EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXETG00000010946 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Minus strand
Length
22050 bases
Position
chrGL173453.1:236205-258254
Accession
XB-GENE-485185
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000023927PABPPF00658.184.2e-3211
ENSXETP00000023927RRM_5PF13893.62.6e-0611
ENSXETP00000023927RRM_1PF00076.225e-8714
ENSXETP00000023927RRM_1PF00076.225e-8724
ENSXETP00000023927RRM_1PF00076.225e-8734
ENSXETP00000023927RRM_1PF00076.225e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000023927-1881-ENSXETP00000023927626 (aa)-K9J821
Gene Model
Click here to download ENSXETG00000010946's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010946's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXETG00000010946pabpc49975.510ENSXETG00000006635pabpc19975.276
ENSXETG00000010946pabpc45934.940ENSXETG00000016741elavl39334.940
ENSXETG00000010946pabpc46038.636ENSXETG00000014344celf55938.636
ENSXETG00000010946pabpc49865.764ENSXETG00000022831pabpc1l9965.764
ENSXETG00000010946pabpc48441.403ENSXETG00000015439-9841.686
ENSXETG00000010946pabpc45990.476ENSXETG00000027221-10090.476
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000010946pabpc410083.333ENSG00000090621PABPC410085.271Homo_sapiens
ENSXETG00000010946pabpc49982.803ENSAPOG00000001161pabpc49982.965Acanthochromis_polyacanthus
ENSXETG00000010946pabpc49849.515ENSAMEG00000015083-9849.349Ailuropoda_melanoleuca
ENSXETG00000010946pabpc410079.514ENSAMEG00000011535-9979.514Ailuropoda_melanoleuca
ENSXETG00000010946pabpc410082.492ENSACIG00000023343pabpc49983.123Amphilophus_citrinellus
ENSXETG00000010946pabpc49982.484ENSAOCG00000021529pabpc49982.650Amphiprion_ocellaris
ENSXETG00000010946pabpc49982.484ENSAPEG00000019196pabpc49982.650Amphiprion_percula
ENSXETG00000010946pabpc49982.512ENSATEG00000007402pabpc49982.520Anabas_testudineus
ENSXETG00000010946pabpc410086.508ENSAPLG00000009729-10086.508Anas_platyrhynchos
ENSXETG00000010946pabpc49986.047ENSACAG00000002544PABPC410086.047Anolis_carolinensis
ENSXETG00000010946pabpc410083.333ENSANAG00000025079PABPC49983.333Aotus_nancymaae
ENSXETG00000010946pabpc410082.362ENSACLG00000019558pabpc49982.992Astatotilapia_calliptera
ENSXETG00000010946pabpc49978.254ENSAMXG00000018779pabpc49978.889Astyanax_mexicanus
ENSXETG00000010946pabpc410080.124ENSBTAG00000017125PABPC49980.124Bos_taurus
ENSXETG00000010946pabpc45875.449ENSBTAG00000048536-9375.449Bos_taurus
ENSXETG00000010946pabpc46376.735ENSCJAG00000045953-9476.735Callithrix_jacchus
ENSXETG00000010946pabpc410083.175ENSCJAG00000002512-9983.175Callithrix_jacchus
ENSXETG00000010946pabpc410083.333ENSCAFG00000003081PABPC49983.333Canis_familiaris
ENSXETG00000010946pabpc49683.748ENSCAFG00020004161PABPC49979.666Canis_lupus_dingo
ENSXETG00000010946pabpc410064.678ENSCHIG00000023385-9964.521Capra_hircus
ENSXETG00000010946pabpc410079.666ENSCHIG00000019398-9979.666Capra_hircus
