EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000010413 (Gene tree)
Gene ID: -
Gene Symbol: tpd52
Alias: -
Full Name: Xenopus tropicalis tumor protein D52 (tpd52)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 85298 bases
Position: chrGL172861.1:929365-1014662
Accession: NM_001113918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000061628	MRP-S35	PF10246.9	4.4e-52	1	1
ENSXETP00000063068	MRP-S35	PF10246.9	1.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063657	-	1159	-	ENSXETP00000063068	290 (aa)	-	F7CK29
ENSXETT00000022867	-	976	-	ENSXETP00000022867	179 (aa)	-	F6ZK77
ENSXETT00000062769	-	824	-	ENSXETP00000061628	169 (aa)	-	A4IHJ5

Gene Model

Click here to download ENSXETG00000010413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010413	tpd52	84	72.358	ENSANAG00000020626	-	90	72.358	Aotus_nancymaae
ENSXETG00000010413	tpd52	84	72.764	ENSCJAG00000046659	-	90	72.764	Callithrix_jacchus
ENSXETG00000010413	tpd52	92	67.658	ENSCATG00000042819	-	98	67.658	Cercocebus_atys
ENSXETG00000010413	tpd52	88	68.182	ENSCSAG00000013394	-	95	68.182	Chlorocebus_sabaeus
ENSXETG00000010413	tpd52	90	68.679	ENSCANG00000030843	-	97	68.679	Colobus_angolensis_palliatus
ENSXETG00000010413	tpd52	90	69.057	ENSGGOG00000036769	-	95	69.318	Gorilla_gorilla
ENSXETG00000010413	tpd52	84	69.323	ENSLAFG00000013093	-	100	69.323	Loxodonta_africana
ENSXETG00000010413	tpd52	92	68.030	ENSMFAG00000031459	-	98	68.030	Macaca_fascicularis
ENSXETG00000010413	tpd52	92	68.030	ENSMMUG00000022369	TPD52	98	68.030	Macaca_mulatta
ENSXETG00000010413	tpd52	92	66.914	ENSMNEG00000029257	-	98	66.914	Macaca_nemestrina
ENSXETG00000010413	tpd52	92	67.658	ENSMLEG00000000376	-	98	67.658	Mandrillus_leucophaeus
ENSXETG00000010413	tpd52	86	71.429	ENSNLEG00000002256	-	94	71.429	Nomascus_leucogenys
ENSXETG00000010413	tpd52	90	69.318	ENSPPAG00000037473	-	95	69.318	Pan_paniscus
ENSXETG00000010413	tpd52	90	69.318	ENSPTRG00000020367	TPD52	95	69.318	Pan_troglodytes
ENSXETG00000010413	tpd52	92	67.286	ENSPANG00000025523	-	98	67.286	Papio_anubis
ENSXETG00000010413	tpd52	91	68.914	ENSRBIG00000022114	-	98	68.914	Rhinopithecus_bieti
ENSXETG00000010413	tpd52	91	68.914	ENSRROG00000041311	-	98	68.914	Rhinopithecus_roxellana
ENSXETG00000010413	tpd52	82	74.167	ENSTGUG00000011636	TPD52	98	74.167	Taeniopygia_guttata