EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000011386 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpu
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 8863 bases
Position: chrGL173567.1:90385-99247
Accession: XB-GENE-490782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000024873	SAP	PF02037.27	2.6e-11	1	1
ENSXETP00000057129	SAP	PF02037.27	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000024873	-	2478	-	ENSXETP00000024873	790 (aa)	-	Q28DK6
ENSXETT00000057129	-	2418	-	ENSXETP00000057129	805 (aa)	-	F6RU04

Gene Model

Click here to download ENSXETG00000011386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000011386	hnrnpu	85	38.362	ENSXETG00000006015	hnrnpul2	86	38.201

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011386	hnrnpu	99	68.396	ENSG00000153187	HNRNPU	99	79.933	Homo_sapiens
ENSXETG00000011386	hnrnpu	99	52.061	ENSAPOG00000017400	hnrnpub	99	46.217	Acanthochromis_polyacanthus
ENSXETG00000011386	hnrnpu	99	67.178	ENSAMEG00000009145	HNRNPU	99	65.023	Ailuropoda_melanoleuca
ENSXETG00000011386	hnrnpu	80	86.957	ENSACIG00000012138	hnrnpub	99	51.961	Amphilophus_citrinellus
ENSXETG00000011386	hnrnpu	99	51.594	ENSAOCG00000015843	hnrnpub	99	50.767	Amphiprion_ocellaris
ENSXETG00000011386	hnrnpu	99	51.594	ENSAPEG00000014679	hnrnpub	99	50.767	Amphiprion_percula
ENSXETG00000011386	hnrnpu	96	51.469	ENSATEG00000016178	hnrnpub	84	52.355	Anabas_testudineus
ENSXETG00000011386	hnrnpu	81	78.846	ENSACAG00000004511	HNRNPU	76	87.805	Anolis_carolinensis
ENSXETG00000011386	hnrnpu	99	69.767	ENSANAG00000033895	-	99	75.769	Aotus_nancymaae
ENSXETG00000011386	hnrnpu	99	52.934	ENSACLG00000008165	hnrnpub	99	51.232	Astatotilapia_calliptera
ENSXETG00000011386	hnrnpu	99	68.214	ENSBTAG00000007606	HNRNPU	99	66.548	Bos_taurus
ENSXETG00000011386	hnrnpu	99	66.981	ENSCJAG00000016914	HNRNPU	99	75.588	Callithrix_jacchus
ENSXETG00000011386	hnrnpu	99	68.275	ENSCAFG00020000918	HNRNPU	99	65.952	Canis_lupus_dingo
ENSXETG00000011386	hnrnpu	99	69.719	ENSCHIG00000004900	HNRNPU	99	67.354	Capra_hircus
ENSXETG00000011386	hnrnpu	99	68.220	ENSCPOG00000011887	HNRNPU	99	65.505	Cavia_porcellus
ENSXETG00000011386	hnrnpu	99	69.890	ENSCCAG00000037859	-	99	75.949	Cebus_capucinus
ENSXETG00000011386	hnrnpu	99	69.024	ENSCATG00000035273	HNRNPU	99	75.769	Cercocebus_atys
ENSXETG00000011386	hnrnpu	99	68.220	ENSCLAG00000007100	HNRNPU	99	65.808	Chinchilla_lanigera
ENSXETG00000011386	hnrnpu	99	68.396	ENSCSAG00000009219	HNRNPU	99	67.476	Chlorocebus_sabaeus
ENSXETG00000011386	hnrnpu	80	90.698	ENSCHOG00000001387	HNRNPU	76	92.683	Choloepus_hoffmanni
ENSXETG00000011386	hnrnpu	75	74.916	ENSCPBG00000009415	HNRNPU	98	63.951	Chrysemys_picta_bellii
ENSXETG00000011386	hnrnpu	99	69.278	ENSCANG00000022780	HNRNPU	99	66.950	Colobus_angolensis_palliatus