ENSXETG00000010946pabpc410083.333ENSTSYG00000006532PABPC49983.333Carlito_syrichta
ENSXETG00000010946pabpc49983.280ENSCAPG00000015984PABPC49983.280Cavia_aperea
ENSXETG00000010946pabpc410083.492ENSCPOG00000009552PABPC49983.492Cavia_porcellus
ENSXETG00000010946pabpc410083.175ENSCCAG00000037306PABPC49983.175Cebus_capucinus
ENSXETG00000010946pabpc410083.492ENSCATG00000042164PABPC49983.492Cercocebus_atys
ENSXETG00000010946pabpc410083.333ENSCLAG00000011899PABPC49983.333Chinchilla_lanigera
ENSXETG00000010946pabpc410079.818ENSCSAG00000001135PABPC49979.818Chlorocebus_sabaeus
ENSXETG00000010946pabpc48784.656ENSCHOG00000005327PABPC48184.656Choloepus_hoffmanni
ENSXETG00000010946pabpc410087.619ENSCPBG00000001038PABPC410087.619Chrysemys_picta_bellii
ENSXETG00000010946pabpc49983.736ENSCANG00000034177PABPC49983.736Colobus_angolensis_palliatus
ENSXETG00000010946pabpc49981.965ENSCGRG00001018166Pabpc49980.763Cricetulus_griseus_chok1gshd
ENSXETG00000010946pabpc49882.026ENSCGRG00000009777Pabpc49980.806Cricetulus_griseus_crigri
ENSXETG00000010946pabpc49981.703ENSCSEG00000000130pabpc49982.334Cynoglossus_semilaevis
ENSXETG00000010946pabpc49982.268ENSCVAG00000019246pabpc49982.907Cyprinodon_variegatus
ENSXETG00000010946pabpc49983.067ENSDARG00000059259pabpc49983.416Danio_rerio
ENSXETG00000010946pabpc49982.111ENSDNOG00000018444-9982.111Dasypus_novemcinctus
ENSXETG00000010946pabpc410080.560ENSDORG00000011581Pabpc49980.560Dipodomys_ordii
ENSXETG00000010946pabpc49555.289ENSETEG00000009172-9953.974Echinops_telfairi
ENSXETG00000010946pabpc410095.312ENSETEG00000018453-8495.312Echinops_telfairi
ENSXETG00000010946pabpc49973.502ENSEBUG00000000992pabpc410072.986Eptatretus_burgeri
ENSXETG00000010946pabpc49776.090ENSEBUG00000013782pabpc49975.633Eptatretus_burgeri
ENSXETG00000010946pabpc410079.514ENSEASG00005014119PABPC49979.514Equus_asinus_asinus
ENSXETG00000010946pabpc410079.514ENSECAG00000009396PABPC49979.514Equus_caballus
ENSXETG00000010946pabpc49879.289ENSEEUG00000002962PABPC49978.907Erinaceus_europaeus
ENSXETG00000010946pabpc49982.409ENSELUG00000003195pabpc49983.019Esox_lucius
ENSXETG00000010946pabpc410083.333ENSFCAG00000015254-9983.333Felis_catus
ENSXETG00000010946pabpc410087.281ENSFALG00000000543PABPC410087.281Ficedula_albicollis
ENSXETG00000010946pabpc48652.361ENSFDAG00000010581-9650.091Fukomys_damarensis
ENSXETG00000010946pabpc410079.059ENSFDAG00000020016-9979.363Fukomys_damarensis
ENSXETG00000010946pabpc410082.205ENSFHEG00000007548pabpc49982.835Fundulus_heteroclitus
ENSXETG00000010946pabpc410080.945ENSGMOG00000019025pabpc49981.575Gadus_morhua
ENSXETG00000010946pabpc410087.778ENSGALG00000003800PABPC410087.778Gallus_gallus
ENSXETG00000010946pabpc49984.009ENSGAFG00000018195pabpc49888.333Gambusia_affinis
ENSXETG00000010946pabpc49980.915ENSGACG00000007179pabpc49981.732Gasterosteus_aculeatus
ENSXETG00000010946pabpc410087.619ENSGAGG00000001888PABPC410087.619Gopherus_agassizii
ENSXETG00000010946pabpc410083.333ENSGGOG00000004002PABPC49983.333Gorilla_gorilla
