EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000011086 (Gene tree)
Gene ID: -
Gene Symbol: alkbh1
Alias: -
Full Name: alkB homolog 1%2C histone H2A dioxygenase
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4111 bases
Position: chrGL173052.1:451407-455517
Accession: XB-GENE-6453434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000024214	2OG-FeII_Oxy_2	PF13532.6	1.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000024214	-	1308	-	ENSXETP00000024214	398 (aa)	XP_012824070	F6WM70

Gene Model

Click here to download ENSXETG00000011086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011086	alkbh1	91	57.447	ENSG00000100601	ALKBH1	96	57.447	Homo_sapiens
ENSXETG00000011086	alkbh1	91	56.749	ENSAPOG00000001293	alkbh1	95	56.749	Acanthochromis_polyacanthus
ENSXETG00000011086	alkbh1	87	60.056	ENSAMEG00000003966	ALKBH1	92	60.056	Ailuropoda_melanoleuca
ENSXETG00000011086	alkbh1	90	56.787	ENSACIG00000000165	alkbh1	96	56.787	Amphilophus_citrinellus
ENSXETG00000011086	alkbh1	77	53.443	ENSAOCG00000009356	-	86	53.443	Amphiprion_ocellaris
ENSXETG00000011086	alkbh1	67	57.303	ENSAOCG00000004578	-	87	57.303	Amphiprion_ocellaris
ENSXETG00000011086	alkbh1	90	56.630	ENSAOCG00000006323	alkbh1	97	56.630	Amphiprion_ocellaris
ENSXETG00000011086	alkbh1	87	57.925	ENSAPEG00000015899	alkbh1	91	57.925	Amphiprion_percula
ENSXETG00000011086	alkbh1	80	51.084	ENSAPEG00000006841	-	83	51.084	Amphiprion_percula
ENSXETG00000011086	alkbh1	67	56.929	ENSAPEG00000008720	-	89	56.929	Amphiprion_percula
ENSXETG00000011086	alkbh1	95	54.688	ENSATEG00000013518	alkbh1	98	54.688	Anabas_testudineus
ENSXETG00000011086	alkbh1	79	63.924	ENSAPLG00000015685	ALKBH1	97	63.924	Anas_platyrhynchos
ENSXETG00000011086	alkbh1	77	63.636	ENSACAG00000017276	ALKBH1	93	60.286	Anolis_carolinensis
ENSXETG00000011086	alkbh1	91	58.777	ENSANAG00000023679	ALKBH1	96	58.777	Aotus_nancymaae
ENSXETG00000011086	alkbh1	92	46.113	ENSACLG00000017932	alkbh1	97	46.113	Astatotilapia_calliptera
ENSXETG00000011086	alkbh1	92	56.334	ENSAMXG00000034307	alkbh1	97	56.183	Astyanax_mexicanus
ENSXETG00000011086	alkbh1	97	56.391	ENSBTAG00000008133	ALKBH1	99	56.391	Bos_taurus
ENSXETG00000011086	alkbh1	83	30.347	WBGene00021783	Y51H7C.5	86	30.347	Caenorhabditis_elegans
ENSXETG00000011086	alkbh1	91	57.979	ENSCJAG00000016936	ALKBH1	96	57.979	Callithrix_jacchus
ENSXETG00000011086	alkbh1	97	56.030	ENSCAFG00000017229	ALKBH1	99	56.030	Canis_familiaris
ENSXETG00000011086	alkbh1	91	57.979	ENSCAFG00020000856	ALKBH1	96	57.979	Canis_lupus_dingo
ENSXETG00000011086	alkbh1	97	57.644	ENSCHIG00000017896	ALKBH1	99	57.644	Capra_hircus
ENSXETG00000011086	alkbh1	91	52.660	ENSTSYG00000010944	ALKBH1	96	52.660	Carlito_syrichta
ENSXETG00000011086	alkbh1	77	47.319	ENSCAPG00000016188	ALKBH1	94	46.835	Cavia_aperea
