EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000010952 (Gene tree)
Gene ID: -
Gene Symbol: trit1
Alias: -
Full Name: Xenopus tropicalis tRNA isopentenyltransferase 1 (trit1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 16181 bases
Position: chrGL173453.1:339288-355468
Accession: NM_001011306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059895	IPPT	PF01715.17	7.5e-65	1	1
ENSXETP00000023941	IPPT	PF01715.17	2.3e-59	1	1
ENSXETP00000023941	zf-C2H2_jaz	PF12171.8	0.00011	1	1
ENSXETP00000059895	zf-C2H2_jaz	PF12171.8	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000023941	-	1645	-	ENSXETP00000023941	451 (aa)	-	F7EAA9
ENSXETT00000064963	-	1663	-	ENSXETP00000059895	457 (aa)	-	F7EJ49

Gene Model

Click here to download ENSXETG00000010952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000010952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000010952	trit1	92	66.194	ENSG00000043514	TRIT1	86	80.992	Homo_sapiens
ENSXETG00000010952	trit1	94	61.312	ENSAPOG00000020918	trit1	94	61.312	Acanthochromis_polyacanthus
ENSXETG00000010952	trit1	92	66.194	ENSAMEG00000004342	TRIT1	89	66.194	Ailuropoda_melanoleuca
ENSXETG00000010952	trit1	87	62.312	ENSACIG00000017409	trit1	87	61.667	Amphilophus_citrinellus
ENSXETG00000010952	trit1	94	61.644	ENSAOCG00000009850	trit1	90	61.644	Amphiprion_ocellaris
ENSXETG00000010952	trit1	94	61.872	ENSAPEG00000001481	trit1	90	61.872	Amphiprion_percula
ENSXETG00000010952	trit1	91	60.952	ENSATEG00000005426	trit1	87	60.952	Anabas_testudineus
ENSXETG00000010952	trit1	73	58.457	ENSAPLG00000011421	TRIT1	95	58.457	Anas_platyrhynchos
ENSXETG00000010952	trit1	100	60.131	ENSACAG00000002280	TRIT1	84	62.824	Anolis_carolinensis
ENSXETG00000010952	trit1	92	65.558	ENSANAG00000030732	TRIT1	88	65.558	Aotus_nancymaae
ENSXETG00000010952	trit1	94	60.277	ENSACLG00000004920	trit1	90	60.277	Astatotilapia_calliptera
ENSXETG00000010952	trit1	91	61.058	ENSAMXG00000010959	trit1	90	61.058	Astyanax_mexicanus
ENSXETG00000010952	trit1	98	63.920	ENSBTAG00000013832	TRIT1	89	66.430	Bos_taurus
ENSXETG00000010952	trit1	88	35.610	WBGene00001740	gro-1	96	35.915	Caenorhabditis_elegans
ENSXETG00000010952	trit1	92	65.321	ENSCJAG00000002620	TRIT1	92	64.881	Callithrix_jacchus
ENSXETG00000010952	trit1	92	65.802	ENSCAFG00000003048	TRIT1	89	65.802	Canis_familiaris
ENSXETG00000010952	trit1	92	64.073	ENSCAFG00020003875	TRIT1	92	64.244	Canis_lupus_dingo
ENSXETG00000010952	trit1	92	65.105	ENSCHIG00000013259	TRIT1	89	65.105	Capra_hircus
ENSXETG00000010952	trit1	92	65.952	ENSTSYG00000004363	TRIT1	88	65.952	Carlito_syrichta
ENSXETG00000010952	trit1	73	61.585	ENSCAPG00000017001	TRIT1	82	61.585	Cavia_aperea
