EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000010882 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: -
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 6991 bases
Position: chrGL173560.1:429-7419
Accession: XB-GENE-1009901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000023798	RNA_pol_A_bac	PF01000.26	2e-29	1	1
ENSXETP00000023798	RNA_pol_L	PF01193.24	6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000023798	-	1578	-	ENSXETP00000023798	347 (aa)	-	F6QAF1

Gene Model

Click here to download ENSXETG00000010882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000010882	polr1c	57	30.348	ENSXETG00000013784	polr2c	69	30.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010882	polr1c	100	77.522	ENSG00000171453	POLR1C	100	79.839	Homo_sapiens
ENSXETG00000010882	polr1c	99	68.286	ENSAPOG00000024356	polr1c	99	68.857	Acanthochromis_polyacanthus
ENSXETG00000010882	polr1c	100	76.657	ENSAMEG00000012205	POLR1C	99	76.657	Ailuropoda_melanoleuca
ENSXETG00000010882	polr1c	95	57.831	ENSACIG00000016268	polr1c	91	59.159	Amphilophus_citrinellus
ENSXETG00000010882	polr1c	99	68.000	ENSAOCG00000011687	polr1c	96	68.571	Amphiprion_ocellaris
ENSXETG00000010882	polr1c	99	68.000	ENSAPEG00000002433	polr1c	99	68.571	Amphiprion_percula
ENSXETG00000010882	polr1c	99	68.857	ENSATEG00000005985	polr1c	99	69.516	Anabas_testudineus
ENSXETG00000010882	polr1c	86	75.920	ENSAPLG00000002908	POLR1C	99	75.920	Anas_platyrhynchos
ENSXETG00000010882	polr1c	89	74.675	ENSACAG00000009764	POLR1C	88	74.675	Anolis_carolinensis
ENSXETG00000010882	polr1c	100	77.233	ENSANAG00000025805	POLR1C	99	77.233	Aotus_nancymaae
ENSXETG00000010882	polr1c	99	67.341	ENSACLG00000006573	polr1c	98	68.588	Astatotilapia_calliptera
ENSXETG00000010882	polr1c	100	69.253	ENSAMXG00000012062	polr1c	99	69.253	Astyanax_mexicanus
ENSXETG00000010882	polr1c	100	75.793	ENSBTAG00000018969	POLR1C	100	75.793	Bos_taurus
ENSXETG00000010882	polr1c	97	47.727	WBGene00019275	rpac-40	94	47.727	Caenorhabditis_elegans
ENSXETG00000010882	polr1c	100	77.522	ENSCJAG00000005594	POLR1C	100	77.522	Callithrix_jacchus
ENSXETG00000010882	polr1c	100	76.945	ENSCAFG00000001872	POLR1C	100	76.945	Canis_familiaris
ENSXETG00000010882	polr1c	100	76.945	ENSCAFG00020012018	POLR1C	100	76.945	Canis_lupus_dingo
ENSXETG00000010882	polr1c	100	76.437	ENSCHIG00000004352	POLR1C	100	76.437	Capra_hircus
ENSXETG00000010882	polr1c	100	77.522	ENSTSYG00000011921	POLR1C	100	77.522	Carlito_syrichta
ENSXETG00000010882	polr1c	86	77.000	ENSCAPG00000015364	POLR1C	88	77.000	Cavia_aperea
ENSXETG00000010882	polr1c	100	76.369	ENSCPOG00000038098	POLR1C	100	76.369	Cavia_porcellus
ENSXETG00000010882	polr1c	100	77.522	ENSCCAG00000020169	POLR1C	100	77.522	Cebus_capucinus
ENSXETG00000010882	polr1c	100	77.522	ENSCATG00000044045	POLR1C	100	77.522	Cercocebus_atys
ENSXETG00000010882	polr1c	100	76.657	ENSCLAG00000009266	POLR1C	100	76.657	Chinchilla_lanigera
