EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000011268 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: -
Full Name: Xenopus tropicalis RNA binding motif protein 38 (rbm38)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 14506 bases
Position: chrGL173417.1:257088-271593
Accession: NM_001006915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000024600	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000024600	-	1262	-	ENSXETP00000024600	222 (aa)	-	G1K3E8

Gene Model

Click here to download ENSXETG00000011268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000011268	rbm38	99	69.869	ENSXETG00000024618	rbm24	99	70.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011268	rbm38	100	74.667	ENSG00000132819	RBM38	94	88.793	Homo_sapiens
ENSXETG00000011268	rbm38	99	56.432	ENSAPOG00000003301	rbm38	77	62.564	Acanthochromis_polyacanthus
ENSXETG00000011268	rbm38	97	65.297	ENSAPOG00000009939	-	92	64.545	Acanthochromis_polyacanthus
ENSXETG00000011268	rbm38	99	65.333	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSXETG00000011268	rbm38	99	56.846	ENSACIG00000000010	rbm38	93	55.508	Amphilophus_citrinellus
ENSXETG00000011268	rbm38	99	56.432	ENSAOCG00000013497	-	77	62.564	Amphiprion_ocellaris
ENSXETG00000011268	rbm38	97	64.220	ENSAOCG00000012559	RBM38	88	64.384	Amphiprion_ocellaris
ENSXETG00000011268	rbm38	99	57.965	ENSAPEG00000013137	rbm38	90	57.965	Amphiprion_percula
ENSXETG00000011268	rbm38	97	61.135	ENSAPEG00000023581	-	93	63.478	Amphiprion_percula
ENSXETG00000011268	rbm38	99	59.912	ENSATEG00000016366	rbm38	75	68.362	Anabas_testudineus
ENSXETG00000011268	rbm38	97	63.478	ENSATEG00000016710	-	93	64.348	Anabas_testudineus
ENSXETG00000011268	rbm38	99	78.082	ENSACAG00000016238	RBM38	90	77.626	Anolis_carolinensis
ENSXETG00000011268	rbm38	99	76.577	ENSANAG00000031959	RBM38	100	75.676	Aotus_nancymaae
ENSXETG00000011268	rbm38	99	64.135	ENSACLG00000019514	-	95	65.106	Astatotilapia_calliptera
ENSXETG00000011268	rbm38	96	57.466	ENSAMXG00000038120	rbm38	71	66.471	Astyanax_mexicanus
ENSXETG00000011268	rbm38	97	64.348	ENSAMXG00000015601	-	92	66.216	Astyanax_mexicanus
ENSXETG00000011268	rbm38	100	72.889	ENSBTAG00000008105	RBM38	92	72.000	Bos_taurus
ENSXETG00000011268	rbm38	76	54.054	WBGene00006321	sup-12	79	67.200	Caenorhabditis_elegans
ENSXETG00000011268	rbm38	100	76.000	ENSCJAG00000019139	RBM38	83	90.099	Callithrix_jacchus
ENSXETG00000011268	rbm38	100	74.667	ENSCAFG00020021943	RBM38	92	74.222	Canis_lupus_dingo
ENSXETG00000011268	rbm38	99	73.874	ENSCHIG00000002609	RBM38	90	72.523	Capra_hircus
