EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000010813 (Gene tree)
Gene ID: -
Gene Symbol: poc1a
Alias: -
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 20255 bases
Position: chrGL173517.1:181647-201901
Accession: XB-GENE-5767105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000023655	eIF2A	PF08662.11	1.1e-08	1	1
ENSXETP00000062745	eIF2A	PF08662.11	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000066069	-	1362	-	ENSXETP00000062745	454 (aa)	-	F6XB57
ENSXETT00000023655	-	1323	-	ENSXETP00000023655	440 (aa)	-	F6PRG2

Gene Model

Click here to download ENSXETG00000010813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000010813	poc1a	58	33.333	ENSXETG00000009511	wdr61	94	33.333
ENSXETG00000010813	poc1a	98	54.031	ENSXETG00000021865	poc1b	90	61.176
ENSXETG00000010813	poc1a	65	32.083	ENSXETG00000019588	wdr5	91	32.895
ENSXETG00000010813	poc1a	66	32.222	ENSXETG00000004092	dcaf13	85	32.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010813	poc1a	98	62.749	ENSG00000164087	POC1A	87	75.238	Homo_sapiens
ENSXETG00000010813	poc1a	97	72.537	ENSAPOG00000002677	POC1A	96	65.155	Acanthochromis_polyacanthus
ENSXETG00000010813	poc1a	97	64.471	ENSAMEG00000009136	POC1A	97	64.471	Ailuropoda_melanoleuca
ENSXETG00000010813	poc1a	97	62.389	ENSACIG00000018288	poc1a	97	62.731	Amphilophus_citrinellus
ENSXETG00000010813	poc1a	95	66.667	ENSAOCG00000001066	POC1A	97	66.667	Amphiprion_ocellaris
ENSXETG00000010813	poc1a	97	79.139	ENSAPEG00000005795	poc1a	95	79.139	Amphiprion_percula
ENSXETG00000010813	poc1a	96	68.941	ENSAPLG00000007756	POC1A	99	68.941	Anas_platyrhynchos
ENSXETG00000010813	poc1a	98	62.192	ENSANAG00000030897	POC1A	97	65.000	Aotus_nancymaae
ENSXETG00000010813	poc1a	97	64.474	ENSACLG00000017869	POC1A	96	64.425	Astatotilapia_calliptera
ENSXETG00000010813	poc1a	68	77.592	ENSAMXG00000024703	poc1a	84	78.595	Astyanax_mexicanus
ENSXETG00000010813	poc1a	98	79.505	ENSBTAG00000001471	POC1A	96	79.505	Bos_taurus
ENSXETG00000010813	poc1a	98	62.192	ENSCJAG00000005972	POC1A	97	65.000	Callithrix_jacchus
ENSXETG00000010813	poc1a	96	64.569	ENSCAFG00020022379	POC1A	97	64.569	Canis_lupus_dingo
ENSXETG00000010813	poc1a	96	65.321	ENSCHIG00000002571	POC1A	97	65.094	Capra_hircus
ENSXETG00000010813	poc1a	97	65.268	ENSTSYG00000008302	POC1A	98	65.268	Carlito_syrichta
ENSXETG00000010813	poc1a	60	82.331	ENSCAPG00000016201	POC1A	89	82.264	Cavia_aperea
ENSXETG00000010813	poc1a	98	62.838	ENSCPOG00000006740	POC1A	97	65.238	Cavia_porcellus
ENSXETG00000010813	poc1a	98	62.416	ENSCCAG00000023380	POC1A	97	65.238	Cebus_capucinus
ENSXETG00000010813	poc1a	98	62.667	ENSCATG00000021822	POC1A	96	79.152	Cercocebus_atys