ENSXETG00000011086	alkbh1	88	59.452	ENSCPOG00000001498	ALKBH1	94	59.452	Cavia_porcellus
ENSXETG00000011086	alkbh1	87	60.665	ENSCCAG00000037198	ALKBH1	93	60.665	Cebus_capucinus
ENSXETG00000011086	alkbh1	91	57.979	ENSCATG00000003846	ALKBH1	96	57.979	Cercocebus_atys
ENSXETG00000011086	alkbh1	90	58.871	ENSCLAG00000014129	ALKBH1	95	58.871	Chinchilla_lanigera
ENSXETG00000011086	alkbh1	62	62.037	ENSCHOG00000001531	ALKBH1	65	62.037	Choloepus_hoffmanni
ENSXETG00000011086	alkbh1	87	64.306	ENSCPBG00000026326	ALKBH1	97	62.842	Chrysemys_picta_bellii
ENSXETG00000011086	alkbh1	79	33.016	ENSCING00000022762	-	99	33.016	Ciona_intestinalis
ENSXETG00000011086	alkbh1	67	39.781	ENSCSAVG00000011640	-	98	36.923	Ciona_savignyi
ENSXETG00000011086	alkbh1	89	59.128	ENSCANG00000028132	ALKBH1	94	59.128	Colobus_angolensis_palliatus
ENSXETG00000011086	alkbh1	91	58.133	ENSCGRG00001009815	Alkbh1	96	58.133	Cricetulus_griseus_chok1gshd
ENSXETG00000011086	alkbh1	91	59.016	ENSCGRG00000009963	Alkbh1	96	59.016	Cricetulus_griseus_crigri
ENSXETG00000011086	alkbh1	90	56.403	ENSCSEG00000015769	alkbh1	96	56.403	Cynoglossus_semilaevis
ENSXETG00000011086	alkbh1	85	57.391	ENSCVAG00000012507	alkbh1	87	57.391	Cyprinodon_variegatus
ENSXETG00000011086	alkbh1	83	58.308	ENSDARG00000071164	alkbh1	100	58.308	Danio_rerio
ENSXETG00000011086	alkbh1	82	62.242	ENSDNOG00000007719	ALKBH1	87	62.242	Dasypus_novemcinctus
ENSXETG00000011086	alkbh1	84	60.997	ENSDORG00000012377	Alkbh1	89	60.997	Dipodomys_ordii
ENSXETG00000011086	alkbh1	80	37.651	FBgn0065035	AlkB	98	37.651	Drosophila_melanogaster
ENSXETG00000011086	alkbh1	86	58.357	ENSETEG00000010342	ALKBH1	91	58.357	Echinops_telfairi
ENSXETG00000011086	alkbh1	82	48.368	ENSEBUG00000006261	alkbh1	92	48.368	Eptatretus_burgeri
ENSXETG00000011086	alkbh1	84	62.029	ENSEASG00005020190	ALKBH1	89	62.029	Equus_asinus_asinus
ENSXETG00000011086	alkbh1	84	62.029	ENSECAG00000022027	ALKBH1	89	62.029	Equus_caballus
ENSXETG00000011086	alkbh1	57	48.101	ENSEEUG00000007227	-	96	48.101	Erinaceus_europaeus
ENSXETG00000011086	alkbh1	90	57.560	ENSELUG00000016747	alkbh1	93	57.560	Esox_lucius
ENSXETG00000011086	alkbh1	91	50.263	ENSFCAG00000037897	ALKBH1	95	50.263	Felis_catus
ENSXETG00000011086	alkbh1	87	64.162	ENSFALG00000012588	ALKBH1	93	64.162	Ficedula_albicollis
ENSXETG00000011086	alkbh1	86	60.907	ENSFDAG00000019064	ALKBH1	91	60.907	Fukomys_damarensis
ENSXETG00000011086	alkbh1	91	54.787	ENSFHEG00000015690	alkbh1	96	56.881	Fundulus_heteroclitus
ENSXETG00000011086	alkbh1	73	56.164	ENSGMOG00000016932	alkbh1	100	56.164	Gadus_morhua
ENSXETG00000011086	alkbh1	88	61.823	ENSGALG00000010485	ALKBH1	92	60.158	Gallus_gallus
ENSXETG00000011086	alkbh1	91	55.285	ENSGAFG00000010990	alkbh1	95	55.285	Gambusia_affinis
ENSXETG00000011086	alkbh1	74	53.584	ENSGACG00000013378	alkbh1	99	53.584	Gasterosteus_aculeatus
