EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000010491 (Gene tree)
Gene ID: -
Gene Symbol: pcbp2
Alias: -
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 180168 bases
Position: chrGL173129.1:492774-672941
Accession: XB-GENE-5903797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000023019	KH_1	PF00013.29	3e-54	1	3
ENSXETP00000023019	KH_1	PF00013.29	3e-54	2	3
ENSXETP00000023019	KH_1	PF00013.29	3e-54	3	3
ENSXETP00000023019	KH_2	PF07650.17	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000023019	-	3327	-	ENSXETP00000023019	455 (aa)	-	F6X1C4

Gene Model

Click here to download ENSXETG00000010491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000010491	pcbp2	74	68.820	ENSXETG00000012658	pcbp3	92	70.085
ENSXETG00000010491	pcbp2	75	35.211	ENSXETG00000001344	fubp3	64	35.211
ENSXETG00000010491	pcbp2	74	74.438	ENSXETG00000011483	pcbp1	91	74.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010491	pcbp2	77	74.504	ENSAPOG00000016582	-	93	74.504	Acanthochromis_polyacanthus
ENSXETG00000010491	pcbp2	73	74.924	ENSAPOG00000020003	pcbp3	81	74.924	Acanthochromis_polyacanthus
ENSXETG00000010491	pcbp2	74	77.586	ENSAMEG00000001697	-	93	77.586	Ailuropoda_melanoleuca
ENSXETG00000010491	pcbp2	77	74.504	ENSACIG00000010933	pcbp3	94	74.504	Amphilophus_citrinellus
ENSXETG00000010491	pcbp2	74	75.444	ENSACIG00000002739	-	90	75.444	Amphilophus_citrinellus
ENSXETG00000010491	pcbp2	70	73.252	ENSAOCG00000007806	-	97	73.252	Amphiprion_ocellaris
ENSXETG00000010491	pcbp2	75	75.811	ENSAOCG00000008592	-	92	75.811	Amphiprion_ocellaris
ENSXETG00000010491	pcbp2	74	75.148	ENSAPEG00000005209	-	90	75.148	Amphiprion_percula
ENSXETG00000010491	pcbp2	77	76.771	ENSAPEG00000008011	pcbp3	95	76.771	Amphiprion_percula
ENSXETG00000010491	pcbp2	74	74.556	ENSATEG00000009833	-	90	74.556	Anabas_testudineus
ENSXETG00000010491	pcbp2	72	78.834	ENSATEG00000015787	-	93	78.834	Anabas_testudineus
ENSXETG00000010491	pcbp2	74	75.714	ENSAPLG00000002975	-	91	75.714	Anas_platyrhynchos
ENSXETG00000010491	pcbp2	100	86.245	ENSAPLG00000008951	-	96	86.245	Anas_platyrhynchos
ENSXETG00000010491	pcbp2	74	87.870	ENSACAG00000009819	-	91	87.870	Anolis_carolinensis
ENSXETG00000010491	pcbp2	74	77.528	ENSACAG00000004607	-	94	77.528	Anolis_carolinensis
ENSXETG00000010491	pcbp2	73	61.565	ENSANAG00000030702	-	96	73.551	Aotus_nancymaae
ENSXETG00000010491	pcbp2	77	76.771	ENSACLG00000011835	pcbp3	95	76.771	Astatotilapia_calliptera
ENSXETG00000010491	pcbp2	77	73.938	ENSACLG00000003801	-	93	73.938	Astatotilapia_calliptera