ENSXETG00000010813	poc1a	96	64.471	ENSCLAG00000010593	POC1A	97	64.471	Chinchilla_lanigera
ENSXETG00000010813	poc1a	94	63.144	ENSCSAG00000013862	POC1A	98	63.144	Chlorocebus_sabaeus
ENSXETG00000010813	poc1a	70	85.714	ENSCPBG00000016728	POC1A	98	85.714	Chrysemys_picta_bellii
ENSXETG00000010813	poc1a	95	59.259	ENSCSAVG00000008477	-	91	72.662	Ciona_savignyi
ENSXETG00000010813	poc1a	91	61.005	ENSCANG00000033064	POC1A	87	75.238	Colobus_angolensis_palliatus
ENSXETG00000010813	poc1a	97	64.789	ENSCGRG00001007357	Poc1a	98	64.789	Cricetulus_griseus_chok1gshd
ENSXETG00000010813	poc1a	97	60.659	ENSCSEG00000010287	POC1A	93	62.028	Cynoglossus_semilaevis
ENSXETG00000010813	poc1a	96	61.916	ENSCVAG00000015594	POC1A	96	61.097	Cyprinodon_variegatus
ENSXETG00000010813	poc1a	96	54.741	ENSEBUG00000002614	POC1A	92	54.957	Eptatretus_burgeri
ENSXETG00000010813	poc1a	58	57.554	ENSEBUG00000008246	POC1A	55	57.554	Eptatretus_burgeri
ENSXETG00000010813	poc1a	69	63.345	ENSEBUG00000008013	poc1a	83	63.345	Eptatretus_burgeri
ENSXETG00000010813	poc1a	97	63.801	ENSELUG00000015504	poc1a	96	82.979	Esox_lucius
ENSXETG00000010813	poc1a	96	65.558	ENSFCAG00000015704	POC1A	97	65.558	Felis_catus
ENSXETG00000010813	poc1a	97	67.213	ENSFALG00000008922	POC1A	98	67.213	Ficedula_albicollis
ENSXETG00000010813	poc1a	98	63.288	ENSFDAG00000011606	POC1A	97	65.952	Fukomys_damarensis
ENSXETG00000010813	poc1a	97	60.259	ENSFHEG00000015504	POC1A	95	76.596	Fundulus_heteroclitus
ENSXETG00000010813	poc1a	96	67.376	ENSGALG00000034572	-	89	77.500	Gallus_gallus
ENSXETG00000010813	poc1a	97	63.575	ENSGACG00000007015	poc1a	95	64.929	Gasterosteus_aculeatus
ENSXETG00000010813	poc1a	96	69.811	ENSGAGG00000014637	POC1A	98	69.811	Gopherus_agassizii
ENSXETG00000010813	poc1a	98	62.749	ENSGGOG00000006652	POC1A	87	75.238	Gorilla_gorilla
ENSXETG00000010813	poc1a	98	62.613	ENSHGLG00000013436	POC1A	97	65.238	Heterocephalus_glaber_female
ENSXETG00000010813	poc1a	98	62.613	ENSHGLG00100003479	POC1A	98	65.238	Heterocephalus_glaber_male
ENSXETG00000010813	poc1a	98	62.838	ENSIPUG00000001227	POC1A	94	75.601	Ictalurus_punctatus
ENSXETG00000010813	poc1a	98	62.556	ENSSTOG00000002638	POC1A	88	73.885	Ictidomys_tridecemlineatus
ENSXETG00000010813	poc1a	98	63.964	ENSJJAG00000018739	Poc1a	97	65.952	Jaculus_jaculus
ENSXETG00000010813	poc1a	82	75.896	ENSLBEG00000016119	POC1A	97	62.366	Labrus_bergylta
ENSXETG00000010813	poc1a	98	68.764	ENSLACG00000018788	POC1A	90	82.903	Latimeria_chalumnae
ENSXETG00000010813	poc1a	98	69.300	ENSLOCG00000013801	poc1a	97	70.345	Lepisosteus_oculatus
ENSXETG00000010813	poc1a	95	60.427	ENSLAFG00000028434	POC1A	99	70.903	Loxodonta_africana
ENSXETG00000010813	poc1a	94	62.887	ENSMFAG00000001970	POC1A	98	62.887	Macaca_fascicularis