ENSXETG00000010946pabpc410082.205ENSHBUG00000020206pabpc49982.835Haplochromis_burtoni
ENSXETG00000010946pabpc410083.175ENSHGLG00000011162PABPC49983.175Heterocephalus_glaber_female
ENSXETG00000010946pabpc410083.175ENSHGLG00100001580PABPC49983.175Heterocephalus_glaber_male
ENSXETG00000010946pabpc49982.780ENSHCOG00000012694pabpc49983.412Hippocampus_comes
ENSXETG00000010946pabpc49882.665ENSIPUG00000016620pabpc49982.677Ictalurus_punctatus
ENSXETG00000010946pabpc410082.035ENSSTOG00000010416PABPC49981.558Ictidomys_tridecemlineatus
ENSXETG00000010946pabpc410079.005ENSJJAG00000007781Pabpc49979.005Jaculus_jaculus
ENSXETG00000010946pabpc49981.270ENSKMAG00000013597pabpc49881.905Kryptolebias_marmoratus
ENSXETG00000010946pabpc410081.132ENSLBEG00000013654pabpc49980.564Labrus_bergylta
ENSXETG00000010946pabpc410087.382ENSLACG00000011907PABPC410087.382Latimeria_chalumnae
ENSXETG00000010946pabpc410084.434ENSLOCG00000001877pabpc49985.220Lepisosteus_oculatus
ENSXETG00000010946pabpc410082.194ENSLAFG00000000151PABPC49982.194Loxodonta_africana
ENSXETG00000010946pabpc410083.492ENSMFAG00000041481PABPC49983.492Macaca_fascicularis
ENSXETG00000010946pabpc410079.818ENSMMUG00000007497PABPC49979.818Macaca_mulatta
ENSXETG00000010946pabpc410083.492ENSMNEG00000043054PABPC49983.492Macaca_nemestrina
ENSXETG00000010946pabpc410083.492ENSMLEG00000040716PABPC49983.492Mandrillus_leucophaeus
ENSXETG00000010946pabpc49982.194ENSMAMG00000010025pabpc49982.362Mastacembelus_armatus
ENSXETG00000010946pabpc410082.205ENSMZEG00005006141pabpc49982.835Maylandia_zebra
ENSXETG00000010946pabpc49983.475ENSMGAG00000005408PABPC410083.475Meleagris_gallopavo
ENSXETG00000010946pabpc45779.327ENSMAUG00000001295-9779.327Mesocricetus_auratus
ENSXETG00000010946pabpc49974.233ENSMAUG00000019763-8387.500Mesocricetus_auratus
ENSXETG00000010946pabpc45871.856ENSMAUG00000004089-8971.856Mesocricetus_auratus
ENSXETG00000010946pabpc49976.548ENSMICG00000036729-9776.779Microcebus_murinus
ENSXETG00000010946pabpc48981.216ENSMICG00000016633-10081.038Microcebus_murinus
ENSXETG00000010946pabpc49983.654ENSMOCG00000006763Pabpc49983.016Microtus_ochrogaster
ENSXETG00000010946pabpc410079.430ENSMMOG00000002363pabpc49979.937Mola_mola
ENSXETG00000010946pabpc46067.467ENSMODG00000018051-9667.467Monodelphis_domestica
ENSXETG00000010946pabpc410082.927ENSMODG00000017657-10082.927Monodelphis_domestica
ENSXETG00000010946pabpc49981.616ENSMALG00000011017pabpc49981.476Monopterus_albus
ENSXETG00000010946pabpc49969.151MGP_CAROLIEiJ_G0024864-9970.650Mus_caroli
ENSXETG00000010946pabpc410078.300MGP_CAROLIEiJ_G0026435-10086.525Mus_caroli
ENSXETG00000010946pabpc410082.540ENSMUSG00000011257Pabpc410087.500Mus_musculus
ENSXETG00000010946pabpc49978.462MGP_PahariEiJ_G0028765Pabpc410087.234Mus_pahari
ENSXETG00000010946pabpc49967.008MGP_SPRETEiJ_G0027415Pabpc410087.234Mus_spretus
ENSXETG00000010946pabpc49545.258ENSMPUG00000006836-10044.959Mustela_putorius_furo