ENSXETG00000010952	trit1	91	66.110	ENSCPOG00000012820	TRIT1	88	66.110	Cavia_porcellus
ENSXETG00000010952	trit1	97	63.371	ENSCCAG00000031271	TRIT1	94	67.598	Cebus_capucinus
ENSXETG00000010952	trit1	94	60.829	ENSCATG00000034344	TRIT1	92	65.465	Cercocebus_atys
ENSXETG00000010952	trit1	92	67.857	ENSCLAG00000009828	TRIT1	88	67.857	Chinchilla_lanigera
ENSXETG00000010952	trit1	85	63.939	ENSCSAG00000001137	TRIT1	92	63.939	Chlorocebus_sabaeus
ENSXETG00000010952	trit1	99	62.031	ENSCHOG00000000435	TRIT1	89	65.248	Choloepus_hoffmanni
ENSXETG00000010952	trit1	90	43.602	ENSCSAVG00000002050	-	91	43.602	Ciona_savignyi
ENSXETG00000010952	trit1	98	63.393	ENSCANG00000043008	TRIT1	92	65.165	Colobus_angolensis_palliatus
ENSXETG00000010952	trit1	92	66.194	ENSCGRG00001001894	Trit1	89	66.194	Cricetulus_griseus_chok1gshd
ENSXETG00000010952	trit1	88	62.594	ENSCGRG00000007059	Trit1	87	62.750	Cricetulus_griseus_crigri
ENSXETG00000010952	trit1	87	59.900	ENSCSEG00000009574	trit1	88	59.759	Cynoglossus_semilaevis
ENSXETG00000010952	trit1	93	59.302	ENSDARG00000032876	trit1	95	61.728	Danio_rerio
ENSXETG00000010952	trit1	92	56.405	ENSDNOG00000001994	TRIT1	90	56.405	Dasypus_novemcinctus
ENSXETG00000010952	trit1	95	59.497	ENSDORG00000012449	Trit1	94	59.589	Dipodomys_ordii
ENSXETG00000010952	trit1	92	39.735	FBgn0043799	CG31381	90	39.735	Drosophila_melanogaster
ENSXETG00000010952	trit1	89	64.269	ENSETEG00000008733	TRIT1	96	64.269	Echinops_telfairi
ENSXETG00000010952	trit1	93	55.529	ENSEBUG00000012845	trit1	93	55.529	Eptatretus_burgeri
ENSXETG00000010952	trit1	92	64.269	ENSECAG00000010597	TRIT1	82	64.269	Equus_caballus
ENSXETG00000010952	trit1	75	60.997	ENSEEUG00000009269	TRIT1	72	60.997	Erinaceus_europaeus
ENSXETG00000010952	trit1	90	54.348	ENSELUG00000017278	trit1	85	54.676	Esox_lucius
ENSXETG00000010952	trit1	92	65.721	ENSFCAG00000006029	TRIT1	89	65.721	Felis_catus
ENSXETG00000010952	trit1	83	66.230	ENSFALG00000000532	TRIT1	94	66.230	Ficedula_albicollis
ENSXETG00000010952	trit1	92	63.426	ENSFDAG00000003098	TRIT1	94	63.426	Fukomys_damarensis
ENSXETG00000010952	trit1	70	53.870	ENSFHEG00000022274	trit1	94	53.651	Fundulus_heteroclitus
ENSXETG00000010952	trit1	90	60.337	ENSGMOG00000006522	trit1	96	60.337	Gadus_morhua
ENSXETG00000010952	trit1	92	67.062	ENSGALG00000003851	TRIT1	90	67.062	Gallus_gallus
ENSXETG00000010952	trit1	70	64.444	ENSGAFG00000018636	trit1	96	61.798	Gambusia_affinis
ENSXETG00000010952	trit1	90	59.569	ENSGACG00000008493	trit1	95	59.569	Gasterosteus_aculeatus
ENSXETG00000010952	trit1	86	62.087	ENSGAGG00000000522	TRIT1	95	62.087	Gopherus_agassizii
ENSXETG00000010952	trit1	92	66.194	ENSGGOG00000010070	TRIT1	92	65.361	Gorilla_gorilla