ENSXETG00000010491	pcbp2	95	67.123	ENSAMXG00000001760	zgc:110045	92	66.055	Astyanax_mexicanus
ENSXETG00000010491	pcbp2	77	77.904	ENSAMXG00000003440	pcbp3	95	77.904	Astyanax_mexicanus
ENSXETG00000010491	pcbp2	72	74.847	ENSAMXG00000013588	-	92	74.847	Astyanax_mexicanus
ENSXETG00000010491	pcbp2	57	75.862	ENSCAFG00020019472	-	84	75.862	Canis_lupus_dingo
ENSXETG00000010491	pcbp2	74	77.515	ENSCSAG00000007440	-	83	77.515	Chlorocebus_sabaeus
ENSXETG00000010491	pcbp2	77	76.420	ENSCPBG00000012151	-	92	76.420	Chrysemys_picta_bellii
ENSXETG00000010491	pcbp2	100	98.985	ENSCPBG00000000733	-	96	98.985	Chrysemys_picta_bellii
ENSXETG00000010491	pcbp2	72	75.153	ENSCSEG00000000822	pcbp3	84	85.787	Cynoglossus_semilaevis
ENSXETG00000010491	pcbp2	72	66.471	ENSCSEG00000016984	-	71	90.173	Cynoglossus_semilaevis
ENSXETG00000010491	pcbp2	77	76.771	ENSCVAG00000014482	pcbp3	95	76.771	Cyprinodon_variegatus
ENSXETG00000010491	pcbp2	77	74.221	ENSCVAG00000005262	-	93	74.221	Cyprinodon_variegatus
ENSXETG00000010491	pcbp2	77	78.187	ENSDARG00000054378	pcbp3	90	84.667	Danio_rerio
ENSXETG00000010491	pcbp2	74	65.976	ENSETEG00000015988	-	91	65.976	Echinops_telfairi
ENSXETG00000010491	pcbp2	69	62.222	ENSEBUG00000016192	pcbp3	99	62.222	Eptatretus_burgeri
ENSXETG00000010491	pcbp2	100	62.284	ENSEBUG00000007485	-	96	61.134	Eptatretus_burgeri
ENSXETG00000010491	pcbp2	74	60.687	ENSEBUG00000005495	pcbp3	64	60.687	Eptatretus_burgeri
ENSXETG00000010491	pcbp2	77	77.337	ENSELUG00000003521	pcbp3	95	77.337	Esox_lucius
ENSXETG00000010491	pcbp2	77	74.788	ENSELUG00000001560	-	90	74.561	Esox_lucius
ENSXETG00000010491	pcbp2	100	91.247	ENSFALG00000004411	-	97	89.716	Ficedula_albicollis
ENSXETG00000010491	pcbp2	74	78.402	ENSFALG00000003949	-	91	78.402	Ficedula_albicollis
ENSXETG00000010491	pcbp2	74	74.556	ENSFHEG00000006539	-	90	74.556	Fundulus_heteroclitus
ENSXETG00000010491	pcbp2	75	73.314	ENSFHEG00000016615	pcbp3	92	73.314	Fundulus_heteroclitus
ENSXETG00000010491	pcbp2	74	55.618	ENSGMOG00000008611	-	94	55.618	Gadus_morhua
ENSXETG00000010491	pcbp2	76	64.481	ENSGMOG00000011992	pcbp3	92	64.754	Gadus_morhua
ENSXETG00000010491	pcbp2	74	75.843	ENSGALG00000004394	-	91	82.383	Gallus_gallus
ENSXETG00000010491	pcbp2	75	90.351	ENSGALG00000013155	-	93	89.908	Gallus_gallus
ENSXETG00000010491	pcbp2	77	74.221	ENSGAFG00000010274	-	93	74.221	Gambusia_affinis
ENSXETG00000010491	pcbp2	73	76.807	ENSGAFG00000011430	pcbp3	89	76.807	Gambusia_affinis
ENSXETG00000010491	pcbp2	74	73.446	ENSGACG00000002266	-	90	73.446	Gasterosteus_aculeatus