ENSXETG00000011386	hnrnpu	99	69.767	ENSCGRG00001020525	Hnrnpu	99	66.307	Cricetulus_griseus_chok1gshd
ENSXETG00000011386	hnrnpu	75	82.222	ENSCSEG00000010804	hnrnpub	89	60.158	Cynoglossus_semilaevis
ENSXETG00000011386	hnrnpu	81	82.222	ENSCVAG00000004280	hnrnpub	83	85.000	Cyprinodon_variegatus
ENSXETG00000011386	hnrnpu	81	68.254	ENSDARG00000015206	hnrnpua	99	50.299	Danio_rerio
ENSXETG00000011386	hnrnpu	80	82.222	ENSDARG00000004735	hnrnpub	99	50.000	Danio_rerio
ENSXETG00000011386	hnrnpu	88	90.698	ENSDNOG00000000215	HNRNPU	92	92.683	Dasypus_novemcinctus
ENSXETG00000011386	hnrnpu	79	90.909	ENSDORG00000015491	Hnrnpu	99	66.303	Dipodomys_ordii
ENSXETG00000011386	hnrnpu	87	79.866	ENSETEG00000014565	HNRNPU	99	65.233	Echinops_telfairi
ENSXETG00000011386	hnrnpu	99	68.154	ENSEASG00005003017	HNRNPU	99	65.595	Equus_asinus_asinus
ENSXETG00000011386	hnrnpu	99	68.154	ENSECAG00000007955	HNRNPU	99	65.476	Equus_caballus
ENSXETG00000011386	hnrnpu	77	54.000	ENSELUG00000010733	hnrnpub	99	48.811	Esox_lucius
ENSXETG00000011386	hnrnpu	99	49.071	ENSELUG00000011966	hnrnpua	63	80.000	Esox_lucius
ENSXETG00000011386	hnrnpu	99	68.116	ENSFCAG00000002156	HNRNPU	99	75.588	Felis_catus
ENSXETG00000011386	hnrnpu	90	80.270	ENSFDAG00000006026	HNRNPU	95	90.244	Fukomys_damarensis
ENSXETG00000011386	hnrnpu	75	62.025	ENSFHEG00000022639	hnrnpub	80	52.933	Fundulus_heteroclitus
ENSXETG00000011386	hnrnpu	80	54.299	ENSGMOG00000001755	hnrnpub	99	49.761	Gadus_morhua
ENSXETG00000011386	hnrnpu	75	74.342	ENSGALG00000010671	HNRNPU	88	95.000	Gallus_gallus
ENSXETG00000011386	hnrnpu	59	61.966	ENSGAFG00000009369	hnrnpub	99	48.284	Gambusia_affinis
ENSXETG00000011386	hnrnpu	84	54.101	ENSGACG00000004679	hnrnpub	99	49.247	Gasterosteus_aculeatus
ENSXETG00000011386	hnrnpu	99	69.146	ENSGGOG00000004061	HNRNPU	99	75.949	Gorilla_gorilla
ENSXETG00000011386	hnrnpu	77	53.372	ENSHBUG00000012290	hnrnpub	99	50.118	Haplochromis_burtoni
ENSXETG00000011386	hnrnpu	99	69.730	ENSHGLG00000010594	-	99	65.431	Heterocephalus_glaber_female
ENSXETG00000011386	hnrnpu	80	88.372	ENSHGLG00100015093	HNRNPU	99	90.244	Heterocephalus_glaber_male
ENSXETG00000011386	hnrnpu	76	50.588	ENSHCOG00000020091	hnrnpub	86	48.659	Hippocampus_comes
ENSXETG00000011386	hnrnpu	73	80.000	ENSIPUG00000007749	hnrnpu	98	85.000	Ictalurus_punctatus
ENSXETG00000011386	hnrnpu	99	68.660	ENSJJAG00000011371	Hnrnpu	99	66.197	Jaculus_jaculus
ENSXETG00000011386	hnrnpu	77	52.416	ENSKMAG00000004532	hnrnpub	99	48.661	Kryptolebias_marmoratus
ENSXETG00000011386	hnrnpu	77	52.907	ENSLBEG00000022520	hnrnpub	99	49.299	Labrus_bergylta
ENSXETG00000011386	hnrnpu	100	59.777	ENSLACG00000017463	HNRNPU	99	58.293	Latimeria_chalumnae
ENSXETG00000011386	hnrnpu	87	58.114	ENSLOCG00000016652	hnrnpua	99	56.459	Lepisosteus_oculatus
