EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000010542 (Gene tree)
Gene ID: -
Gene Symbol: npm2
Alias: -
Full Name: Xenopus tropicalis nucleophosmin/nucleoplasmin 2 (npm2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 5054 bases
Position: chrGL172670.1:894558-899611
Accession: NM_001016938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063181	Nucleoplasmin	PF03066.15	2.8e-38	1	1
ENSXETP00000023115	Nucleoplasmin	PF03066.15	2.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000023115	-	802	XM_012959066	ENSXETP00000023115	200 (aa)	XP_012814520	A9UL93
ENSXETT00000060709	-	745	-	ENSXETP00000063181	181 (aa)	-	F7DW86

Gene Model

Click here to download ENSXETG00000010542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000010542	npm2	81	40.667	ENSXETG00000014472	npm3	66	44.737
ENSXETG00000010542	npm2	60	47.706	ENSXETG00000016499	-	81	48.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010542	npm2	69	48.438	ENSG00000158806	NPM2	99	46.729	Homo_sapiens
ENSXETG00000010542	npm2	98	32.804	ENSAMEG00000001239	-	99	32.804	Ailuropoda_melanoleuca
ENSXETG00000010542	npm2	91	40.704	ENSAMEG00000003542	-	51	48.673	Ailuropoda_melanoleuca
ENSXETG00000010542	npm2	99	47.000	ENSACAG00000000163	-	95	45.729	Anolis_carolinensis
ENSXETG00000010542	npm2	91	41.420	ENSANAG00000038138	-	85	49.138	Aotus_nancymaae
ENSXETG00000010542	npm2	88	37.949	ENSANAG00000028994	-	82	37.755	Aotus_nancymaae
ENSXETG00000010542	npm2	65	44.068	ENSAMXG00000001084	npm2a	83	40.299	Astyanax_mexicanus
ENSXETG00000010542	npm2	96	47.396	ENSAMXG00000038475	npm2b	99	47.938	Astyanax_mexicanus
ENSXETG00000010542	npm2	64	44.915	ENSBTAG00000046918	NPM2	60	44.915	Bos_taurus
ENSXETG00000010542	npm2	92	39.766	ENSCJAG00000020389	NPM2	85	48.276	Callithrix_jacchus
ENSXETG00000010542	npm2	93	42.708	ENSCAFG00020007666	-	90	42.424	Canis_lupus_dingo
ENSXETG00000010542	npm2	93	43.229	ENSCAFG00020015194	-	59	43.802	Canis_lupus_dingo
ENSXETG00000010542	npm2	93	41.579	ENSCAFG00020015318	-	56	41.525	Canis_lupus_dingo
ENSXETG00000010542	npm2	93	43.077	ENSCAFG00020015227	-	92	42.564	Canis_lupus_dingo
ENSXETG00000010542	npm2	64	42.017	ENSCHIG00000026056	NPM2	59	42.017	Capra_hircus
ENSXETG00000010542	npm2	61	46.018	ENSTSYG00000026275	NPM2	77	47.619	Carlito_syrichta
ENSXETG00000010542	npm2	59	45.794	ENSCAPG00000006057	NPM2	89	39.394	Cavia_aperea
ENSXETG00000010542	npm2	59	45.794	ENSCPOG00000039799	NPM2	89	39.394	Cavia_porcellus
ENSXETG00000010542	npm2	100	45.161	ENSCCAG00000035076	NPM2	99	41.784	Cebus_capucinus
ENSXETG00000010542	npm2	99	47.196	ENSCATG00000031833	NPM2	99	47.196	Cercocebus_atys
ENSXETG00000010542	npm2	62	47.826	ENSCLAG00000013600	NPM2	52	50.495	Chinchilla_lanigera
ENSXETG00000010542	npm2	92	40.936	ENSCSAG00000016588	NPM2	68	47.328	Chlorocebus_sabaeus
ENSXETG00000010542	npm2	55	42.857	ENSCHOG00000012753	-	60	50.000	Choloepus_hoffmanni
ENSXETG00000010542	npm2	99	47.664	ENSCANG00000040109	NPM2	99	47.664	Colobus_angolensis_palliatus