ENSXETG00000011086	alkbh1	87	64.589	ENSGAGG00000009957	ALKBH1	95	64.246	Gopherus_agassizii
ENSXETG00000011086	alkbh1	91	57.181	ENSGGOG00000011055	ALKBH1	96	57.181	Gorilla_gorilla
ENSXETG00000011086	alkbh1	86	60.169	ENSHGLG00000015533	ALKBH1	91	60.169	Heterocephalus_glaber_female
ENSXETG00000011086	alkbh1	86	60.169	ENSHGLG00100013968	ALKBH1	91	60.169	Heterocephalus_glaber_male
ENSXETG00000011086	alkbh1	90	51.892	ENSHCOG00000006780	alkbh1	96	51.892	Hippocampus_comes
ENSXETG00000011086	alkbh1	92	55.764	ENSIPUG00000010201	alkbh1	99	55.764	Ictalurus_punctatus
ENSXETG00000011086	alkbh1	76	58.199	ENSSTOG00000024819	-	83	58.199	Ictidomys_tridecemlineatus
ENSXETG00000011086	alkbh1	86	59.375	ENSSTOG00000003254	-	90	59.375	Ictidomys_tridecemlineatus
ENSXETG00000011086	alkbh1	91	59.786	ENSJJAG00000019755	Alkbh1	96	59.786	Jaculus_jaculus
ENSXETG00000011086	alkbh1	91	55.435	ENSKMAG00000002019	alkbh1	95	55.435	Kryptolebias_marmoratus
ENSXETG00000011086	alkbh1	87	57.471	ENSLBEG00000007472	alkbh1	91	57.471	Labrus_bergylta
ENSXETG00000011086	alkbh1	88	63.099	ENSLACG00000013496	ALKBH1	95	63.099	Latimeria_chalumnae
ENSXETG00000011086	alkbh1	84	61.243	ENSLOCG00000008800	alkbh1	90	61.243	Lepisosteus_oculatus
ENSXETG00000011086	alkbh1	83	62.353	ENSLAFG00000003475	ALKBH1	87	62.353	Loxodonta_africana
ENSXETG00000011086	alkbh1	91	58.400	ENSMFAG00000001551	ALKBH1	96	58.400	Macaca_fascicularis
ENSXETG00000011086	alkbh1	91	57.979	ENSMMUG00000023626	ALKBH1	96	57.979	Macaca_mulatta
ENSXETG00000011086	alkbh1	91	54.133	ENSMNEG00000033314	ALKBH1	95	54.133	Macaca_nemestrina
ENSXETG00000011086	alkbh1	91	58.667	ENSMLEG00000033965	ALKBH1	96	58.667	Mandrillus_leucophaeus
ENSXETG00000011086	alkbh1	88	57.865	ENSMAMG00000016048	alkbh1	100	57.865	Mastacembelus_armatus
ENSXETG00000011086	alkbh1	87	57.550	ENSMZEG00005004627	alkbh1	92	57.550	Maylandia_zebra
ENSXETG00000011086	alkbh1	80	62.500	ENSMGAG00000012910	ALKBH1	98	62.500	Meleagris_gallopavo
ENSXETG00000011086	alkbh1	91	47.340	ENSMAUG00000012502	Alkbh1	95	47.340	Mesocricetus_auratus
ENSXETG00000011086	alkbh1	86	61.299	ENSMICG00000030789	ALKBH1	91	61.299	Microcebus_murinus
ENSXETG00000011086	alkbh1	90	58.649	ENSMOCG00000005374	Alkbh1	95	58.649	Microtus_ochrogaster
ENSXETG00000011086	alkbh1	91	55.769	ENSMMOG00000018265	alkbh1	98	54.420	Mola_mola
ENSXETG00000011086	alkbh1	83	62.941	ENSMODG00000005263	ALKBH1	96	59.239	Monodelphis_domestica
ENSXETG00000011086	alkbh1	91	56.557	ENSMALG00000012608	alkbh1	97	56.557	Monopterus_albus
ENSXETG00000011086	alkbh1	90	58.602	ENSMUSG00000079036	Alkbh1	99	65.657	Mus_musculus
ENSXETG00000011086	alkbh1	90	59.140	MGP_PahariEiJ_G0029753	Alkbh1	100	65.657	Mus_pahari
ENSXETG00000011086	alkbh1	90	58.333	MGP_SPRETEiJ_G0018839	Alkbh1	100	65.152	Mus_spretus