ENSXETG00000010813	poc1a	98	62.667	ENSMMUG00000012485	POC1A	97	64.762	Macaca_mulatta
ENSXETG00000010813	poc1a	94	62.887	ENSMNEG00000042811	POC1A	98	62.887	Macaca_nemestrina
ENSXETG00000010813	poc1a	94	62.887	ENSMLEG00000039574	POC1A	87	74.921	Mandrillus_leucophaeus
ENSXETG00000010813	poc1a	96	62.132	ENSMAMG00000014233	POC1A	97	62.937	Mastacembelus_armatus
ENSXETG00000010813	poc1a	97	64.474	ENSMZEG00005013503	POC1A	96	64.425	Maylandia_zebra
ENSXETG00000010813	poc1a	98	65.044	ENSMGAG00000001628	POC1A	98	65.044	Meleagris_gallopavo
ENSXETG00000010813	poc1a	98	63.288	ENSMAUG00000017403	Poc1a	98	65.094	Mesocricetus_auratus
ENSXETG00000010813	poc1a	95	66.033	ENSMICG00000002709	POC1A	97	66.033	Microcebus_murinus
ENSXETG00000010813	poc1a	91	65.000	ENSMOCG00000003396	Poc1a	99	65.000	Microtus_ochrogaster
ENSXETG00000010813	poc1a	97	78.369	ENSMMOG00000010427	poc1a	92	78.369	Mola_mola
ENSXETG00000010813	poc1a	91	65.500	ENSMODG00000011717	POC1A	96	65.500	Monodelphis_domestica
ENSXETG00000010813	poc1a	68	78.073	ENSMALG00000009054	poc1a	81	79.070	Monopterus_albus
ENSXETG00000010813	poc1a	95	66.667	MGP_CAROLIEiJ_G0032617	Poc1a	97	66.667	Mus_caroli
ENSXETG00000010813	poc1a	95	66.667	ENSMUSG00000023345	Poc1a	99	71.812	Mus_musculus
ENSXETG00000010813	poc1a	98	63.596	MGP_PahariEiJ_G0015485	Poc1a	87	76.623	Mus_pahari
ENSXETG00000010813	poc1a	95	66.667	MGP_SPRETEiJ_G0033763	Poc1a	97	66.667	Mus_spretus
ENSXETG00000010813	poc1a	96	64.846	ENSMPUG00000011723	POC1A	97	64.846	Mustela_putorius_furo
ENSXETG00000010813	poc1a	95	66.905	ENSMLUG00000015092	POC1A	89	66.905	Myotis_lucifugus
ENSXETG00000010813	poc1a	98	63.063	ENSNGAG00000005212	Poc1a	97	65.714	Nannospalax_galili
ENSXETG00000010813	poc1a	96	62.754	ENSNBRG00000022135	poc1a	95	64.371	Neolamprologus_brichardi
ENSXETG00000010813	poc1a	94	63.660	ENSNLEG00000007084	POC1A	87	74.921	Nomascus_leucogenys
ENSXETG00000010813	poc1a	64	67.616	ENSMEUG00000007715	-	71	68.551	Notamacropus_eugenii
ENSXETG00000010813	poc1a	97	61.446	ENSOPRG00000008831	POC1A	89	62.690	Ochotona_princeps
ENSXETG00000010813	poc1a	98	63.288	ENSODEG00000018290	POC1A	98	65.476	Octodon_degus
ENSXETG00000010813	poc1a	97	63.191	ENSONIG00000014378	POC1A	97	62.309	Oreochromis_niloticus
ENSXETG00000010813	poc1a	94	63.144	ENSOCUG00000002080	POC1A	98	63.144	Oryctolagus_cuniculus
ENSXETG00000010813	poc1a	97	62.031	ENSOMEG00000019834	POC1A	96	62.281	Oryzias_melastigma
ENSXETG00000010813	poc1a	97	61.253	ENSOGAG00000032245	POC1A	99	61.253	Otolemur_garnettii
ENSXETG00000010813	poc1a	96	65.321	ENSOARG00000006352	POC1A	97	65.094	Ovis_aries
ENSXETG00000010813	poc1a	94	63.660	ENSPPAG00000043583	POC1A	87	75.238	Pan_paniscus