ENSXETG00000010946pabpc410079.666ENSMPUG00000014414-9979.666Mustela_putorius_furo
ENSXETG00000010946pabpc410081.876ENSMLUG00000012068PABPC49981.876Myotis_lucifugus
ENSXETG00000010946pabpc410082.194ENSNGAG00000018292Pabpc49982.194Nannospalax_galili
ENSXETG00000010946pabpc46088.942ENSNBRG00000009708pabpc49888.942Neolamprologus_brichardi
ENSXETG00000010946pabpc45289.881ENSNBRG00000010047-7289.881Neolamprologus_brichardi
ENSXETG00000010946pabpc410083.492ENSNLEG00000011928PABPC49983.492Nomascus_leucogenys
ENSXETG00000010946pabpc48690.476ENSOPRG00000011984PABPC48790.476Ochotona_princeps
ENSXETG00000010946pabpc45372.857ENSODEG00000013457-10072.857Octodon_degus
ENSXETG00000010946pabpc49975.264ENSODEG00000017434-9975.053Octodon_degus
ENSXETG00000010946pabpc410082.857ENSODEG00000006592-9982.857Octodon_degus
ENSXETG00000010946pabpc410082.205ENSONIG00000008176pabpc49982.835Oreochromis_niloticus
ENSXETG00000010946pabpc410087.619ENSOANG00000010001PABPC410087.619Ornithorhynchus_anatinus
ENSXETG00000010946pabpc49679.589ENSOCUG00000000562PABPC48879.589Oryctolagus_cuniculus
ENSXETG00000010946pabpc49987.037ENSORLG00000017479pabpc49986.769Oryzias_latipes
ENSXETG00000010946pabpc49987.037ENSORLG00020018644pabpc49986.769Oryzias_latipes_hni
ENSXETG00000010946pabpc49987.037ENSORLG00015015042pabpc49986.769Oryzias_latipes_hsok
ENSXETG00000010946pabpc49981.240ENSOMEG00000014410pabpc49981.604Oryzias_melastigma
ENSXETG00000010946pabpc410079.721ENSOGAG00000004067PABPC49979.721Otolemur_garnettii
ENSXETG00000010946pabpc410079.666ENSOARG00000020060PABPC49979.666Ovis_aries
ENSXETG00000010946pabpc410083.333ENSPPAG00000043625PABPC49983.333Pan_paniscus
ENSXETG00000010946pabpc410083.333ENSPPRG00000024727PABPC49983.333Panthera_pardus
ENSXETG00000010946pabpc410083.333ENSPTIG00000005829PABPC49983.333Panthera_tigris_altaica
ENSXETG00000010946pabpc410083.333ENSPTRG00000000573PABPC49983.333Pan_troglodytes
ENSXETG00000010946pabpc410083.492ENSPANG00000009484PABPC49983.492Papio_anubis
ENSXETG00000010946pabpc49982.650ENSPKIG00000025356pabpc49983.150Paramormyrops_kingsleyae
ENSXETG00000010946pabpc410087.778ENSPSIG00000016892PABPC410087.778Pelodiscus_sinensis
ENSXETG00000010946pabpc49980.351ENSPMGG00000009073pabpc49880.032Periophthalmus_magnuspinnatus
ENSXETG00000010946pabpc49978.956ENSPEMG00000024193-9978.956Peromyscus_maniculatus_bairdii
ENSXETG00000010946pabpc410082.540ENSPEMG00000023569-9982.540Peromyscus_maniculatus_bairdii
ENSXETG00000010946pabpc48972.097ENSPMAG00000002836pabpc410072.444Petromyzon_marinus
ENSXETG00000010946pabpc49770.902ENSPMAG00000007885pabpc49969.679Petromyzon_marinus
ENSXETG00000010946pabpc410086.349ENSPCIG00000020674PABPC410086.349Phascolarctos_cinereus
ENSXETG00000010946pabpc410081.260ENSPFOG00000002682pabpc49982.520Poecilia_formosa
ENSXETG00000010946pabpc410081.417ENSPLAG00000010112pabpc49982.677Poecilia_latipinna
ENSXETG00000010946pabpc49981.717ENSPMEG00000019739pabpc49982.520Poecilia_mexicana