ENSXETG00000010952	trit1	94	60.508	ENSHBUG00000018999	trit1	90	60.508	Haplochromis_burtoni
ENSXETG00000010952	trit1	92	60.533	ENSHGLG00000009564	-	89	60.533	Heterocephalus_glaber_female
ENSXETG00000010952	trit1	92	66.033	ENSHGLG00000010308	-	89	66.033	Heterocephalus_glaber_female
ENSXETG00000010952	trit1	81	50.000	ENSHGLG00100018159	-	87	75.000	Heterocephalus_glaber_male
ENSXETG00000010952	trit1	92	66.033	ENSHGLG00100015382	-	90	66.033	Heterocephalus_glaber_male
ENSXETG00000010952	trit1	89	60.143	ENSHCOG00000006755	trit1	88	55.385	Hippocampus_comes
ENSXETG00000010952	trit1	93	60.920	ENSIPUG00000021822	trit1	89	60.920	Ictalurus_punctatus
ENSXETG00000010952	trit1	98	63.982	ENSSTOG00000006446	TRIT1	91	63.901	Ictidomys_tridecemlineatus
ENSXETG00000010952	trit1	93	59.346	ENSJJAG00000000300	-	89	59.346	Jaculus_jaculus
ENSXETG00000010952	trit1	93	62.972	ENSJJAG00000000316	-	92	62.972	Jaculus_jaculus
ENSXETG00000010952	trit1	91	62.768	ENSKMAG00000021788	trit1	87	62.768	Kryptolebias_marmoratus
ENSXETG00000010952	trit1	95	59.226	ENSLBEG00000024262	trit1	90	59.226	Labrus_bergylta
ENSXETG00000010952	trit1	93	62.763	ENSLACG00000013861	TRIT1	88	62.763	Latimeria_chalumnae
ENSXETG00000010952	trit1	90	61.098	ENSLOCG00000002057	trit1	87	61.098	Lepisosteus_oculatus
ENSXETG00000010952	trit1	92	65.248	ENSLAFG00000016876	TRIT1	89	65.248	Loxodonta_africana
ENSXETG00000010952	trit1	94	65.197	ENSMFAG00000001316	TRIT1	92	65.465	Macaca_fascicularis
ENSXETG00000010952	trit1	94	65.197	ENSMMUG00000016220	TRIT1	92	65.465	Macaca_mulatta
ENSXETG00000010952	trit1	94	65.197	ENSMNEG00000023137	TRIT1	92	65.465	Macaca_nemestrina
ENSXETG00000010952	trit1	94	65.197	ENSMLEG00000035296	TRIT1	92	65.465	Mandrillus_leucophaeus
ENSXETG00000010952	trit1	91	60.859	ENSMAMG00000005868	trit1	86	60.859	Mastacembelus_armatus
ENSXETG00000010952	trit1	94	60.046	ENSMZEG00005011506	trit1	90	60.046	Maylandia_zebra
ENSXETG00000010952	trit1	83	66.053	ENSMGAG00000005516	TRIT1	99	66.053	Meleagris_gallopavo
ENSXETG00000010952	trit1	92	66.194	ENSMAUG00000000399	Trit1	89	66.194	Mesocricetus_auratus
ENSXETG00000010952	trit1	98	63.982	ENSMICG00000016294	TRIT1	93	63.901	Microcebus_murinus
ENSXETG00000010952	trit1	92	68.246	ENSMOCG00000008173	Trit1	88	68.246	Microtus_ochrogaster
ENSXETG00000010952	trit1	87	58.250	ENSMMOG00000021140	trit1	91	58.250	Mola_mola
ENSXETG00000010952	trit1	93	62.759	ENSMODG00000017650	TRIT1	92	63.403	Monodelphis_domestica
ENSXETG00000010952	trit1	91	59.811	ENSMALG00000017843	trit1	87	59.811	Monopterus_albus
ENSXETG00000010952	trit1	92	66.430	MGP_CAROLIEiJ_G0026428	Trit1	89	66.430	Mus_caroli
ENSXETG00000010952	trit1	92	66.667	ENSMUSG00000028653	Trit1	89	66.667	Mus_musculus