ENSXETG00000011268	rbm38	100	73.778	ENSCPOG00000012781	RBM38	92	73.333	Cavia_porcellus
ENSXETG00000011268	rbm38	100	76.000	ENSCCAG00000036872	RBM38	83	90.099	Cebus_capucinus
ENSXETG00000011268	rbm38	100	75.111	ENSCATG00000032133	RBM38	83	90.099	Cercocebus_atys
ENSXETG00000011268	rbm38	100	73.778	ENSCLAG00000005906	RBM38	95	72.889	Chinchilla_lanigera
ENSXETG00000011268	rbm38	100	75.111	ENSCSAG00000015503	RBM38	92	74.667	Chlorocebus_sabaeus
ENSXETG00000011268	rbm38	99	83.105	ENSCPBG00000024059	RBM38	100	82.192	Chrysemys_picta_bellii
ENSXETG00000011268	rbm38	68	60.759	ENSCING00000025102	-	68	61.146	Ciona_intestinalis
ENSXETG00000011268	rbm38	69	61.250	ENSCSAVG00000001132	-	59	61.783	Ciona_savignyi
ENSXETG00000011268	rbm38	100	57.778	ENSCANG00000030105	-	81	56.889	Colobus_angolensis_palliatus
ENSXETG00000011268	rbm38	100	72.889	ENSCGRG00001012928	Rbm38	92	72.000	Cricetulus_griseus_chok1gshd
ENSXETG00000011268	rbm38	99	65.766	ENSCSEG00000004701	-	95	66.953	Cynoglossus_semilaevis
ENSXETG00000011268	rbm38	68	66.452	ENSCSEG00000020943	rbm38	60	61.749	Cynoglossus_semilaevis
ENSXETG00000011268	rbm38	98	56.170	ENSCVAG00000015952	rbm38	76	64.249	Cyprinodon_variegatus
ENSXETG00000011268	rbm38	97	65.517	ENSCVAG00000005472	-	93	65.217	Cyprinodon_variegatus
ENSXETG00000011268	rbm38	97	63.229	ENSDARG00000058818	rbm38	93	62.500	Danio_rerio
ENSXETG00000011268	rbm38	99	75.000	ENSDNOG00000032004	RBM38	100	74.545	Dasypus_novemcinctus
ENSXETG00000011268	rbm38	100	74.222	ENSECAG00000007700	RBM38	92	72.889	Equus_caballus
ENSXETG00000011268	rbm38	100	71.239	ENSEEUG00000013489	RBM38	92	70.796	Erinaceus_europaeus
ENSXETG00000011268	rbm38	99	65.532	ENSELUG00000005849	-	95	64.167	Esox_lucius
ENSXETG00000011268	rbm38	94	58.667	ENSELUG00000000585	-	84	64.767	Esox_lucius
ENSXETG00000011268	rbm38	99	74.324	ENSFCAG00000042916	RBM38	81	90.816	Felis_catus
ENSXETG00000011268	rbm38	78	86.705	ENSFALG00000010805	RBM38	90	86.705	Ficedula_albicollis
ENSXETG00000011268	rbm38	97	68.182	ENSFHEG00000006160	-	92	65.455	Fundulus_heteroclitus
ENSXETG00000011268	rbm38	98	55.882	ENSFHEG00000017748	rbm38	76	62.500	Fundulus_heteroclitus
ENSXETG00000011268	rbm38	82	70.109	ENSGMOG00000016655	-	98	71.892	Gadus_morhua
ENSXETG00000011268	rbm38	99	82.192	ENSGALG00000026081	RBM38	100	82.192	Gallus_gallus
ENSXETG00000011268	rbm38	99	61.538	ENSGACG00000015224	rbm38	87	68.852	Gasterosteus_aculeatus
ENSXETG00000011268	rbm38	97	63.761	ENSGACG00000009873	-	98	65.297	Gasterosteus_aculeatus
ENSXETG00000011268	rbm38	99	84.018	ENSGAGG00000001187	RBM38	100	83.105	Gopherus_agassizii
