EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000010289 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: -
Full Name: Xenopus tropicalis cleavage and polyadenylation specific factor 2 (cpsf2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12433 bases
Position: chrGL172685.1:2848331-2860763
Accession: NM_001126980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000022670	Beta-Casp	PF10996.8	4.4e-21	1	1
ENSXETP00000022670	Lactamase_B	PF00753.27	1.2e-05	1	1
ENSXETP00000022670	RMMBL	PF07521.12	8.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000022670	-	2648	-	ENSXETP00000022670	783 (aa)	-	F6YZW1

Gene Model

Click here to download ENSXETG00000010289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010289	cpsf2	100	92.082	ENSG00000165934	CPSF2	100	92.082	Homo_sapiens
ENSXETG00000010289	cpsf2	100	84.537	ENSAPOG00000001242	cpsf2	100	84.537	Acanthochromis_polyacanthus
ENSXETG00000010289	cpsf2	100	84.684	ENSACIG00000009331	cpsf2	100	84.684	Amphilophus_citrinellus
ENSXETG00000010289	cpsf2	100	84.791	ENSAOCG00000014095	cpsf2	100	84.791	Amphiprion_ocellaris
ENSXETG00000010289	cpsf2	100	84.791	ENSAPEG00000009158	cpsf2	100	84.791	Amphiprion_percula
ENSXETG00000010289	cpsf2	96	84.868	ENSATEG00000017644	cpsf2	100	83.139	Anabas_testudineus
ENSXETG00000010289	cpsf2	100	91.847	ENSAPLG00000006330	CPSF2	100	91.847	Anas_platyrhynchos
ENSXETG00000010289	cpsf2	100	92.209	ENSACAG00000009245	CPSF2	100	92.209	Anolis_carolinensis
ENSXETG00000010289	cpsf2	100	92.337	ENSANAG00000022915	CPSF2	100	92.337	Aotus_nancymaae
ENSXETG00000010289	cpsf2	100	84.244	ENSAMXG00000018696	cpsf2	100	84.244	Astyanax_mexicanus
ENSXETG00000010289	cpsf2	100	92.209	ENSBTAG00000010227	CPSF2	100	92.209	Bos_taurus
ENSXETG00000010289	cpsf2	100	41.970	WBGene00017313	cpsf-2	100	41.371	Caenorhabditis_elegans
ENSXETG00000010289	cpsf2	100	92.337	ENSCJAG00000018069	CPSF2	100	92.337	Callithrix_jacchus
ENSXETG00000010289	cpsf2	100	92.209	ENSCAFG00000010909	CPSF2	100	92.209	Canis_familiaris
ENSXETG00000010289	cpsf2	100	92.209	ENSCAFG00020020670	CPSF2	100	92.209	Canis_lupus_dingo
ENSXETG00000010289	cpsf2	100	92.209	ENSCHIG00000023848	CPSF2	100	92.209	Capra_hircus
ENSXETG00000010289	cpsf2	100	91.954	ENSTSYG00000009036	CPSF2	100	91.954	Carlito_syrichta
ENSXETG00000010289	cpsf2	100	92.209	ENSCPOG00000010899	CPSF2	100	92.209	Cavia_porcellus
ENSXETG00000010289	cpsf2	100	92.337	ENSCCAG00000028088	CPSF2	100	92.337	Cebus_capucinus
ENSXETG00000010289	cpsf2	100	92.209	ENSCATG00000030132	CPSF2	100	92.209	Cercocebus_atys
ENSXETG00000010289	cpsf2	100	92.082	ENSCLAG00000012404	CPSF2	100	92.082	Chinchilla_lanigera