ENSXETG00000011086	alkbh1	97	55.838	ENSMPUG00000008742	ALKBH1	99	55.838	Mustela_putorius_furo
ENSXETG00000011086	alkbh1	91	58.133	ENSMLUG00000005220	ALKBH1	96	58.133	Myotis_lucifugus
ENSXETG00000011086	alkbh1	91	58.021	ENSNGAG00000006997	Alkbh1	96	58.556	Nannospalax_galili
ENSXETG00000011086	alkbh1	92	48.108	ENSNBRG00000012113	alkbh1	97	48.108	Neolamprologus_brichardi
ENSXETG00000011086	alkbh1	89	47.826	ENSNLEG00000016766	ALKBH1	93	47.826	Nomascus_leucogenys
ENSXETG00000011086	alkbh1	90	55.858	ENSMEUG00000015005	ALKBH1	96	55.858	Notamacropus_eugenii
ENSXETG00000011086	alkbh1	86	59.659	ENSOPRG00000007549	ALKBH1	90	59.659	Ochotona_princeps
ENSXETG00000011086	alkbh1	89	57.221	ENSONIG00000011694	alkbh1	98	56.085	Oreochromis_niloticus
ENSXETG00000011086	alkbh1	84	59.587	ENSOANG00000010841	ALKBH1	91	59.587	Ornithorhynchus_anatinus
ENSXETG00000011086	alkbh1	86	60.795	ENSOCUG00000001438	ALKBH1	90	60.795	Oryctolagus_cuniculus
ENSXETG00000011086	alkbh1	92	56.684	ENSORLG00000010750	alkbh1	99	56.684	Oryzias_latipes
ENSXETG00000011086	alkbh1	92	56.417	ENSORLG00020022193	alkbh1	99	56.417	Oryzias_latipes_hni
ENSXETG00000011086	alkbh1	92	56.417	ENSORLG00015020192	alkbh1	99	56.417	Oryzias_latipes_hsok
ENSXETG00000011086	alkbh1	92	57.568	ENSOMEG00000019337	alkbh1	92	57.568	Oryzias_melastigma
ENSXETG00000011086	alkbh1	84	61.561	ENSOGAG00000006929	ALKBH1	91	61.561	Otolemur_garnettii
ENSXETG00000011086	alkbh1	93	59.162	ENSOARG00000002621	ALKBH1	96	59.162	Ovis_aries
ENSXETG00000011086	alkbh1	86	60.169	ENSPPAG00000041592	ALKBH1	91	60.169	Pan_paniscus
ENSXETG00000011086	alkbh1	91	57.979	ENSPPRG00000014697	ALKBH1	96	57.979	Panthera_pardus
ENSXETG00000011086	alkbh1	91	57.979	ENSPTIG00000014206	ALKBH1	96	57.979	Panthera_tigris_altaica
ENSXETG00000011086	alkbh1	91	57.447	ENSPTRG00000006586	ALKBH1	96	57.447	Pan_troglodytes
ENSXETG00000011086	alkbh1	91	57.979	ENSPANG00000006979	ALKBH1	96	57.979	Papio_anubis
ENSXETG00000011086	alkbh1	88	58.989	ENSPKIG00000014959	alkbh1	94	58.989	Paramormyrops_kingsleyae
ENSXETG00000011086	alkbh1	76	65.147	ENSPSIG00000011527	ALKBH1	97	63.636	Pelodiscus_sinensis
ENSXETG00000011086	alkbh1	85	54.830	ENSPMGG00000010538	alkbh1	98	54.830	Periophthalmus_magnuspinnatus
ENSXETG00000011086	alkbh1	87	58.824	ENSPEMG00000022798	Alkbh1	91	58.824	Peromyscus_maniculatus_bairdii
ENSXETG00000011086	alkbh1	86	62.464	ENSPCIG00000026843	ALKBH1	93	62.464	Phascolarctos_cinereus
ENSXETG00000011086	alkbh1	87	57.224	ENSPFOG00000006775	alkbh1	92	57.224	Poecilia_formosa
ENSXETG00000011086	alkbh1	87	57.224	ENSPLAG00000011128	alkbh1	92	57.224	Poecilia_latipinna
ENSXETG00000011086	alkbh1	91	55.676	ENSPMEG00000019521	alkbh1	97	55.676	Poecilia_mexicana
ENSXETG00000011086	alkbh1	87	57.224	ENSPREG00000011690	alkbh1	92	57.224	Poecilia_reticulata