ENSXETG00000011268	rbm38	99	59.292	ENSHBUG00000012058	rbm38	92	57.919	Haplochromis_burtoni
ENSXETG00000011268	rbm38	99	68.000	ENSHBUG00000011778	-	94	67.556	Haplochromis_burtoni
ENSXETG00000011268	rbm38	100	70.982	ENSHGLG00000015077	RBM38	92	72.768	Heterocephalus_glaber_female
ENSXETG00000011268	rbm38	83	71.429	ENSHCOG00000005622	-	53	72.487	Hippocampus_comes
ENSXETG00000011268	rbm38	60	72.932	ENSHCOG00000019040	rbm38	57	72.932	Hippocampus_comes
ENSXETG00000011268	rbm38	97	67.556	ENSIPUG00000019349	-	92	65.502	Ictalurus_punctatus
ENSXETG00000011268	rbm38	96	50.826	ENSKMAG00000012402	rbm38	79	58.201	Kryptolebias_marmoratus
ENSXETG00000011268	rbm38	99	56.017	ENSLBEG00000018878	rbm38	77	61.538	Labrus_bergylta
ENSXETG00000011268	rbm38	99	64.000	ENSLBEG00000016163	RBM38	100	61.062	Labrus_bergylta
ENSXETG00000011268	rbm38	99	71.806	ENSLOCG00000003456	rbm38	94	71.806	Lepisosteus_oculatus
ENSXETG00000011268	rbm38	100	75.111	ENSMFAG00000043808	RBM38	83	90.099	Macaca_fascicularis
ENSXETG00000011268	rbm38	100	75.111	ENSMMUG00000031391	RBM38	83	90.099	Macaca_mulatta
ENSXETG00000011268	rbm38	100	75.111	ENSMNEG00000034683	RBM38	83	90.099	Macaca_nemestrina
ENSXETG00000011268	rbm38	50	73.874	ENSMLEG00000043261	-	90	73.874	Mandrillus_leucophaeus
ENSXETG00000011268	rbm38	97	62.281	ENSMAMG00000020499	RBM38	93	64.629	Mastacembelus_armatus
ENSXETG00000011268	rbm38	99	57.261	ENSMAMG00000024135	rbm38	93	56.356	Mastacembelus_armatus
ENSXETG00000011268	rbm38	99	68.000	ENSMZEG00005000849	-	94	67.556	Maylandia_zebra
ENSXETG00000011268	rbm38	99	56.846	ENSMZEG00005026036	rbm38	77	63.077	Maylandia_zebra
ENSXETG00000011268	rbm38	100	72.889	ENSMAUG00000021211	Rbm38	92	72.000	Mesocricetus_auratus
ENSXETG00000011268	rbm38	99	75.225	ENSMICG00000038011	RBM38	100	74.324	Microcebus_murinus
ENSXETG00000011268	rbm38	100	73.333	ENSMOCG00000008715	Rbm38	92	72.444	Microtus_ochrogaster
ENSXETG00000011268	rbm38	99	65.179	ENSMMOG00000020051	-	95	64.255	Mola_mola
ENSXETG00000011268	rbm38	99	80.909	ENSMODG00000016458	RBM38	92	80.455	Monodelphis_domestica
ENSXETG00000011268	rbm38	99	54.260	ENSMALG00000022327	rbm38	67	67.308	Monopterus_albus
ENSXETG00000011268	rbm38	82	72.581	ENSMALG00000004680	RBM38	69	72.581	Monopterus_albus
ENSXETG00000011268	rbm38	100	71.556	MGP_CAROLIEiJ_G0024745	Rbm38	92	73.333	Mus_caroli
ENSXETG00000011268	rbm38	100	71.556	ENSMUSG00000027510	Rbm38	92	73.333	Mus_musculus
ENSXETG00000011268	rbm38	100	72.000	MGP_PahariEiJ_G0026186	Rbm38	92	73.778	Mus_pahari
ENSXETG00000011268	rbm38	100	72.000	MGP_SPRETEiJ_G0025665	Rbm38	92	73.778	Mus_spretus