ENSXETG00000010882	polr1c	100	76.657	ENSCSAG00000011913	POLR1C	100	76.657	Chlorocebus_sabaeus
ENSXETG00000010882	polr1c	61	76.056	ENSCHOG00000006601	POLR1C	100	76.056	Choloepus_hoffmanni
ENSXETG00000010882	polr1c	100	75.793	ENSCPBG00000025203	POLR1C	100	75.793	Chrysemys_picta_bellii
ENSXETG00000010882	polr1c	98	54.678	ENSCING00000003563	-	98	54.678	Ciona_intestinalis
ENSXETG00000010882	polr1c	57	31.527	ENSCSAVG00000002167	-	69	31.527	Ciona_savignyi
ENSXETG00000010882	polr1c	100	77.233	ENSCANG00000043167	POLR1C	100	77.233	Colobus_angolensis_palliatus
ENSXETG00000010882	polr1c	100	76.945	ENSCGRG00001017533	Polr1c	100	76.945	Cricetulus_griseus_chok1gshd
ENSXETG00000010882	polr1c	86	78.000	ENSCGRG00000013225	Polr1c	100	78.000	Cricetulus_griseus_crigri
ENSXETG00000010882	polr1c	99	68.713	ENSCSEG00000018097	polr1c	98	68.713	Cynoglossus_semilaevis
ENSXETG00000010882	polr1c	61	67.606	ENSCVAG00000005684	polr1c	90	66.372	Cyprinodon_variegatus
ENSXETG00000010882	polr1c	100	70.690	ENSDARG00000039400	polr1c	96	70.690	Danio_rerio
ENSXETG00000010882	polr1c	100	76.369	ENSDNOG00000042693	POLR1C	100	76.369	Dasypus_novemcinctus
ENSXETG00000010882	polr1c	100	76.369	ENSDORG00000000429	Polr1c	100	76.369	Dipodomys_ordii
ENSXETG00000010882	polr1c	90	54.603	FBgn0031657	CG3756	93	54.603	Drosophila_melanogaster
ENSXETG00000010882	polr1c	100	74.063	ENSETEG00000010807	POLR1C	100	74.063	Echinops_telfairi
ENSXETG00000010882	polr1c	99	68.406	ENSEBUG00000013725	polr1c	99	68.406	Eptatretus_burgeri
ENSXETG00000010882	polr1c	100	76.081	ENSEASG00005003338	POLR1C	100	76.081	Equus_asinus_asinus
ENSXETG00000010882	polr1c	100	76.657	ENSECAG00000023516	POLR1C	98	76.657	Equus_caballus
ENSXETG00000010882	polr1c	100	76.945	ENSEEUG00000005471	POLR1C	100	76.945	Erinaceus_europaeus
ENSXETG00000010882	polr1c	99	69.364	ENSELUG00000013027	polr1c	99	69.364	Esox_lucius
ENSXETG00000010882	polr1c	100	75.793	ENSFCAG00000009735	POLR1C	100	75.793	Felis_catus
ENSXETG00000010882	polr1c	93	75.617	ENSFALG00000012111	POLR1C	100	75.617	Ficedula_albicollis
ENSXETG00000010882	polr1c	52	30.055	ENSFDAG00000008641	POLR2C	64	30.055	Fukomys_damarensis
ENSXETG00000010882	polr1c	100	76.081	ENSFDAG00000008428	POLR1C	100	76.081	Fukomys_damarensis
ENSXETG00000010882	polr1c	100	57.184	ENSFHEG00000000262	polr1c	100	57.184	Fundulus_heteroclitus
ENSXETG00000010882	polr1c	93	70.154	ENSGMOG00000013878	polr1c	100	70.154	Gadus_morhua
ENSXETG00000010882	polr1c	100	74.352	ENSGALG00000010349	POLR1C	100	74.352	Gallus_gallus
ENSXETG00000010882	polr1c	100	67.330	ENSGAFG00000010153	polr1c	100	67.989	Gambusia_affinis
ENSXETG00000010882	polr1c	98	67.536	ENSGACG00000002453	polr1c	98	68.116	Gasterosteus_aculeatus
ENSXETG00000010882	polr1c	100	76.081	ENSGAGG00000010640	POLR1C	100	76.081	Gopherus_agassizii
ENSXETG00000010882	polr1c	100	77.522	ENSGGOG00000010903	POLR1C	100	77.522	Gorilla_gorilla
ENSXETG00000010882	polr1c	99	61.696	ENSHBUG00000017816	polr1c	98	61.696	Haplochromis_burtoni
