493	Peromyscus_maniculatus_bairdii
ENSXETG00000010205	srp72	97	79.710	ENSPCIG00000000732	SRP72	94	80.063	Phascolarctos_cinereus
ENSXETG00000010205	srp72	100	74.097	ENSPFOG00000003480	srp72	95	74.097	Poecilia_formosa
ENSXETG00000010205	srp72	100	74.097	ENSPLAG00000020122	srp72	95	74.097	Poecilia_latipinna
ENSXETG00000010205	srp72	100	73.783	ENSPMEG00000019988	srp72	100	71.528	Poecilia_mexicana
ENSXETG00000010205	srp72	100	73.626	ENSPREG00000006218	srp72	95	73.626	Poecilia_reticulata
ENSXETG00000010205	srp72	60	66.927	ENSPPYG00000009152	-	95	66.667	Pongo_abelii
ENSXETG00000010205	srp72	97	78.905	ENSPPYG00000014752	-	74	79.278	Pongo_abelii
ENSXETG00000010205	srp72	97	77.617	ENSPVAG00000005590	SRP72	95	77.865	Pteropus_vampyrus
ENSXETG00000010205	srp72	100	74.097	ENSPNYG00000001916	srp72	95	74.097	Pundamilia_nyererei
ENSXETG00000010205	srp72	100	73.940	ENSPNAG00000022424	srp72	95	73.940	Pygocentrus_nattereri
ENSXETG00000010205	srp72	100	75.981	ENSRNOG00000002100	LOC108348180	95	76.295	Rattus_norvegicus
ENSXETG00000010205	srp72	96	74.441	ENSRBIG00000042069	SRP72	98	74.766	Rhinopithecus_bieti
ENSXETG00000010205	srp72	99	61.102	ENSRBIG00000029328	-	93	61.290	Rhinopithecus_bieti
ENSXETG00000010205	srp72	97	78.905	ENSRROG00000035704	SRP72	95	79.278	Rhinopithecus_roxellana
ENSXETG00000010205	srp72	97	79.871	ENSSHAG00000000614	SRP72	94	80.220	Sarcophilus_harrisii
ENSXETG00000010205	srp72	100	73.940	ENSSFOG00015002026	srp72	95	73.940	Scleropages_formosus
ENSXETG00000010205	srp72	100	71.674	ENSSMAG00000007639	srp72	95	72.118	Scophthalmus_maximus
ENSXETG00000010205	srp72	100	74.411	ENSSDUG00000007345	srp72	94	74.725	Seriola_dumerili
ENSXETG00000010205	srp72	100	74.411	ENSSLDG00000021819	srp72	95	74.097	Seriola_lalandi_dorsalis
ENSXETG00000010205	srp72	67	79.581	ENSSARG00000005804	SRP72	65	80.151	Sorex_araneus
ENSXETG00000010205	srp72	97	80.899	ENSSPUG00000009740	SRP72	94	81.064	Sphenodon_punctatus
ENSXETG00000010205	srp72	100	73.783	ENSSPAG00000011565	srp72	95	74.097	Stegastes_partitus
ENSXETG00000010205	srp72	100	75.981	ENSSSCG00000008900	SRP72	94	75.981	Sus_scrofa
ENSXETG00000010205	srp72	97	81.059	ENSTGUG00000004767	SRP72	95	81.221	Taeniopygia_guttata
ENSXETG00000010205	srp72	100	72.214	ENSTRUG00000009831	srp72	95	72.214	Takifugu_rubripes
ENSXETG00000010205	srp72	100	73.940	ENSTNIG00000013073	srp72	94	73.940	Tetraodon_nigroviridis
ENSXETG00000010205	srp72	73	72.775	ENSTBEG00000007394	SRP72	72	73.618	Tupaia_belangeri
ENSXETG00000010205	srp72	97	78.710	ENSTTRG00000010945	SRP72	100	78.931	Tursiops_truncatus
ENSXETG00000010205	srp72	61	82.383	ENSUAMG00000001701	SRP72	100	82.461	Ursus_americanus
ENSXETG00000010205	srp72	97	79.227	ENSUMAG00000008151	SRP72	95	79.435	Ursus_maritimus
ENSXETG00000010205	srp72	97	77.939	ENSVPAG00000000458	SRP72	95	78.179	Vicugna_pacos
ENSXETG00000010205	srp72	97	79.066	ENSVVUG00000006020	SRP72	95	79.278	Vulpes_vulpes
ENSXETG00000010205	srp72	100	73.155	ENSXMAG00000018000	srp72	95	73.155	Xiphophorus_maculatus