ENSXETG00000010813	poc1a	96	65.558	ENSPPRG00000003365	POC1A	97	65.558	Panthera_pardus
ENSXETG00000010813	poc1a	91	61.165	ENSPTIG00000005388	POC1A	98	63.660	Panthera_tigris_altaica
ENSXETG00000010813	poc1a	94	63.660	ENSPTRG00000014989	POC1A	87	75.238	Pan_troglodytes
ENSXETG00000010813	poc1a	70	82.258	ENSPSIG00000014809	POC1A	88	83.548	Pelodiscus_sinensis
ENSXETG00000010813	poc1a	97	77.483	ENSPMGG00000005356	poc1a	95	65.072	Periophthalmus_magnuspinnatus
ENSXETG00000010813	poc1a	90	65.152	ENSPEMG00000024131	Poc1a	94	76.974	Peromyscus_maniculatus_bairdii
ENSXETG00000010813	poc1a	98	63.326	ENSPMAG00000000333	poc1a	98	63.326	Petromyzon_marinus
ENSXETG00000010813	poc1a	98	63.596	ENSPCIG00000018160	POC1A	98	65.491	Phascolarctos_cinereus
ENSXETG00000010813	poc1a	98	62.971	ENSPPYG00000013816	POC1A	97	65.476	Pongo_abelii
ENSXETG00000010813	poc1a	98	64.286	ENSPCAG00000002118	POC1A	97	65.796	Procavia_capensis
ENSXETG00000010813	poc1a	88	64.010	ENSPCOG00000012625	POC1A	86	76.375	Propithecus_coquereli
ENSXETG00000010813	poc1a	72	64.353	ENSPVAG00000012480	POC1A	78	64.353	Pteropus_vampyrus
ENSXETG00000010813	poc1a	96	66.588	ENSPNYG00000019517	poc1a	97	66.588	Pundamilia_nyererei
ENSXETG00000010813	poc1a	97	68.981	ENSPNAG00000007556	POC1A	96	68.981	Pygocentrus_nattereri
ENSXETG00000010813	poc1a	89	62.245	ENSRNOG00000037295	Poc1a	99	62.245	Rattus_norvegicus
ENSXETG00000010813	poc1a	91	61.111	ENSRBIG00000031748	POC1A	87	75.238	Rhinopithecus_bieti
ENSXETG00000010813	poc1a	91	61.259	ENSRROG00000044472	POC1A	87	75.238	Rhinopithecus_roxellana
ENSXETG00000010813	poc1a	94	63.660	ENSSBOG00000027902	POC1A	98	63.660	Saimiri_boliviensis_boliviensis
ENSXETG00000010813	poc1a	97	63.122	ENSSMAG00000013505	POC1A	95	64.524	Scophthalmus_maximus
ENSXETG00000010813	poc1a	97	62.832	ENSSDUG00000016161	POC1A	96	63.778	Seriola_dumerili
ENSXETG00000010813	poc1a	96	78.397	ENSSLDG00000003828	POC1A	94	80.496	Seriola_lalandi_dorsalis
ENSXETG00000010813	poc1a	85	74.839	ENSSPUG00000008656	POC1A	99	63.303	Sphenodon_punctatus
ENSXETG00000010813	poc1a	95	53.938	ENSSPAG00000020330	POC1A	92	53.938	Stegastes_partitus
ENSXETG00000010813	poc1a	96	64.846	ENSSSCG00000011426	POC1A	97	64.846	Sus_scrofa
ENSXETG00000010813	poc1a	96	67.139	ENSTGUG00000006036	POC1A	99	67.139	Taeniopygia_guttata
ENSXETG00000010813	poc1a	97	74.468	ENSTRUG00000007900	POC1A	96	77.652	Takifugu_rubripes
ENSXETG00000010813	poc1a	98	57.233	ENSTNIG00000014818	POC1A	98	68.987	Tetraodon_nigroviridis
ENSXETG00000010813	poc1a	95	63.333	ENSTTRG00000016798	POC1A	90	73.651	Tursiops_truncatus
ENSXETG00000010813	poc1a	98	62.444	ENSUAMG00000020816	POC1A	91	74.453	Ursus_americanus
ENSXETG00000010813	poc1a	91	60.526	ENSUMAG00000021482	POC1A	98	63.077	Ursus_maritimus