ENSXETG00000010882	polr1c	100	75.793	ENSHGLG00000019441	POLR1C	100	76.628	Heterocephalus_glaber_female
ENSXETG00000010882	polr1c	100	76.081	ENSHGLG00100005970	POLR1C	100	76.628	Heterocephalus_glaber_male
ENSXETG00000010882	polr1c	99	65.230	ENSHCOG00000002179	polr1c	99	65.230	Hippocampus_comes
ENSXETG00000010882	polr1c	99	72.093	ENSIPUG00000024464	polr1c	99	72.093	Ictalurus_punctatus
ENSXETG00000010882	polr1c	50	32.000	ENSSTOG00000031354	-	60	32.000	Ictidomys_tridecemlineatus
ENSXETG00000010882	polr1c	100	76.945	ENSSTOG00000010631	POLR1C	100	76.945	Ictidomys_tridecemlineatus
ENSXETG00000010882	polr1c	100	77.233	ENSJJAG00000023110	Polr1c	100	77.233	Jaculus_jaculus
ENSXETG00000010882	polr1c	99	66.857	ENSKMAG00000014305	polr1c	97	66.857	Kryptolebias_marmoratus
ENSXETG00000010882	polr1c	99	67.429	ENSLBEG00000014925	polr1c	99	68.000	Labrus_bergylta
ENSXETG00000010882	polr1c	95	57.357	ENSLACG00000012567	POLR1C	98	57.357	Latimeria_chalumnae
ENSXETG00000010882	polr1c	100	72.126	ENSLOCG00000016710	polr1c	96	72.126	Lepisosteus_oculatus
ENSXETG00000010882	polr1c	87	77.483	ENSLAFG00000026248	POLR1C	100	77.483	Loxodonta_africana
ENSXETG00000010882	polr1c	100	77.233	ENSMFAG00000046295	POLR1C	100	77.233	Macaca_fascicularis
ENSXETG00000010882	polr1c	100	77.233	ENSMMUG00000015192	POLR1C	100	77.233	Macaca_mulatta
ENSXETG00000010882	polr1c	100	77.233	ENSMNEG00000028073	POLR1C	100	77.233	Macaca_nemestrina
ENSXETG00000010882	polr1c	100	77.233	ENSMLEG00000034818	POLR1C	100	77.233	Mandrillus_leucophaeus
ENSXETG00000010882	polr1c	99	68.857	ENSMAMG00000008700	polr1c	99	68.857	Mastacembelus_armatus
ENSXETG00000010882	polr1c	99	67.052	ENSMZEG00005018545	polr1c	98	68.300	Maylandia_zebra
ENSXETG00000010882	polr1c	84	71.575	ENSMGAG00000011020	POLR1C	100	71.575	Meleagris_gallopavo
ENSXETG00000010882	polr1c	100	77.810	ENSMAUG00000014329	Polr1c	100	77.810	Mesocricetus_auratus
ENSXETG00000010882	polr1c	100	75.504	ENSMICG00000005027	POLR1C	100	75.504	Microcebus_murinus
ENSXETG00000010882	polr1c	100	77.233	ENSMOCG00000017549	Polr1c	100	77.233	Microtus_ochrogaster
ENSXETG00000010882	polr1c	98	57.771	ENSMMOG00000005380	polr1c	98	57.771	Mola_mola
ENSXETG00000010882	polr1c	84	78.082	ENSMODG00000018964	POLR1C	100	78.082	Monodelphis_domestica
ENSXETG00000010882	polr1c	99	58.092	ENSMALG00000011711	polr1c	99	58.092	Monopterus_albus
ENSXETG00000010882	polr1c	100	69.164	MGP_CAROLIEiJ_G0021662	Polr1c	100	78.161	Mus_caroli
ENSXETG00000010882	polr1c	100	77.810	ENSMUSG00000067148	Polr1c	100	78.161	Mus_musculus
ENSXETG00000010882	polr1c	100	78.098	MGP_PahariEiJ_G0020654	Polr1c	100	78.544	Mus_pahari
ENSXETG00000010882	polr1c	100	77.810	MGP_SPRETEiJ_G0022574	Polr1c	100	78.161	Mus_spretus
ENSXETG00000010882	polr1c	100	77.233	ENSMPUG00000012916	POLR1C	91	77.233	Mustela_putorius_furo
ENSXETG00000010882	polr1c	100	77.522	ENSMLUG00000017751	POLR1C	99	77.522	Myotis_lucifugus