ENSXETG00000010289	cpsf2	100	92.209	ENSCSAG00000011300	CPSF2	100	92.209	Chlorocebus_sabaeus
ENSXETG00000010289	cpsf2	100	86.079	ENSCHOG00000012904	CPSF2	100	86.079	Choloepus_hoffmanni
ENSXETG00000010289	cpsf2	100	91.954	ENSCPBG00000008766	CPSF2	97	91.954	Chrysemys_picta_bellii
ENSXETG00000010289	cpsf2	100	55.250	ENSCING00000007881	-	100	54.125	Ciona_intestinalis
ENSXETG00000010289	cpsf2	94	92.497	ENSCANG00000041651	CPSF2	100	92.497	Colobus_angolensis_palliatus
ENSXETG00000010289	cpsf2	100	91.954	ENSCGRG00001006901	Cpsf2	100	91.954	Cricetulus_griseus_chok1gshd
ENSXETG00000010289	cpsf2	100	91.954	ENSCGRG00000012416	Cpsf2	100	91.954	Cricetulus_griseus_crigri
ENSXETG00000010289	cpsf2	100	82.763	ENSCSEG00000004116	cpsf2	100	82.763	Cynoglossus_semilaevis
ENSXETG00000010289	cpsf2	100	83.777	ENSCVAG00000000095	cpsf2	100	83.904	Cyprinodon_variegatus
ENSXETG00000010289	cpsf2	100	83.944	ENSDARG00000028971	cpsf2	100	83.944	Danio_rerio
ENSXETG00000010289	cpsf2	100	92.209	ENSDNOG00000042757	CPSF2	100	92.209	Dasypus_novemcinctus
ENSXETG00000010289	cpsf2	100	91.826	ENSDORG00000013709	Cpsf2	100	91.826	Dipodomys_ordii
ENSXETG00000010289	cpsf2	100	52.612	FBgn0027873	Cpsf100	100	52.244	Drosophila_melanogaster
ENSXETG00000010289	cpsf2	100	83.546	ENSETEG00000012123	CPSF2	100	83.546	Echinops_telfairi
ENSXETG00000010289	cpsf2	52	75.000	ENSEBUG00000012098	cpsf2	93	75.000	Eptatretus_burgeri
ENSXETG00000010289	cpsf2	89	92.150	ENSEASG00005021193	CPSF2	100	92.150	Equus_asinus_asinus
ENSXETG00000010289	cpsf2	100	91.954	ENSECAG00000023935	CPSF2	100	91.954	Equus_caballus
ENSXETG00000010289	cpsf2	100	83.312	ENSELUG00000008442	cpsf2	100	83.312	Esox_lucius
ENSXETG00000010289	cpsf2	100	91.954	ENSFCAG00000007886	CPSF2	100	91.954	Felis_catus
ENSXETG00000010289	cpsf2	100	92.593	ENSFALG00000002412	CPSF2	100	92.593	Ficedula_albicollis
ENSXETG00000010289	cpsf2	100	92.082	ENSFDAG00000006327	CPSF2	100	92.082	Fukomys_damarensis
ENSXETG00000010289	cpsf2	96	82.682	ENSFHEG00000015465	cpsf2	98	83.290	Fundulus_heteroclitus
ENSXETG00000010289	cpsf2	100	82.472	ENSGMOG00000008761	cpsf2	100	82.472	Gadus_morhua
ENSXETG00000010289	cpsf2	100	92.082	ENSGALG00000010783	CPSF2	100	92.465	Gallus_gallus
ENSXETG00000010289	cpsf2	100	84.030	ENSGAFG00000001407	cpsf2	100	84.030	Gambusia_affinis
ENSXETG00000010289	cpsf2	100	84.411	ENSGACG00000008418	cpsf2	100	84.411	Gasterosteus_aculeatus
ENSXETG00000010289	cpsf2	100	92.082	ENSGAGG00000008287	CPSF2	100	92.082	Gopherus_agassizii
ENSXETG00000010289	cpsf2	100	92.082	ENSGGOG00000011799	CPSF2	100	92.082	Gorilla_gorilla
ENSXETG00000010289	cpsf2	100	84.157	ENSHBUG00000023466	cpsf2	100	84.157	Haplochromis_burtoni
ENSXETG00000010289	cpsf2	100	91.954	ENSHGLG00000018311	CPSF2	100	91.954	Heterocephalus_glaber_female