ENSXETG00000011386	hnrnpu	99	68.949	ENSLAFG00000021377	HNRNPU	99	66.143	Loxodonta_africana
ENSXETG00000011386	hnrnpu	99	69.024	ENSMFAG00000037308	HNRNPU	99	75.769	Macaca_fascicularis
ENSXETG00000011386	hnrnpu	99	68.856	ENSMMUG00000021098	HNRNPU	99	67.604	Macaca_mulatta
ENSXETG00000011386	hnrnpu	99	69.024	ENSMNEG00000043645	HNRNPU	99	75.769	Macaca_nemestrina
ENSXETG00000011386	hnrnpu	79	84.444	ENSMAMG00000007196	hnrnpub	99	49.302	Mastacembelus_armatus
ENSXETG00000011386	hnrnpu	99	53.056	ENSMZEG00005003185	hnrnpub	99	51.355	Maylandia_zebra
ENSXETG00000011386	hnrnpu	99	69.608	ENSMAUG00000008842	Hnrnpu	99	67.521	Mesocricetus_auratus
ENSXETG00000011386	hnrnpu	99	69.024	ENSMICG00000004616	HNRNPU	99	75.949	Microcebus_murinus
ENSXETG00000011386	hnrnpu	99	70.197	ENSMOCG00000015623	Hnrnpu	99	67.319	Microtus_ochrogaster
ENSXETG00000011386	hnrnpu	75	78.383	ENSMODG00000006515	HNRNPU	99	63.636	Monodelphis_domestica
ENSXETG00000011386	hnrnpu	75	55.521	ENSMALG00000018243	hnrnpub	88	52.400	Monopterus_albus
ENSXETG00000011386	hnrnpu	99	68.530	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	67.319	Mus_caroli
ENSXETG00000011386	hnrnpu	99	68.530	ENSMUSG00000039630	Hnrnpu	99	67.195	Mus_musculus
ENSXETG00000011386	hnrnpu	99	67.922	MGP_PahariEiJ_G0028193	Hnrnpu	99	66.626	Mus_pahari
ENSXETG00000011386	hnrnpu	99	68.530	MGP_SPRETEiJ_G0015761	Hnrnpu	99	67.195	Mus_spretus
ENSXETG00000011386	hnrnpu	99	68.299	ENSMLUG00000000475	HNRNPU	99	64.048	Myotis_lucifugus
ENSXETG00000011386	hnrnpu	99	70.197	ENSNGAG00000019075	Hnrnpu	99	66.910	Nannospalax_galili
ENSXETG00000011386	hnrnpu	77	54.050	ENSNBRG00000017855	hnrnpub	99	49.882	Neolamprologus_brichardi
ENSXETG00000011386	hnrnpu	97	63.145	ENSMEUG00000000541	HNRNPU	98	61.950	Notamacropus_eugenii
ENSXETG00000011386	hnrnpu	68	82.243	ENSODEG00000014458	-	99	80.303	Octodon_degus
ENSXETG00000011386	hnrnpu	80	84.783	ENSONIG00000001260	hnrnpub	99	49.522	Oreochromis_niloticus
ENSXETG00000011386	hnrnpu	97	66.747	ENSOCUG00000014469	HNRNPU	92	65.422	Oryctolagus_cuniculus
ENSXETG00000011386	hnrnpu	99	49.594	ENSORLG00000016114	hnrnpub	99	49.304	Oryzias_latipes
ENSXETG00000011386	hnrnpu	77	52.838	ENSORLG00020005363	hnrnpub	99	49.304	Oryzias_latipes_hni
ENSXETG00000011386	hnrnpu	77	52.693	ENSORLG00015001190	hnrnpub	99	49.072	Oryzias_latipes_hsok
ENSXETG00000011386	hnrnpu	73	56.271	ENSOMEG00000014951	hnrnpub	99	48.235	Oryzias_melastigma
ENSXETG00000011386	hnrnpu	99	68.516	ENSOGAG00000014024	HNRNPU	99	66.148	Otolemur_garnettii
ENSXETG00000011386	hnrnpu	82	79.832	ENSOARG00000004985	HNRNPU	85	92.683	Ovis_aries
ENSXETG00000011386	hnrnpu	99	69.146	ENSPPAG00000038652	HNRNPU	99	75.949	Pan_paniscus
ENSXETG00000011386	hnrnpu	99	66.588	ENSPPRG00000002662	HNRNPU	99	75.588	Panthera_pardus
ENSXETG00000011386	hnrnpu	99	69.146	ENSPTRG00000002182	HNRNPU	99	75.949	Pan_troglodytes