ENSXETG00000010542	npm2	87	46.277	ENSCGRG00001002208	Npm2	98	40.094	Cricetulus_griseus_chok1gshd
ENSXETG00000010542	npm2	87	46.277	ENSCGRG00000005105	Npm2	98	40.094	Cricetulus_griseus_crigri
ENSXETG00000010542	npm2	92	50.270	ENSDARG00000053963	npm2b	99	52.356	Danio_rerio
ENSXETG00000010542	npm2	57	45.631	ENSDARG00000076391	npm2a	73	42.373	Danio_rerio
ENSXETG00000010542	npm2	61	44.348	ENSDORG00000012371	Npm2	93	36.000	Dipodomys_ordii
ENSXETG00000010542	npm2	61	49.123	ENSEASG00005018856	NPM2	68	43.939	Equus_asinus_asinus
ENSXETG00000010542	npm2	62	48.696	ENSECAG00000024685	NPM2	60	43.939	Equus_caballus
ENSXETG00000010542	npm2	64	47.826	ENSELUG00000017306	-	88	47.826	Esox_lucius
ENSXETG00000010542	npm2	72	53.472	ENSELUG00000004822	npm2b	98	47.396	Esox_lucius
ENSXETG00000010542	npm2	63	47.458	ENSFCAG00000045117	NPM2	52	43.182	Felis_catus
ENSXETG00000010542	npm2	60	45.946	ENSFDAG00000007971	NPM2	88	40.828	Fukomys_damarensis
ENSXETG00000010542	npm2	93	59.788	ENSGALG00000050870	NPM2	100	58.500	Gallus_gallus
ENSXETG00000010542	npm2	61	48.214	ENSGALG00000054664	-	75	48.214	Gallus_gallus
ENSXETG00000010542	npm2	70	64.384	ENSGAGG00000005236	NPM2	70	65.441	Gopherus_agassizii
ENSXETG00000010542	npm2	92	41.520	ENSGGOG00000007071	NPM2	99	46.729	Gorilla_gorilla
ENSXETG00000010542	npm2	60	45.946	ENSHGLG00000006243	NPM2	92	38.693	Heterocephalus_glaber_female
ENSXETG00000010542	npm2	60	45.946	ENSHGLG00100005664	NPM2	52	44.828	Heterocephalus_glaber_male
ENSXETG00000010542	npm2	65	52.991	ENSIPUG00000013175	npm2b	66	52.991	Ictalurus_punctatus
ENSXETG00000010542	npm2	59	47.664	ENSIPUG00000010101	npm2a	75	44.915	Ictalurus_punctatus
ENSXETG00000010542	npm2	99	41.553	ENSSTOG00000013623	NPM2	99	45.161	Ictidomys_tridecemlineatus
ENSXETG00000010542	npm2	69	46.457	ENSJJAG00000018214	Npm2	61	46.154	Jaculus_jaculus
ENSXETG00000010542	npm2	87	58.427	ENSLACG00000016196	NPM2	87	57.143	Latimeria_chalumnae
ENSXETG00000010542	npm2	99	54.902	ENSLOCG00000014878	npm2b	100	54.902	Lepisosteus_oculatus
ENSXETG00000010542	npm2	99	43.779	ENSLAFG00000015584	NPM2	99	41.667	Loxodonta_africana
ENSXETG00000010542	npm2	99	47.196	ENSMFAG00000032098	NPM2	99	47.196	Macaca_fascicularis
ENSXETG00000010542	npm2	63	50.847	ENSMMUG00000002034	NPM2	85	50.847	Macaca_mulatta
ENSXETG00000010542	npm2	99	47.196	ENSMNEG00000010994	NPM2	99	47.196	Macaca_nemestrina
ENSXETG00000010542	npm2	99	47.196	ENSMLEG00000030071	NPM2	99	47.196	Mandrillus_leucophaeus
ENSXETG00000010542	npm2	99	45.327	ENSMAUG00000004228	Npm2	59	47.368	Mesocricetus_auratus
ENSXETG00000010542	npm2	70	43.056	ENSMICG00000030722	-	84	49.138	Microcebus_murinus
ENSXETG00000010542	npm2	69	48.438	ENSMOCG00000017251	Npm2	99	41.489	Microtus_ochrogaster
ENSXETG00000010542	npm2	79	48.824	ENSMODG00000009677	-	84	42.424	Monodelphis_domestica
ENSXETG00000010542	npm2	99	45.192	MGP_CAROLIEiJ_G0019492	Npm2	98	45.192	Mus_caroli
ENSXETG00000010542	npm2	99	44.712	ENSMUSG00000047911	Npm2	98	44.712	Mus_musculus
ENSXETG00000010542	npm2	99	44.498	MGP_PahariEiJ_G0030509	Npm2	98	43.541	Mus_pahari