ENSXETG00000010289	cpsf2	100	91.954	ENSHGLG00100016460	CPSF2	100	91.954	Heterocephalus_glaber_male
ENSXETG00000010289	cpsf2	100	84.030	ENSHCOG00000019527	cpsf2	98	84.030	Hippocampus_comes
ENSXETG00000010289	cpsf2	100	84.117	ENSIPUG00000020857	cpsf2	100	84.117	Ictalurus_punctatus
ENSXETG00000010289	cpsf2	100	92.337	ENSSTOG00000009528	CPSF2	100	92.337	Ictidomys_tridecemlineatus
ENSXETG00000010289	cpsf2	100	91.826	ENSJJAG00000017925	Cpsf2	100	91.826	Jaculus_jaculus
ENSXETG00000010289	cpsf2	100	83.523	ENSKMAG00000019429	cpsf2	100	83.523	Kryptolebias_marmoratus
ENSXETG00000010289	cpsf2	95	84.070	ENSLBEG00000011585	cpsf2	100	84.225	Labrus_bergylta
ENSXETG00000010289	cpsf2	100	88.250	ENSLACG00000019024	CPSF2	100	88.761	Latimeria_chalumnae
ENSXETG00000010289	cpsf2	100	86.819	ENSLOCG00000014102	cpsf2	100	86.819	Lepisosteus_oculatus
ENSXETG00000010289	cpsf2	100	91.847	ENSLAFG00000004891	CPSF2	100	91.847	Loxodonta_africana
ENSXETG00000010289	cpsf2	100	92.209	ENSMFAG00000041212	CPSF2	100	92.209	Macaca_fascicularis
ENSXETG00000010289	cpsf2	100	92.209	ENSMMUG00000000699	CPSF2	100	92.209	Macaca_mulatta
ENSXETG00000010289	cpsf2	100	92.209	ENSMNEG00000031584	CPSF2	100	92.209	Macaca_nemestrina
ENSXETG00000010289	cpsf2	100	92.209	ENSMLEG00000029394	CPSF2	100	92.209	Mandrillus_leucophaeus
ENSXETG00000010289	cpsf2	100	84.284	ENSMAMG00000004235	cpsf2	100	84.284	Mastacembelus_armatus
ENSXETG00000010289	cpsf2	100	84.284	ENSMZEG00005001769	cpsf2	100	84.284	Maylandia_zebra
ENSXETG00000010289	cpsf2	100	92.092	ENSMGAG00000013122	CPSF2	100	92.474	Meleagris_gallopavo
ENSXETG00000010289	cpsf2	100	91.954	ENSMAUG00000015160	Cpsf2	100	91.954	Mesocricetus_auratus
ENSXETG00000010289	cpsf2	100	92.337	ENSMICG00000016441	CPSF2	100	92.337	Microcebus_murinus
ENSXETG00000010289	cpsf2	100	91.826	ENSMOCG00000015372	Cpsf2	100	91.826	Microtus_ochrogaster
ENSXETG00000010289	cpsf2	100	79.594	ENSMMOG00000015590	cpsf2	100	79.594	Mola_mola
ENSXETG00000010289	cpsf2	100	92.720	ENSMODG00000002042	CPSF2	100	92.720	Monodelphis_domestica
ENSXETG00000010289	cpsf2	100	81.622	ENSMALG00000022275	cpsf2	100	81.622	Monopterus_albus
ENSXETG00000010289	cpsf2	100	91.188	ENSMUSG00000041781	Cpsf2	100	91.188	Mus_musculus
ENSXETG00000010289	cpsf2	100	91.443	MGP_PahariEiJ_G0029791	Cpsf2	100	91.443	Mus_pahari
ENSXETG00000010289	cpsf2	100	91.188	MGP_SPRETEiJ_G0018877	Cpsf2	100	91.188	Mus_spretus
ENSXETG00000010289	cpsf2	100	92.337	ENSMPUG00000007617	CPSF2	98	92.337	Mustela_putorius_furo
ENSXETG00000010289	cpsf2	100	91.826	ENSMLUG00000005570	CPSF2	100	91.826	Myotis_lucifugus
ENSXETG00000010289	cpsf2	100	92.082	ENSNGAG00000020312	Cpsf2	100	92.082	Nannospalax_galili