ENSXETG00000010946pabpc410081.890ENSPREG00000001589pabpc49982.520Poecilia_reticulata
ENSXETG00000010946pabpc410079.666ENSPPYG00000001506PABPC49979.666Pongo_abelii
ENSXETG00000010946pabpc410074.659ENSPCAG00000003341PABPC49974.659Procavia_capensis
ENSXETG00000010946pabpc410082.726ENSPCOG00000023725-9982.726Propithecus_coquereli
ENSXETG00000010946pabpc49965.831ENSPCOG00000025882-9967.021Propithecus_coquereli
ENSXETG00000010946pabpc49977.740ENSPVAG00000002187PABPC49977.740Pteropus_vampyrus
ENSXETG00000010946pabpc410082.362ENSPNYG00000006134pabpc49982.992Pundamilia_nyererei
ENSXETG00000010946pabpc49982.567ENSPNAG00000024355pabpc49983.201Pygocentrus_nattereri
ENSXETG00000010946pabpc410078.227ENSRNOG00000028592AABR07035074.19978.227Rattus_norvegicus
ENSXETG00000010946pabpc410080.249ENSRNOG00000015642Pabpc49980.249Rattus_norvegicus
ENSXETG00000010946pabpc410083.492ENSRBIG00000039761PABPC49983.492Rhinopithecus_bieti
ENSXETG00000010946pabpc410083.492ENSRROG00000033355PABPC49983.492Rhinopithecus_roxellana
ENSXETG00000010946pabpc410083.175ENSSBOG00000026193PABPC49983.175Saimiri_boliviensis_boliviensis
ENSXETG00000010946pabpc410086.349ENSSHAG00000018139PABPC410086.349Sarcophilus_harrisii
ENSXETG00000010946pabpc49984.236ENSSFOG00015023514pabpc49984.236Scleropages_formosus
ENSXETG00000010946pabpc49981.847ENSSMAG00000009007pabpc49882.484Scophthalmus_maximus
ENSXETG00000010946pabpc49982.035ENSSDUG00000012683pabpc49981.890Seriola_dumerili
ENSXETG00000010946pabpc49982.035ENSSLDG00000013025pabpc49981.890Seriola_lalandi_dorsalis
ENSXETG00000010946pabpc410072.838ENSSARG00000000310PABPC49972.838Sorex_araneus
ENSXETG00000010946pabpc410086.804ENSSPUG00000003204PABPC410086.804Sphenodon_punctatus
ENSXETG00000010946pabpc49982.035ENSSPAG00000009252pabpc49982.205Stegastes_partitus
ENSXETG00000010946pabpc49542.602ENSSSCG00000036170-9642.681Sus_scrofa
ENSXETG00000010946pabpc410083.016ENSSSCG00000003660-9983.016Sus_scrofa
ENSXETG00000010946pabpc410083.182ENSTGUG00000001266PABPC410083.182Taeniopygia_guttata
ENSXETG00000010946pabpc410081.562ENSTRUG00000005907pabpc410082.188Takifugu_rubripes
ENSXETG00000010946pabpc410078.425ENSTNIG00000016902pabpc410078.425Tetraodon_nigroviridis
ENSXETG00000010946pabpc49269.140ENSTBEG00000009035PABPC49969.140Tupaia_belangeri
ENSXETG00000010946pabpc48960.963ENSTTRG00000014340PABPC49966.948Tursiops_truncatus
ENSXETG00000010946pabpc410083.333ENSUAMG00000000303PABPC49983.333Ursus_americanus
ENSXETG00000010946pabpc410082.796ENSUMAG00000019585PABPC49982.796Ursus_maritimus
ENSXETG00000010946pabpc47270.796ENSVPAG00000010041PABPC47370.796Vicugna_pacos
ENSXETG00000010946pabpc410083.333ENSVVUG00000005215PABPC49983.333Vulpes_vulpes
ENSXETG00000010946pabpc49981.975ENSXCOG00000013190pabpc49690.566Xiphophorus_couchianus
ENSXETG00000010946pabpc410081.732ENSXMAG00000019007pabpc49982.362Xiphophorus_maculatus

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