ENSXETG00000010882	polr1c	100	76.945	ENSNGAG00000023487	Polr1c	100	78.425	Nannospalax_galili
ENSXETG00000010882	polr1c	99	67.341	ENSNBRG00000018742	polr1c	98	68.588	Neolamprologus_brichardi
ENSXETG00000010882	polr1c	100	77.522	ENSNLEG00000004035	POLR1C	100	77.522	Nomascus_leucogenys
ENSXETG00000010882	polr1c	100	65.130	ENSMEUG00000006778	POLR1C	100	65.130	Notamacropus_eugenii
ENSXETG00000010882	polr1c	77	75.746	ENSOPRG00000000145	POLR1C	99	75.746	Ochotona_princeps
ENSXETG00000010882	polr1c	63	76.037	ENSODEG00000017109	-	99	76.037	Octodon_degus
ENSXETG00000010882	polr1c	100	76.081	ENSODEG00000015831	-	100	76.081	Octodon_degus
ENSXETG00000010882	polr1c	99	67.630	ENSONIG00000013133	polr1c	97	68.876	Oreochromis_niloticus
ENSXETG00000010882	polr1c	100	74.640	ENSOANG00000003043	POLR1C	100	74.640	Ornithorhynchus_anatinus
ENSXETG00000010882	polr1c	100	77.810	ENSOCUG00000005504	POLR1C	99	77.810	Oryctolagus_cuniculus
ENSXETG00000010882	polr1c	99	65.043	ENSORLG00000019743	polr1c	99	65.043	Oryzias_latipes
ENSXETG00000010882	polr1c	65	56.522	ENSORLG00020005555	polr1c	68	56.522	Oryzias_latipes_hni
ENSXETG00000010882	polr1c	99	65.903	ENSORLG00020006489	POLR1C	99	65.903	Oryzias_latipes_hni
ENSXETG00000010882	polr1c	99	65.330	ENSORLG00015013322	polr1c	99	65.330	Oryzias_latipes_hsok
ENSXETG00000010882	polr1c	99	65.706	ENSOMEG00000016527	polr1c	99	65.706	Oryzias_melastigma
ENSXETG00000010882	polr1c	57	30.198	ENSOGAG00000016866	POLR2C	69	30.198	Otolemur_garnettii
ENSXETG00000010882	polr1c	100	76.504	ENSOGAG00000016318	POLR1C	100	76.504	Otolemur_garnettii
ENSXETG00000010882	polr1c	100	76.081	ENSOARG00000007503	POLR1C	100	76.081	Ovis_aries
ENSXETG00000010882	polr1c	100	77.522	ENSPPAG00000043678	POLR1C	100	77.522	Pan_paniscus
ENSXETG00000010882	polr1c	100	76.081	ENSPPRG00000009760	POLR1C	100	76.081	Panthera_pardus
ENSXETG00000010882	polr1c	100	76.081	ENSPTIG00000014813	POLR1C	100	76.081	Panthera_tigris_altaica
ENSXETG00000010882	polr1c	100	77.522	ENSPTRG00000018202	POLR1C	100	77.522	Pan_troglodytes
ENSXETG00000010882	polr1c	100	77.522	ENSPANG00000009025	POLR1C	99	77.522	Papio_anubis
ENSXETG00000010882	polr1c	99	71.720	ENSPKIG00000009858	polr1c	99	71.720	Paramormyrops_kingsleyae
ENSXETG00000010882	polr1c	100	76.369	ENSPSIG00000012580	POLR1C	94	76.369	Pelodiscus_sinensis
ENSXETG00000010882	polr1c	50	31.638	ENSPSIG00000016112	POLR2C	61	31.638	Pelodiscus_sinensis
ENSXETG00000010882	polr1c	99	58.092	ENSPMGG00000012121	polr1c	99	58.092	Periophthalmus_magnuspinnatus
ENSXETG00000010882	polr1c	100	78.098	ENSPEMG00000006970	Polr1c	100	78.098	Peromyscus_maniculatus_bairdii
ENSXETG00000010882	polr1c	98	69.186	ENSPMAG00000005560	polr1c	98	69.186	Petromyzon_marinus
ENSXETG00000010882	polr1c	100	76.369	ENSPCIG00000028137	POLR1C	98	76.369	Phascolarctos_cinereus
ENSXETG00000010882	polr1c	100	67.045	ENSPFOG00000014357	polr1c	98	67.705	Poecilia_formosa
ENSXETG00000010882	polr1c	100	67.045	ENSPFOG00000014342	POLR1C	100	67.705	Poecilia_formosa