ENSXETG00000010289	cpsf2	100	84.537	ENSNBRG00000022402	cpsf2	100	84.537	Neolamprologus_brichardi
ENSXETG00000010289	cpsf2	100	91.188	ENSNLEG00000017132	CPSF2	100	91.188	Nomascus_leucogenys
ENSXETG00000010289	cpsf2	91	94.822	ENSMEUG00000008138	CPSF2	91	94.822	Notamacropus_eugenii
ENSXETG00000010289	cpsf2	94	86.085	ENSOPRG00000008484	-	93	93.333	Ochotona_princeps
ENSXETG00000010289	cpsf2	100	92.082	ENSODEG00000008682	CPSF2	100	92.082	Octodon_degus
ENSXETG00000010289	cpsf2	100	84.810	ENSONIG00000005901	cpsf2	100	84.810	Oreochromis_niloticus
ENSXETG00000010289	cpsf2	100	92.337	ENSOANG00000003822	CPSF2	100	92.337	Ornithorhynchus_anatinus
ENSXETG00000010289	cpsf2	100	91.954	ENSOCUG00000005713	CPSF2	100	91.954	Oryctolagus_cuniculus
ENSXETG00000010289	cpsf2	100	78.961	ENSORLG00000011628	cpsf2	100	78.961	Oryzias_latipes
ENSXETG00000010289	cpsf2	100	84.030	ENSORLG00020016980	cpsf2	100	84.030	Oryzias_latipes_hni
ENSXETG00000010289	cpsf2	100	84.030	ENSORLG00015011910	cpsf2	100	84.030	Oryzias_latipes_hsok
ENSXETG00000010289	cpsf2	100	83.397	ENSOMEG00000022876	cpsf2	100	83.397	Oryzias_melastigma
ENSXETG00000010289	cpsf2	100	89.172	ENSOARG00000012889	CPSF2	100	89.172	Ovis_aries
ENSXETG00000010289	cpsf2	100	92.082	ENSPPAG00000039666	CPSF2	100	92.082	Pan_paniscus
ENSXETG00000010289	cpsf2	99	91.944	ENSPPRG00000010869	CPSF2	100	91.944	Panthera_pardus
ENSXETG00000010289	cpsf2	100	91.954	ENSPTIG00000021202	CPSF2	100	91.954	Panthera_tigris_altaica
ENSXETG00000010289	cpsf2	100	92.082	ENSPTRG00000006651	CPSF2	100	92.082	Pan_troglodytes
ENSXETG00000010289	cpsf2	100	92.209	ENSPANG00000017417	CPSF2	100	92.209	Papio_anubis
ENSXETG00000010289	cpsf2	100	80.432	ENSPKIG00000021453	cpsf2	100	80.432	Paramormyrops_kingsleyae
ENSXETG00000010289	cpsf2	100	91.443	ENSPSIG00000006289	CPSF2	100	91.443	Pelodiscus_sinensis
ENSXETG00000010289	cpsf2	76	80.066	ENSPMGG00000002511	cpsf2	100	80.066	Periophthalmus_magnuspinnatus
ENSXETG00000010289	cpsf2	100	91.954	ENSPEMG00000007917	Cpsf2	100	91.954	Peromyscus_maniculatus_bairdii
ENSXETG00000010289	cpsf2	100	73.864	ENSPMAG00000006205	cpsf2	100	73.864	Petromyzon_marinus
ENSXETG00000010289	cpsf2	100	92.720	ENSPCIG00000011393	CPSF2	100	92.720	Phascolarctos_cinereus
ENSXETG00000010289	cpsf2	100	83.904	ENSPFOG00000018648	cpsf2	100	83.904	Poecilia_formosa
ENSXETG00000010289	cpsf2	100	83.904	ENSPLAG00000019199	cpsf2	99	83.904	Poecilia_latipinna
ENSXETG00000010289	cpsf2	96	84.079	ENSPMEG00000012100	cpsf2	100	83.824	Poecilia_mexicana
ENSXETG00000010289	cpsf2	100	84.157	ENSPREG00000008960	cpsf2	100	84.157	Poecilia_reticulata
ENSXETG00000010289	cpsf2	63	90.744	ENSPPYG00000029685	-	100	90.744	Pongo_abelii