ENSXETG00000010952	trit1	92	66.509	MGP_PahariEiJ_G0028758	Trit1	89	66.509	Mus_pahari
ENSXETG00000010952	trit1	92	66.430	MGP_SPRETEiJ_G0027408	Trit1	89	66.430	Mus_spretus
ENSXETG00000010952	trit1	92	65.566	ENSMPUG00000014291	TRIT1	89	65.566	Mustela_putorius_furo
ENSXETG00000010952	trit1	92	65.485	ENSMLUG00000000334	TRIT1	88	65.485	Myotis_lucifugus
ENSXETG00000010952	trit1	92	66.430	ENSNLEG00000012038	TRIT1	92	65.766	Nomascus_leucogenys
ENSXETG00000010952	trit1	79	81.667	ENSMEUG00000005217	TRIT1	78	81.667	Notamacropus_eugenii
ENSXETG00000010952	trit1	71	58.960	ENSOPRG00000003205	-	62	58.960	Ochotona_princeps
ENSXETG00000010952	trit1	96	61.765	ENSODEG00000006117	TRIT1	92	61.765	Octodon_degus
ENSXETG00000010952	trit1	94	59.589	ENSONIG00000015407	trit1	91	59.589	Oreochromis_niloticus
ENSXETG00000010952	trit1	83	64.304	ENSOANG00000002779	TRIT1	95	64.304	Ornithorhynchus_anatinus
ENSXETG00000010952	trit1	92	67.849	ENSOCUG00000002054	TRIT1	89	67.849	Oryctolagus_cuniculus
ENSXETG00000010952	trit1	91	62.651	ENSORLG00000005802	trit1	89	62.410	Oryzias_latipes
ENSXETG00000010952	trit1	91	61.928	ENSORLG00020005519	trit1	89	61.928	Oryzias_latipes_hni
ENSXETG00000010952	trit1	91	61.928	ENSORLG00015018715	trit1	89	61.928	Oryzias_latipes_hsok
ENSXETG00000010952	trit1	97	57.684	ENSOMEG00000006569	trit1	95	57.684	Oryzias_melastigma
ENSXETG00000010952	trit1	93	66.353	ENSOGAG00000009571	TRIT1	89	66.353	Otolemur_garnettii
ENSXETG00000010952	trit1	92	66.038	ENSOARG00000020140	TRIT1	88	66.038	Ovis_aries
ENSXETG00000010952	trit1	92	66.194	ENSPPAG00000023930	TRIT1	92	65.465	Pan_paniscus
ENSXETG00000010952	trit1	92	65.957	ENSPPRG00000009680	TRIT1	89	65.957	Panthera_pardus
ENSXETG00000010952	trit1	92	65.957	ENSPTIG00000021134	TRIT1	89	65.957	Panthera_tigris_altaica
ENSXETG00000010952	trit1	92	66.194	ENSPTRG00000000579	TRIT1	92	65.465	Pan_troglodytes
ENSXETG00000010952	trit1	94	65.197	ENSPANG00000018125	TRIT1	92	65.465	Papio_anubis
ENSXETG00000010952	trit1	85	54.145	ENSPKIG00000024527	trit1	98	54.145	Paramormyrops_kingsleyae
ENSXETG00000010952	trit1	80	49.457	ENSPSIG00000017073	TRIT1	99	48.895	Pelodiscus_sinensis
ENSXETG00000010952	trit1	81	61.081	ENSPMGG00000018445	trit1	91	60.471	Periophthalmus_magnuspinnatus
ENSXETG00000010952	trit1	92	67.217	ENSPEMG00000022418	Trit1	89	67.217	Peromyscus_maniculatus_bairdii
ENSXETG00000010952	trit1	84	54.082	ENSPMAG00000008892	trit1	97	54.082	Petromyzon_marinus
ENSXETG00000010952	trit1	92	66.038	ENSPCIG00000020666	TRIT1	93	66.566	Phascolarctos_cinereus
ENSXETG00000010952	trit1	91	60.333	ENSPFOG00000014626	trit1	88	60.333	Poecilia_formosa
ENSXETG00000010952	trit1	70	62.540	ENSPLAG00000011669	trit1	91	62.540	Poecilia_latipinna