ENSXETG00000010491	pcbp2	74	69.492	ENSGACG00000014955	-	91	69.492	Gasterosteus_aculeatus
ENSXETG00000010491	pcbp2	57	79.899	ENSGAGG00000006956	-	80	79.899	Gopherus_agassizii
ENSXETG00000010491	pcbp2	85	88.918	ENSGAGG00000000271	-	100	88.918	Gopherus_agassizii
ENSXETG00000010491	pcbp2	77	73.938	ENSHBUG00000021782	-	93	73.938	Haplochromis_burtoni
ENSXETG00000010491	pcbp2	77	76.771	ENSHBUG00000010697	pcbp3	95	76.771	Haplochromis_burtoni
ENSXETG00000010491	pcbp2	77	76.771	ENSHCOG00000017868	pcbp3	95	76.771	Hippocampus_comes
ENSXETG00000010491	pcbp2	74	67.160	ENSHCOG00000006067	-	92	70.710	Hippocampus_comes
ENSXETG00000010491	pcbp2	62	58.962	ENSIPUG00000003914	zgc:110045	100	58.879	Ictalurus_punctatus
ENSXETG00000010491	pcbp2	74	80.769	ENSIPUG00000006238	pcbp3	93	80.769	Ictalurus_punctatus
ENSXETG00000010491	pcbp2	77	76.771	ENSKMAG00000003046	pcbp3	95	76.771	Kryptolebias_marmoratus
ENSXETG00000010491	pcbp2	77	73.938	ENSKMAG00000018530	-	93	73.938	Kryptolebias_marmoratus
ENSXETG00000010491	pcbp2	74	60.767	ENSLBEG00000006542	-	93	63.173	Labrus_bergylta
ENSXETG00000010491	pcbp2	74	73.373	ENSLBEG00000006201	pcbp3	89	73.373	Labrus_bergylta
ENSXETG00000010491	pcbp2	100	92.527	ENSLACG00000010804	zgc:110045	97	92.527	Latimeria_chalumnae
ENSXETG00000010491	pcbp2	100	69.197	ENSLACG00000010386	pcbp3	77	80.278	Latimeria_chalumnae
ENSXETG00000010491	pcbp2	74	81.361	ENSLOCG00000009369	pcbp3	93	81.361	Lepisosteus_oculatus
ENSXETG00000010491	pcbp2	100	90.330	ENSLOCG00000005058	zgc:110045	97	90.330	Lepisosteus_oculatus
ENSXETG00000010491	pcbp2	74	73.810	ENSMAMG00000022336	pcbp3	89	73.810	Mastacembelus_armatus
ENSXETG00000010491	pcbp2	74	74.852	ENSMAMG00000011620	-	90	74.852	Mastacembelus_armatus
ENSXETG00000010491	pcbp2	77	74.504	ENSMZEG00005008993	pcbp3	92	76.855	Maylandia_zebra
ENSXETG00000010491	pcbp2	75	71.137	ENSMZEG00005014882	-	93	72.012	Maylandia_zebra
ENSXETG00000010491	pcbp2	100	92.998	ENSMGAG00000006794	-	97	90.591	Meleagris_gallopavo
ENSXETG00000010491	pcbp2	75	70.028	ENSMGAG00000001883	-	94	70.950	Meleagris_gallopavo
ENSXETG00000010491	pcbp2	72	75.610	ENSMMOG00000005216	-	89	75.610	Mola_mola
ENSXETG00000010491	pcbp2	72	74.924	ENSMMOG00000000730	pcbp3	78	74.924	Mola_mola
ENSXETG00000010491	pcbp2	58	69.748	ENSMODG00000027884	-	94	69.748	Monodelphis_domestica
ENSXETG00000010491	pcbp2	75	76.316	ENSMALG00000000691	pcbp3	93	76.316	Monopterus_albus
ENSXETG00000010491	pcbp2	70	70.746	ENSMPUG00000001779	-	79	70.746	Mustela_putorius_furo