ENSXETG00000010289	cpsf2	100	92.082	ENSPCAG00000012477	CPSF2	100	92.082	Procavia_capensis
ENSXETG00000010289	cpsf2	100	92.082	ENSPCOG00000026387	CPSF2	100	92.082	Propithecus_coquereli
ENSXETG00000010289	cpsf2	65	93.333	ENSPVAG00000004223	CPSF2	65	93.333	Pteropus_vampyrus
ENSXETG00000010289	cpsf2	100	84.304	ENSPNYG00000023356	cpsf2	100	84.304	Pundamilia_nyererei
ENSXETG00000010289	cpsf2	100	85.133	ENSPNAG00000001849	cpsf2	100	85.133	Pygocentrus_nattereri
ENSXETG00000010289	cpsf2	100	91.699	ENSRNOG00000005733	Cpsf2	100	91.699	Rattus_norvegicus
ENSXETG00000010289	cpsf2	100	92.209	ENSRBIG00000044792	CPSF2	100	92.209	Rhinopithecus_bieti
ENSXETG00000010289	cpsf2	100	92.209	ENSRROG00000034875	CPSF2	100	92.209	Rhinopithecus_roxellana
ENSXETG00000010289	cpsf2	100	92.337	ENSSBOG00000024571	CPSF2	100	92.337	Saimiri_boliviensis_boliviensis
ENSXETG00000010289	cpsf2	100	92.593	ENSSHAG00000010458	CPSF2	100	92.593	Sarcophilus_harrisii
ENSXETG00000010289	cpsf2	100	85.896	ENSSFOG00015002117	cpsf2	100	85.896	Scleropages_formosus
ENSXETG00000010289	cpsf2	100	83.397	ENSSMAG00000002001	cpsf2	100	83.797	Scophthalmus_maximus
ENSXETG00000010289	cpsf2	100	85.425	ENSSDUG00000004084	cpsf2	100	85.425	Seriola_dumerili
ENSXETG00000010289	cpsf2	100	84.918	ENSSLDG00000024330	cpsf2	100	84.918	Seriola_lalandi_dorsalis
ENSXETG00000010289	cpsf2	58	98.020	ENSSARG00000009784	-	63	98.020	Sorex_araneus
ENSXETG00000010289	cpsf2	100	92.082	ENSSPUG00000013485	CPSF2	100	92.082	Sphenodon_punctatus
ENSXETG00000010289	cpsf2	100	84.157	ENSSPAG00000013284	cpsf2	100	84.157	Stegastes_partitus
ENSXETG00000010289	cpsf2	100	91.954	ENSSSCG00000002447	CPSF2	100	91.954	Sus_scrofa
ENSXETG00000010289	cpsf2	100	92.209	ENSTGUG00000012571	-	100	92.209	Taeniopygia_guttata
ENSXETG00000010289	cpsf2	100	84.030	ENSTRUG00000003742	cpsf2	100	84.030	Takifugu_rubripes
ENSXETG00000010289	cpsf2	100	83.439	ENSTNIG00000012228	cpsf2	100	83.944	Tetraodon_nigroviridis
ENSXETG00000010289	cpsf2	91	88.889	ENSTBEG00000004530	CPSF2	94	88.889	Tupaia_belangeri
ENSXETG00000010289	cpsf2	88	92.081	ENSTTRG00000008697	CPSF2	88	92.081	Tursiops_truncatus
ENSXETG00000010289	cpsf2	100	92.209	ENSUAMG00000028071	CPSF2	100	92.209	Ursus_americanus
ENSXETG00000010289	cpsf2	100	92.209	ENSUMAG00000005029	CPSF2	100	92.209	Ursus_maritimus
ENSXETG00000010289	cpsf2	99	92.072	ENSVPAG00000003503	CPSF2	100	92.072	Vicugna_pacos
ENSXETG00000010289	cpsf2	100	92.209	ENSVVUG00000024642	CPSF2	100	92.209	Vulpes_vulpes
ENSXETG00000010289	cpsf2	100	84.157	ENSXCOG00000001764	cpsf2	100	84.157	Xiphophorus_couchianus
ENSXETG00000010289	cpsf2	100	84.284	ENSXMAG00000017048	cpsf2	100	84.284	Xiphophorus_maculatus