ENSXETG00000011086	alkbh1	91	57.713	ENSPPYG00000006029	ALKBH1	96	57.713	Pongo_abelii
ENSXETG00000011086	alkbh1	91	58.177	ENSPCAG00000004251	ALKBH1	96	58.177	Procavia_capensis
ENSXETG00000011086	alkbh1	86	61.756	ENSPCOG00000027372	ALKBH1	90	61.756	Propithecus_coquereli
ENSXETG00000011086	alkbh1	86	61.017	ENSPVAG00000006418	ALKBH1	91	61.017	Pteropus_vampyrus
ENSXETG00000011086	alkbh1	87	56.609	ENSPNYG00000003199	alkbh1	99	56.609	Pundamilia_nyererei
ENSXETG00000011086	alkbh1	89	59.218	ENSPNAG00000008625	alkbh1	95	59.218	Pygocentrus_nattereri
ENSXETG00000011086	alkbh1	86	60.057	ENSRNOG00000012264	Alkbh1	90	60.057	Rattus_norvegicus
ENSXETG00000011086	alkbh1	91	57.979	ENSRBIG00000026838	ALKBH1	96	57.979	Rhinopithecus_bieti
ENSXETG00000011086	alkbh1	91	57.979	ENSRROG00000041777	ALKBH1	96	57.979	Rhinopithecus_roxellana
ENSXETG00000011086	alkbh1	91	58.090	ENSSBOG00000014817	ALKBH1	97	58.090	Saimiri_boliviensis_boliviensis
ENSXETG00000011086	alkbh1	85	62.609	ENSSHAG00000017615	ALKBH1	91	62.609	Sarcophilus_harrisii
ENSXETG00000011086	alkbh1	95	54.286	ENSSFOG00015022204	alkbh1	99	54.286	Scleropages_formosus
ENSXETG00000011086	alkbh1	91	57.221	ENSSMAG00000012912	alkbh1	97	57.221	Scophthalmus_maximus
ENSXETG00000011086	alkbh1	90	57.182	ENSSDUG00000021889	alkbh1	95	57.182	Seriola_dumerili
ENSXETG00000011086	alkbh1	87	58.333	ENSSLDG00000023125	alkbh1	92	58.333	Seriola_lalandi_dorsalis
ENSXETG00000011086	alkbh1	89	56.438	ENSSARG00000006523	ALKBH1	94	56.438	Sorex_araneus
ENSXETG00000011086	alkbh1	87	52.299	ENSSPUG00000009359	ALKBH1	94	52.299	Sphenodon_punctatus
ENSXETG00000011086	alkbh1	90	57.260	ENSSPAG00000013486	alkbh1	96	57.260	Stegastes_partitus
ENSXETG00000011086	alkbh1	97	54.523	ENSSSCG00000025906	ALKBH1	99	54.523	Sus_scrofa
ENSXETG00000011086	alkbh1	87	64.387	ENSTGUG00000012335	ALKBH1	96	64.387	Taeniopygia_guttata
ENSXETG00000011086	alkbh1	94	53.989	ENSTRUG00000022051	alkbh1	98	53.989	Takifugu_rubripes
ENSXETG00000011086	alkbh1	95	53.421	ENSTNIG00000003557	alkbh1	99	53.421	Tetraodon_nigroviridis
ENSXETG00000011086	alkbh1	86	60.340	ENSTBEG00000013830	ALKBH1	91	60.340	Tupaia_belangeri
ENSXETG00000011086	alkbh1	74	56.250	ENSTTRG00000009325	ALKBH1	80	56.250	Tursiops_truncatus
ENSXETG00000011086	alkbh1	84	62.139	ENSUAMG00000022446	ALKBH1	89	62.139	Ursus_americanus
ENSXETG00000011086	alkbh1	84	62.428	ENSUMAG00000007173	ALKBH1	89	62.428	Ursus_maritimus
ENSXETG00000011086	alkbh1	97	55.890	ENSVPAG00000001780	ALKBH1	99	55.890	Vicugna_pacos
ENSXETG00000011086	alkbh1	97	56.642	ENSVVUG00000004431	ALKBH1	99	56.642	Vulpes_vulpes
ENSXETG00000011086	alkbh1	84	58.806	ENSXCOG00000009419	alkbh1	96	58.806	Xiphophorus_couchianus
ENSXETG00000011086	alkbh1	91	55.285	ENSXMAG00000015656	alkbh1	95	55.285	Xiphophorus_maculatus