ENSXETG00000010491	pcbp2	75	76.093	ENSNBRG00000016409	-	93	76.093	Neolamprologus_brichardi
ENSXETG00000010491	pcbp2	75	74.425	ENSNBRG00000016714	-	93	74.425	Neolamprologus_brichardi
ENSXETG00000010491	pcbp2	74	74.294	ENSOPRG00000003431	-	94	74.294	Ochotona_princeps
ENSXETG00000010491	pcbp2	76	73.829	ENSONIG00000012122	-	96	73.829	Oreochromis_niloticus
ENSXETG00000010491	pcbp2	74	76.331	ENSONIG00000004611	-	93	74.790	Oreochromis_niloticus
ENSXETG00000010491	pcbp2	74	77.515	ENSOCUG00000002696	-	89	77.515	Oryctolagus_cuniculus
ENSXETG00000010491	pcbp2	74	76.190	ENSORLG00000000059	pcbp3	93	76.190	Oryzias_latipes
ENSXETG00000010491	pcbp2	78	74.576	ENSORLG00000022739	-	94	74.576	Oryzias_latipes
ENSXETG00000010491	pcbp2	78	74.576	ENSORLG00020006124	-	94	74.576	Oryzias_latipes_hni
ENSXETG00000010491	pcbp2	74	76.190	ENSORLG00020012671	pcbp3	91	76.190	Oryzias_latipes_hni
ENSXETG00000010491	pcbp2	78	74.576	ENSORLG00015008051	-	94	74.576	Oryzias_latipes_hsok
ENSXETG00000010491	pcbp2	74	76.190	ENSORLG00015000429	pcbp3	91	76.190	Oryzias_latipes_hsok
ENSXETG00000010491	pcbp2	72	74.390	ENSOMEG00000020811	pcbp3	97	74.390	Oryzias_melastigma
ENSXETG00000010491	pcbp2	74	76.923	ENSOMEG00000020162	-	90	76.923	Oryzias_melastigma
ENSXETG00000010491	pcbp2	74	73.538	ENSOGAG00000008044	-	94	73.538	Otolemur_garnettii
ENSXETG00000010491	pcbp2	55	90.909	ENSPKIG00000020913	-	84	90.909	Paramormyrops_kingsleyae
ENSXETG00000010491	pcbp2	77	74.788	ENSPKIG00000019329	pcbp3	95	74.788	Paramormyrops_kingsleyae
ENSXETG00000010491	pcbp2	85	88.660	ENSPSIG00000008350	-	100	88.660	Pelodiscus_sinensis
ENSXETG00000010491	pcbp2	74	66.856	ENSPSIG00000014970	-	91	67.422	Pelodiscus_sinensis
ENSXETG00000010491	pcbp2	77	76.705	ENSPMGG00000022383	pcbp3	95	76.705	Periophthalmus_magnuspinnatus
ENSXETG00000010491	pcbp2	52	92.529	ENSPMAG00000004637	-	93	92.529	Petromyzon_marinus
ENSXETG00000010491	pcbp2	75	64.058	ENSPMAG00000004551	pcbp3	85	64.058	Petromyzon_marinus
ENSXETG00000010491	pcbp2	74	81.361	ENSPCIG00000028092	-	93	81.361	Phascolarctos_cinereus
ENSXETG00000010491	pcbp2	72	74.041	ENSPLAG00000004074	-	84	74.041	Poecilia_latipinna
ENSXETG00000010491	pcbp2	73	73.563	ENSPLAG00000011449	pcbp3	83	73.563	Poecilia_latipinna
ENSXETG00000010491	pcbp2	75	73.761	ENSPMEG00000006653	-	93	73.761	Poecilia_mexicana
ENSXETG00000010491	pcbp2	77	76.338	ENSPMEG00000021239	pcbp3	94	76.338	Poecilia_mexicana
ENSXETG00000010491	pcbp2	72	76.220	ENSPREG00000020585	-	93	78.667	Poecilia_reticulata
ENSXETG00000010491	pcbp2	71	74.691	ENSPREG00000015736	pcbp3	90	74.691	Poecilia_reticulata