ENSXETG00000011268	rbm38	82	79.348	ENSMPUG00000006518	RBM38	93	78.191	Mustela_putorius_furo
ENSXETG00000011268	rbm38	99	74.324	ENSMLUG00000011140	RBM38	100	72.973	Myotis_lucifugus
ENSXETG00000011268	rbm38	99	65.385	ENSNBRG00000022545	-	95	65.532	Neolamprologus_brichardi
ENSXETG00000011268	rbm38	99	60.352	ENSNBRG00000022685	rbm38	91	59.009	Neolamprologus_brichardi
ENSXETG00000011268	rbm38	52	82.759	ENSMEUG00000005475	-	87	82.759	Notamacropus_eugenii
ENSXETG00000011268	rbm38	100	72.889	ENSODEG00000007980	RBM38	92	72.000	Octodon_degus
ENSXETG00000011268	rbm38	98	57.083	ENSONIG00000017073	rbm38	78	63.590	Oreochromis_niloticus
ENSXETG00000011268	rbm38	98	65.236	ENSONIG00000020324	-	95	65.385	Oreochromis_niloticus
ENSXETG00000011268	rbm38	99	79.091	ENSOANG00000009259	RBM38	83	78.636	Ornithorhynchus_anatinus
ENSXETG00000011268	rbm38	99	55.372	ENSORLG00000012154	rbm38	76	61.538	Oryzias_latipes
ENSXETG00000011268	rbm38	99	59.916	ENSORLG00000027180	-	95	62.447	Oryzias_latipes
ENSXETG00000011268	rbm38	99	55.372	ENSORLG00020017871	rbm38	76	62.245	Oryzias_latipes_hni
ENSXETG00000011268	rbm38	99	59.916	ENSORLG00020020751	-	95	62.447	Oryzias_latipes_hni
ENSXETG00000011268	rbm38	99	59.746	ENSORLG00015017040	-	95	62.712	Oryzias_latipes_hsok
ENSXETG00000011268	rbm38	96	59.276	ENSORLG00015012606	rbm38	89	58.182	Oryzias_latipes_hsok
ENSXETG00000011268	rbm38	99	60.426	ENSOMEG00000023912	-	95	63.830	Oryzias_melastigma
ENSXETG00000011268	rbm38	99	54.959	ENSOMEG00000006805	rbm38	76	61.538	Oryzias_melastigma
ENSXETG00000011268	rbm38	99	75.225	ENSOGAG00000029136	RBM38	90	74.324	Otolemur_garnettii
ENSXETG00000011268	rbm38	99	74.324	ENSPPRG00000009507	RBM38	81	90.816	Panthera_pardus
ENSXETG00000011268	rbm38	58	86.719	ENSPTRG00000045845	-	70	86.719	Pan_troglodytes
ENSXETG00000011268	rbm38	86	78.974	ENSPTRG00000013661	RBM38	83	90.099	Pan_troglodytes
ENSXETG00000011268	rbm38	100	75.111	ENSPANG00000020919	-	83	90.099	Papio_anubis
ENSXETG00000011268	rbm38	97	63.303	ENSPANG00000033127	-	91	61.187	Papio_anubis
ENSXETG00000011268	rbm38	99	64.255	ENSPKIG00000025417	rbm38	95	63.404	Paramormyrops_kingsleyae
ENSXETG00000011268	rbm38	99	65.022	ENSPKIG00000018122	-	95	84.685	Paramormyrops_kingsleyae
ENSXETG00000011268	rbm38	99	81.279	ENSPSIG00000011649	RBM38	92	80.365	Pelodiscus_sinensis
ENSXETG00000011268	rbm38	99	57.563	ENSPMGG00000011343	rbm38	75	64.021	Periophthalmus_magnuspinnatus
ENSXETG00000011268	rbm38	97	61.638	ENSPMGG00000017094	-	93	63.519	Periophthalmus_magnuspinnatus
ENSXETG00000011268	rbm38	99	80.455	ENSPCIG00000013648	RBM38	92	79.091	Phascolarctos_cinereus