ENSXETG00000010952	trit1	56	62.550	ENSPMEG00000023788	trit1	90	62.550	Poecilia_mexicana
ENSXETG00000010952	trit1	70	62.857	ENSPREG00000018182	trit1	88	62.857	Poecilia_reticulata
ENSXETG00000010952	trit1	92	66.194	ENSPPYG00000001499	TRIT1	89	66.194	Pongo_abelii
ENSXETG00000010952	trit1	60	87.500	ENSPCAG00000014680	TRIT1	76	87.500	Procavia_capensis
ENSXETG00000010952	trit1	92	66.033	ENSPCOG00000014150	TRIT1	88	66.033	Propithecus_coquereli
ENSXETG00000010952	trit1	79	77.686	ENSPVAG00000003344	TRIT1	78	77.686	Pteropus_vampyrus
ENSXETG00000010952	trit1	67	61.165	ENSPNYG00000001003	trit1	98	61.489	Pundamilia_nyererei
ENSXETG00000010952	trit1	91	58.413	ENSPNAG00000009466	trit1	88	60.674	Pygocentrus_nattereri
ENSXETG00000010952	trit1	92	63.844	ENSRNOG00000014274	Trit1	89	63.844	Rattus_norvegicus
ENSXETG00000010952	trit1	94	64.965	ENSRBIG00000043179	TRIT1	92	65.165	Rhinopithecus_bieti
ENSXETG00000010952	trit1	94	64.965	ENSRROG00000042670	TRIT1	92	65.165	Rhinopithecus_roxellana
ENSXETG00000010952	trit1	95	32.889	YOR274W	-	97	32.889	Saccharomyces_cerevisiae
ENSXETG00000010952	trit1	98	62.749	ENSSBOG00000024417	TRIT1	91	66.261	Saimiri_boliviensis_boliviensis
ENSXETG00000010952	trit1	85	62.437	ENSSHAG00000018363	TRIT1	91	62.437	Sarcophilus_harrisii
ENSXETG00000010952	trit1	92	56.398	ENSSFOG00015007284	trit1	82	56.398	Scleropages_formosus
ENSXETG00000010952	trit1	91	60.382	ENSSMAG00000020730	trit1	87	60.382	Scophthalmus_maximus
ENSXETG00000010952	trit1	97	58.772	ENSSDUG00000001683	trit1	91	59.732	Seriola_dumerili
ENSXETG00000010952	trit1	97	58.333	ENSSLDG00000008379	trit1	91	59.284	Seriola_lalandi_dorsalis
ENSXETG00000010952	trit1	95	63.556	ENSSARG00000004540	TRIT1	94	63.556	Sorex_araneus
ENSXETG00000010952	trit1	84	63.969	ENSSPUG00000003472	TRIT1	77	63.969	Sphenodon_punctatus
ENSXETG00000010952	trit1	91	61.283	ENSSPAG00000020745	trit1	92	61.283	Stegastes_partitus
ENSXETG00000010952	trit1	83	62.078	ENSTGUG00000001242	TRIT1	100	62.078	Taeniopygia_guttata
ENSXETG00000010952	trit1	95	56.782	ENSTRUG00000013936	trit1	90	59.277	Takifugu_rubripes
ENSXETG00000010952	trit1	93	59.624	ENSTNIG00000009240	trit1	92	59.485	Tetraodon_nigroviridis
ENSXETG00000010952	trit1	72	82.558	ENSTBEG00000001317	TRIT1	69	82.558	Tupaia_belangeri
ENSXETG00000010952	trit1	92	66.194	ENSTTRG00000005064	TRIT1	89	66.194	Tursiops_truncatus
ENSXETG00000010952	trit1	57	66.023	ENSUAMG00000000522	-	89	80.822	Ursus_americanus
ENSXETG00000010952	trit1	92	66.430	ENSUMAG00000017299	TRIT1	80	66.430	Ursus_maritimus
ENSXETG00000010952	trit1	99	58.850	ENSVPAG00000003008	TRIT1	88	61.702	Vicugna_pacos
ENSXETG00000010952	trit1	70	63.492	ENSXMAG00000016302	trit1	86	63.492	Xiphophorus_maculatus