ENSXETG00000010491	pcbp2	72	75.610	ENSPNYG00000013205	-	89	75.610	Pundamilia_nyererei
ENSXETG00000010491	pcbp2	75	72.941	ENSPNYG00000012326	pcbp3	90	72.941	Pundamilia_nyererei
ENSXETG00000010491	pcbp2	62	65.116	ENSPNAG00000006838	zgc:110045	100	61.860	Pygocentrus_nattereri
ENSXETG00000010491	pcbp2	77	76.271	ENSPNAG00000008541	-	95	76.271	Pygocentrus_nattereri
ENSXETG00000010491	pcbp2	74	76.923	ENSPNAG00000015104	pcbp3	90	76.923	Pygocentrus_nattereri
ENSXETG00000010491	pcbp2	74	77.515	ENSRNOG00000001245	Pcbp3	91	77.515	Rattus_norvegicus
ENSXETG00000010491	pcbp2	74	69.143	ENSRBIG00000028177	-	92	68.750	Rhinopithecus_bieti
ENSXETG00000010491	pcbp2	74	75.833	ENSSHAG00000007890	-	91	75.833	Sarcophilus_harrisii
ENSXETG00000010491	pcbp2	77	76.771	ENSSFOG00015014706	pcbp3	94	76.771	Scleropages_formosus
ENSXETG00000010491	pcbp2	74	78.869	ENSSFOG00015010205	pcbp3	93	78.869	Scleropages_formosus
ENSXETG00000010491	pcbp2	74	76.786	ENSSFOG00015007118	-	88	76.786	Scleropages_formosus
ENSXETG00000010491	pcbp2	77	74.221	ENSSMAG00000003135	-	93	74.221	Scophthalmus_maximus
ENSXETG00000010491	pcbp2	72	75.460	ENSSMAG00000011929	pcbp3	90	75.460	Scophthalmus_maximus
ENSXETG00000010491	pcbp2	72	78.834	ENSSDUG00000011608	pcbp3	92	78.834	Seriola_dumerili
ENSXETG00000010491	pcbp2	77	71.955	ENSSDUG00000008502	-	93	71.955	Seriola_dumerili
ENSXETG00000010491	pcbp2	77	74.504	ENSSLDG00000020161	-	93	74.504	Seriola_lalandi_dorsalis
ENSXETG00000010491	pcbp2	72	78.834	ENSSLDG00000008518	pcbp3	92	78.834	Seriola_lalandi_dorsalis
ENSXETG00000010491	pcbp2	100	89.011	ENSSPUG00000013214	-	95	87.033	Sphenodon_punctatus
ENSXETG00000010491	pcbp2	77	64.023	ENSSPAG00000023341	-	93	64.023	Stegastes_partitus
ENSXETG00000010491	pcbp2	70	73.252	ENSSPAG00000004190	-	97	73.252	Stegastes_partitus
ENSXETG00000010491	pcbp2	74	82.544	ENSTGUG00000008158	-	91	82.544	Taeniopygia_guttata
ENSXETG00000010491	pcbp2	74	71.629	ENSTGUG00000003316	-	91	71.629	Taeniopygia_guttata
ENSXETG00000010491	pcbp2	77	73.654	ENSTRUG00000013604	pcbp3	81	91.573	Takifugu_rubripes
ENSXETG00000010491	pcbp2	72	75.767	ENSTRUG00000006280	-	89	75.767	Takifugu_rubripes
ENSXETG00000010491	pcbp2	74	76.966	ENSTTRG00000015075	-	94	76.966	Tursiops_truncatus
ENSXETG00000010491	pcbp2	77	76.338	ENSXCOG00000020481	pcbp3	94	76.338	Xiphophorus_couchianus
ENSXETG00000010491	pcbp2	77	76.771	ENSXMAG00000008175	pcbp3	95	76.771	Xiphophorus_maculatus
ENSXETG00000010491	pcbp2	77	74.504	ENSXMAG00000028711	-	90	78.248	Xiphophorus_maculatus