ENSXETG00000011268	rbm38	98	55.649	ENSPFOG00000011658	rbm38	76	62.887	Poecilia_formosa
ENSXETG00000011268	rbm38	97	64.530	ENSPLAG00000002500	-	93	64.224	Poecilia_latipinna
ENSXETG00000011268	rbm38	98	55.649	ENSPLAG00000005218	rbm38	76	62.887	Poecilia_latipinna
ENSXETG00000011268	rbm38	98	55.649	ENSPMEG00000015770	rbm38	76	62.887	Poecilia_mexicana
ENSXETG00000011268	rbm38	98	56.067	ENSPREG00000007398	rbm38	76	63.402	Poecilia_reticulata
ENSXETG00000011268	rbm38	99	74.775	ENSPCOG00000026201	RBM38	80	91.837	Propithecus_coquereli
ENSXETG00000011268	rbm38	99	48.649	ENSPVAG00000006457	RBM38	91	47.748	Pteropus_vampyrus
ENSXETG00000011268	rbm38	99	59.375	ENSPNYG00000021373	rbm38	92	57.991	Pundamilia_nyererei
ENSXETG00000011268	rbm38	99	68.000	ENSPNYG00000019727	-	100	85.470	Pundamilia_nyererei
ENSXETG00000011268	rbm38	97	66.816	ENSPNAG00000015123	-	96	74.242	Pygocentrus_nattereri
ENSXETG00000011268	rbm38	99	60.435	ENSPNAG00000010596	rbm38	78	69.149	Pygocentrus_nattereri
ENSXETG00000011268	rbm38	100	73.778	ENSRNOG00000006420	Rbm38	92	72.889	Rattus_norvegicus
ENSXETG00000011268	rbm38	100	63.111	ENSRROG00000036388	-	91	62.222	Rhinopithecus_roxellana
ENSXETG00000011268	rbm38	99	75.676	ENSSBOG00000031053	RBM38	94	90.099	Saimiri_boliviensis_boliviensis
ENSXETG00000011268	rbm38	97	61.468	ENSSFOG00015004453	rbm38	92	64.706	Scleropages_formosus
ENSXETG00000011268	rbm38	99	58.091	ENSSDUG00000022611	rbm38	77	64.615	Seriola_dumerili
ENSXETG00000011268	rbm38	97	62.609	ENSSDUG00000021082	RBM38	93	63.478	Seriola_dumerili
ENSXETG00000011268	rbm38	99	60.619	ENSSLDG00000010845	rbm38	92	59.292	Seriola_lalandi_dorsalis
ENSXETG00000011268	rbm38	97	63.478	ENSSLDG00000011778	RBM38	93	64.348	Seriola_lalandi_dorsalis
ENSXETG00000011268	rbm38	99	56.846	ENSSPAG00000011113	rbm38	77	62.564	Stegastes_partitus
ENSXETG00000011268	rbm38	97	61.927	ENSSPAG00000020989	RBM38	92	64.840	Stegastes_partitus
ENSXETG00000011268	rbm38	100	74.222	ENSSSCG00000007504	RBM38	92	73.778	Sus_scrofa
ENSXETG00000011268	rbm38	99	57.741	ENSTRUG00000024954	rbm38	76	65.789	Takifugu_rubripes
ENSXETG00000011268	rbm38	99	61.411	ENSTRUG00000019869	-	95	63.136	Takifugu_rubripes
ENSXETG00000011268	rbm38	99	64.286	ENSTNIG00000007093	-	100	65.778	Tetraodon_nigroviridis
ENSXETG00000011268	rbm38	100	72.889	ENSUAMG00000019780	RBM38	92	72.889	Ursus_americanus
ENSXETG00000011268	rbm38	100	74.667	ENSVVUG00000017246	RBM38	92	74.222	Vulpes_vulpes
ENSXETG00000011268	rbm38	58	76.866	ENSXCOG00000017324	-	60	76.866	Xiphophorus_couchianus
ENSXETG00000011268	rbm38	98	55.882	ENSXMAG00000023662	rbm38	76	62.694	Xiphophorus_maculatus