ENSXETG00000010542	npm2	99	43.961	MGP_SPRETEiJ_G0020384	Npm2	98	43.961	Mus_spretus
ENSXETG00000010542	npm2	92	38.350	ENSMPUG00000004012	NPM2	58	43.077	Mustela_putorius_furo
ENSXETG00000010542	npm2	84	38.065	ENSMLUG00000016075	NPM2	81	37.427	Myotis_lucifugus
ENSXETG00000010542	npm2	99	43.396	ENSNGAG00000022056	Npm2	97	39.906	Nannospalax_galili
ENSXETG00000010542	npm2	92	41.520	ENSNLEG00000035765	NPM2	99	47.907	Nomascus_leucogenys
ENSXETG00000010542	npm2	83	44.382	ENSOPRG00000012940	NPM2	60	43.939	Ochotona_princeps
ENSXETG00000010542	npm2	91	45.729	ENSODEG00000006433	NPM2	91	45.729	Octodon_degus
ENSXETG00000010542	npm2	79	59.281	ENSOANG00000020262	-	74	59.394	Ornithorhynchus_anatinus
ENSXETG00000010542	npm2	98	41.063	ENSOCUG00000021756	NPM2	99	40.865	Oryctolagus_cuniculus
ENSXETG00000010542	npm2	67	46.875	ENSOGAG00000011562	NPM2	60	47.328	Otolemur_garnettii
ENSXETG00000010542	npm2	82	48.000	ENSPPAG00000040749	NPM2	99	45.070	Pan_paniscus
ENSXETG00000010542	npm2	98	40.376	ENSPPRG00000022157	NPM2	88	43.802	Panthera_pardus
ENSXETG00000010542	npm2	90	40.933	ENSPTIG00000011553	NPM2	83	49.020	Panthera_tigris_altaica
ENSXETG00000010542	npm2	82	48.000	ENSPTRG00000020045	NPM2	99	45.070	Pan_troglodytes
ENSXETG00000010542	npm2	99	47.196	ENSPANG00000031080	NPM2	99	47.196	Papio_anubis
ENSXETG00000010542	npm2	100	53.431	ENSPKIG00000009700	npm2b	99	52.451	Paramormyrops_kingsleyae
ENSXETG00000010542	npm2	61	45.045	ENSPKIG00000007241	npm2a	74	45.045	Paramormyrops_kingsleyae
ENSXETG00000010542	npm2	100	56.650	ENSPSIG00000007722	NPM2	99	55.665	Pelodiscus_sinensis
ENSXETG00000010542	npm2	99	42.381	ENSPEMG00000013368	Npm2	97	41.905	Peromyscus_maniculatus_bairdii
ENSXETG00000010542	npm2	69	46.094	ENSPCIG00000012716	-	58	46.400	Phascolarctos_cinereus
ENSXETG00000010542	npm2	92	33.929	ENSPPYG00000018408	NPM2	98	41.784	Pongo_abelii
ENSXETG00000010542	npm2	63	49.153	ENSPCOG00000018483	-	85	49.153	Propithecus_coquereli
ENSXETG00000010542	npm2	60	48.214	ENSPVAG00000009848	NPM2	55	47.826	Pteropus_vampyrus
ENSXETG00000010542	npm2	59	46.729	ENSPNAG00000018186	npm2a	78	44.068	Pygocentrus_nattereri
ENSXETG00000010542	npm2	96	51.031	ENSPNAG00000001303	npm2b	99	50.777	Pygocentrus_nattereri
ENSXETG00000010542	npm2	99	43.750	ENSRNOG00000025638	Npm2	58	48.000	Rattus_norvegicus
ENSXETG00000010542	npm2	99	48.131	ENSRBIG00000029235	NPM2	99	48.131	Rhinopithecus_bieti
ENSXETG00000010542	npm2	99	47.664	ENSRROG00000044119	NPM2	99	47.664	Rhinopithecus_roxellana
ENSXETG00000010542	npm2	98	46.729	ENSSBOG00000025301	NPM2	99	42.857	Saimiri_boliviensis_boliviensis
ENSXETG00000010542	npm2	66	51.240	ENSSFOG00015010466	npm2b	68	51.220	Scleropages_formosus
ENSXETG00000010542	npm2	73	56.164	ENSSPUG00000011509	NPM2	68	66.327	Sphenodon_punctatus
ENSXETG00000010542	npm2	62	45.217	ENSSSCG00000009610	NPM2	70	40.769	Sus_scrofa
ENSXETG00000010542	npm2	55	43.689	ENSVVUG00000007256	-	53	40.000	Vulpes_vulpes
ENSXETG00000010542	npm2	94	41.706	ENSVVUG00000021949	-	59	43.182	Vulpes_vulpes