ENSXETG00000010882	polr1c	61	67.136	ENSPLAG00000004111	polr1c	99	62.917	Poecilia_latipinna
ENSXETG00000010882	polr1c	100	67.045	ENSPMEG00000011877	-	100	67.705	Poecilia_mexicana
ENSXETG00000010882	polr1c	100	67.045	ENSPMEG00000008420	polr1c	100	67.705	Poecilia_mexicana
ENSXETG00000010882	polr1c	100	67.816	ENSPREG00000007985	polr1c	100	67.816	Poecilia_reticulata
ENSXETG00000010882	polr1c	100	77.522	ENSPPYG00000016645	POLR1C	100	77.522	Pongo_abelii
ENSXETG00000010882	polr1c	100	76.081	ENSPCOG00000024628	POLR1C	100	76.081	Propithecus_coquereli
ENSXETG00000010882	polr1c	100	69.741	ENSPVAG00000005689	POLR1C	100	69.741	Pteropus_vampyrus
ENSXETG00000010882	polr1c	99	67.341	ENSPNYG00000003620	polr1c	98	68.588	Pundamilia_nyererei
ENSXETG00000010882	polr1c	100	70.690	ENSPNAG00000008443	polr1c	100	70.690	Pygocentrus_nattereri
ENSXETG00000010882	polr1c	100	77.522	ENSRNOG00000019079	Polr1c	100	77.778	Rattus_norvegicus
ENSXETG00000010882	polr1c	100	77.233	ENSRBIG00000007155	POLR1C	100	77.233	Rhinopithecus_bieti
ENSXETG00000010882	polr1c	100	77.522	ENSRROG00000000257	POLR1C	100	77.522	Rhinopithecus_roxellana
ENSXETG00000010882	polr1c	90	48.580	YPR110C	RPC40	94	48.580	Saccharomyces_cerevisiae
ENSXETG00000010882	polr1c	100	77.522	ENSSBOG00000025735	POLR1C	99	75.974	Saimiri_boliviensis_boliviensis
ENSXETG00000010882	polr1c	100	70.317	ENSSHAG00000014456	POLR1C	100	70.317	Sarcophilus_harrisii
ENSXETG00000010882	polr1c	100	72.414	ENSSFOG00015019860	polr1c	100	72.414	Scleropages_formosus
ENSXETG00000010882	polr1c	99	68.786	ENSSMAG00000018865	polr1c	99	68.786	Scophthalmus_maximus
ENSXETG00000010882	polr1c	99	68.000	ENSSDUG00000015745	polr1c	91	68.571	Seriola_dumerili
ENSXETG00000010882	polr1c	99	67.714	ENSSLDG00000018285	polr1c	91	68.286	Seriola_lalandi_dorsalis
ENSXETG00000010882	polr1c	99	72.174	ENSSPUG00000011822	POLR1C	99	72.174	Sphenodon_punctatus
ENSXETG00000010882	polr1c	99	68.000	ENSSPAG00000022369	polr1c	99	68.571	Stegastes_partitus
ENSXETG00000010882	polr1c	100	76.657	ENSSSCG00000028007	POLR1C	99	76.657	Sus_scrofa
ENSXETG00000010882	polr1c	96	74.775	ENSTGUG00000009159	POLR1C	99	74.775	Taeniopygia_guttata
ENSXETG00000010882	polr1c	99	65.330	ENSTRUG00000006264	polr1c	99	65.330	Takifugu_rubripes
ENSXETG00000010882	polr1c	52	77.095	ENSTBEG00000002254	POLR1C	100	77.095	Tupaia_belangeri
ENSXETG00000010882	polr1c	76	76.136	ENSTTRG00000006344	POLR1C	76	76.136	Tursiops_truncatus
ENSXETG00000010882	polr1c	100	76.945	ENSUAMG00000025602	POLR1C	100	76.945	Ursus_americanus
ENSXETG00000010882	polr1c	100	76.945	ENSUMAG00000005938	POLR1C	100	76.945	Ursus_maritimus
ENSXETG00000010882	polr1c	100	74.640	ENSVVUG00000028922	POLR1C	100	74.640	Vulpes_vulpes
ENSXETG00000010882	polr1c	100	67.622	ENSXCOG00000014185	polr1c	100	67.622	Xiphophorus_couchianus
ENSXETG00000010882	polr1c	100	66.477	ENSXMAG00000015076	polr1c	100	67.705	Xiphophorus_maculatus