ENSXETG00000011386	hnrnpu	99	69.024	ENSPANG00000011643	HNRNPU	99	75.769	Papio_anubis
ENSXETG00000011386	hnrnpu	99	56.325	ENSPKIG00000022332	hnrnpub	99	55.636	Paramormyrops_kingsleyae
ENSXETG00000011386	hnrnpu	99	55.102	ENSPKIG00000006885	hnrnpua	99	54.162	Paramormyrops_kingsleyae
ENSXETG00000011386	hnrnpu	98	67.687	ENSPCIG00000008657	HNRNPU	99	75.045	Phascolarctos_cinereus
ENSXETG00000011386	hnrnpu	56	63.576	ENSPFOG00000002908	hnrnpub	99	48.284	Poecilia_formosa
ENSXETG00000011386	hnrnpu	56	63.576	ENSPLAG00000004160	hnrnpub	99	48.739	Poecilia_latipinna
ENSXETG00000011386	hnrnpu	99	67.531	ENSPCOG00000003883	-	99	64.891	Propithecus_coquereli
ENSXETG00000011386	hnrnpu	99	68.613	ENSPCOG00000018655	-	99	75.769	Propithecus_coquereli
ENSXETG00000011386	hnrnpu	99	66.588	ENSPVAG00000002581	HNRNPU	99	65.228	Pteropus_vampyrus
ENSXETG00000011386	hnrnpu	77	54.197	ENSPNYG00000021642	hnrnpub	99	50.000	Pundamilia_nyererei
ENSXETG00000011386	hnrnpu	75	61.719	ENSPNAG00000001055	hnrnpub	99	53.533	Pygocentrus_nattereri
ENSXETG00000011386	hnrnpu	99	70.111	ENSRNOG00000033790	Hnrnpu	99	67.359	Rattus_norvegicus
ENSXETG00000011386	hnrnpu	99	69.100	ENSRBIG00000031519	HNRNPU	99	65.468	Rhinopithecus_bieti
ENSXETG00000011386	hnrnpu	99	69.119	ENSRROG00000041642	HNRNPU	99	65.833	Rhinopithecus_roxellana
ENSXETG00000011386	hnrnpu	99	56.033	ENSSFOG00015019004	hnrnpu	99	55.353	Scleropages_formosus
ENSXETG00000011386	hnrnpu	99	55.869	ENSSFOG00015001124	hnrnpub	99	56.744	Scleropages_formosus
ENSXETG00000011386	hnrnpu	77	51.669	ENSSMAG00000003607	hnrnpub	99	48.970	Scophthalmus_maximus
ENSXETG00000011386	hnrnpu	77	53.275	ENSSDUG00000005912	hnrnpub	99	50.058	Seriola_dumerili
ENSXETG00000011386	hnrnpu	77	53.130	ENSSLDG00000004899	hnrnpub	99	50.058	Seriola_lalandi_dorsalis
ENSXETG00000011386	hnrnpu	75	78.523	ENSSPUG00000011393	HNRNPU	99	64.209	Sphenodon_punctatus
ENSXETG00000011386	hnrnpu	81	67.742	ENSSPAG00000011853	hnrnpub	99	51.182	Stegastes_partitus
ENSXETG00000011386	hnrnpu	99	69.841	ENSSSCG00000010877	HNRNPU	99	67.840	Sus_scrofa
ENSXETG00000011386	hnrnpu	99	49.943	ENSTRUG00000007759	hnrnpub	99	48.829	Takifugu_rubripes
ENSXETG00000011386	hnrnpu	99	49.931	ENSTNIG00000009725	hnrnpub	98	80.000	Tetraodon_nigroviridis
ENSXETG00000011386	hnrnpu	68	87.879	ENSTTRG00000005281	HNRNPU	69	87.879	Tursiops_truncatus
ENSXETG00000011386	hnrnpu	99	71.500	ENSUAMG00000021120	HNRNPU	99	75.769	Ursus_americanus
ENSXETG00000011386	hnrnpu	99	67.419	ENSUMAG00000012322	HNRNPU	87	93.939	Ursus_maritimus
ENSXETG00000011386	hnrnpu	77	75.370	ENSVPAG00000010520	HNRNPU	81	92.683	Vicugna_pacos
ENSXETG00000011386	hnrnpu	99	68.275	ENSVVUG00000026524	HNRNPU	99	65.952	Vulpes_vulpes
ENSXETG00000011386	hnrnpu	59	61.966	ENSXMAG00000010356	hnrnpub	99	48.169	Xiphophorus_maculatus