EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000011622 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 11212 bases
Position: chrGL173156.1:133803-145014
Accession: XB-GENE-1007876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000025402	RRM_1	PF00076.22	5.2e-32	1	2
ENSXETP00000025402	RRM_1	PF00076.22	5.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000025402	-	2088	-	ENSXETP00000025402	695 (aa)	-	F7CMF8

Gene Model

Click here to download ENSXETG00000011622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000011622	raver1	86	37.651	ENSXETG00000020406	raver2	98	37.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011622	raver1	100	55.932	ENSG00000161847	RAVER1	100	56.454	Homo_sapiens
ENSXETG00000011622	raver1	93	50.367	ENSAPOG00000017267	raver1	92	48.752	Acanthochromis_polyacanthus
ENSXETG00000011622	raver1	100	52.934	ENSAMEG00000011738	RAVER1	98	54.379	Ailuropoda_melanoleuca
ENSXETG00000011622	raver1	93	50.592	ENSAOCG00000005128	raver1	87	50.289	Amphiprion_ocellaris
ENSXETG00000011622	raver1	94	49.633	ENSAPEG00000010854	raver1	100	49.079	Amphiprion_percula
ENSXETG00000011622	raver1	95	52.299	ENSATEG00000021004	raver1	91	52.299	Anabas_testudineus
ENSXETG00000011622	raver1	82	55.882	ENSACAG00000008386	-	90	56.522	Anolis_carolinensis
ENSXETG00000011622	raver1	100	54.316	ENSANAG00000028226	RAVER1	98	56.217	Aotus_nancymaae
ENSXETG00000011622	raver1	94	50.877	ENSACLG00000018492	raver1	90	51.679	Astatotilapia_calliptera
ENSXETG00000011622	raver1	96	50.423	ENSAMXG00000005132	raver1	100	50.539	Astyanax_mexicanus
ENSXETG00000011622	raver1	89	67.568	ENSBTAG00000015721	RAVER1	97	67.568	Bos_taurus
ENSXETG00000011622	raver1	100	53.525	ENSCJAG00000005671	RAVER1	98	55.397	Callithrix_jacchus
ENSXETG00000011622	raver1	100	55.214	ENSCAFG00000017861	RAVER1	98	56.702	Canis_familiaris
ENSXETG00000011622	raver1	100	55.214	ENSCAFG00020024449	RAVER1	100	56.702	Canis_lupus_dingo
ENSXETG00000011622	raver1	100	52.694	ENSCHIG00000006718	RAVER1	89	65.306	Capra_hircus
ENSXETG00000011622	raver1	75	68.919	ENSTSYG00000027107	RAVER1	100	56.928	Carlito_syrichta
ENSXETG00000011622	raver1	91	53.945	ENSCAPG00000002269	RAVER1	100	56.515	Cavia_aperea
ENSXETG00000011622	raver1	94	56.267	ENSCPOG00000001008	RAVER1	100	56.110	Cavia_porcellus
ENSXETG00000011622	raver1	100	54.400	ENSCCAG00000031723	RAVER1	98	56.308	Cebus_capucinus
ENSXETG00000011622	raver1	100	54.474	ENSCATG00000043863	RAVER1	98	56.225	Cercocebus_atys
ENSXETG00000011622	raver1	100	55.204	ENSCLAG00000009336	RAVER1	100	55.774	Chinchilla_lanigera
ENSXETG00000011622	raver1	100	54.414	ENSCSAG00000007317	RAVER1	84	56.037	Chlorocebus_sabaeus
ENSXETG00000011622	raver1	95	57.995	ENSCPBG00000005349	-	96	57.995	Chrysemys_picta_bellii
ENSXETG00000011622	raver1	100	54.605	ENSCANG00000008337	RAVER1	98	56.225	Colobus_angolensis_palliatus
ENSXETG00000011622	raver1	95	55.249	ENSCGRG00001013260	-	100	55.177	Cricetulus_griseus_chok1gshd
ENSXETG00000011622	raver1	95	55.249	ENSCGRG00000015138	-	100	55.177	Cricetulus_griseus_crigri
ENSXETG00000011622	raver1	99	48.204	ENSCSEG00000021092	raver1	95	49.795	Cynoglossus_semilaevis
ENSXETG00000011622	raver1	100	48.889	ENSCVAG00000013971	raver1	100	48.889	Cyprinodon_variegatus
ENSXETG00000011622	raver1	94	52.276	ENSDARG00000052617	raver1	90	52.786	Danio_rerio
ENSXETG00000011622	raver1	65	62.829	ENSDNOG00000035742	-	70	57.979	Dasypus_novemcinctus
ENSXETG00000011622	raver1	100	50.066	ENSDORG00000010106	-	100	50.196	Dipodomys_ordii
ENSXETG00000011622	raver1	63	52.459	ENSETEG00000008201	-	78	51.316	Echinops_telfairi
ENSXETG00000011622	raver1	53	34.118	ENSEBUG00000003030	RAVER1	50	33.933	Eptatretus_burgeri
ENSXETG00000011622	raver1	65	78.125	ENSEASG00005010544	-	90	66.118	Equus_asinus_asinus
ENSXETG00000011622	raver1	100	53.867	ENSECAG00000024966	RAVER1	98	55.644	Equus_caballus
ENSXETG00000011622	raver1	96	50.576	ENSELUG00000023287	raver1	100	49.933	Esox_lucius
ENSXETG00000011622	raver1	100	54.150	ENSFCAG00000009435	RAVER1	98	55.439	Felis_catus
ENSXETG00000011622	raver1	94	56.346	ENSFDAG00000015113	RAVER1	100	55.000	Fukomys_damarensis
ENSXETG00000011622	raver1	69	64.567	ENSGMOG00000003649	raver1	67	64.567	Gadus_morhua
ENSXETG00000011622	raver1	66	42.553	ENSGALG00000050608	-	56	40.891	Gallus_gallus
ENSXETG00000011622	raver1	94	49.712	ENSGAFG00000015944	raver1	90	51.009	Gambusia_affinis
ENSXETG00000011622	raver1	64	64.706	ENSGACG00000013818	raver1	66	64.000	Gasterosteus_aculeatus
ENSXETG00000011622	raver1	80	74.052	ENSGAGG00000011748	-	96	59.718	Gopherus_agassizii
ENSXETG00000011622	raver1	100	55.671	ENSGGOG00000006015	RAVER1	98	56.193	Gorilla_gorilla
ENSXETG00000011622	raver1	94	50.515	ENSHBUG00000021210	raver1	90	51.462	Haplochromis_burtoni
ENSXETG00000011622	raver1	94	57.004	ENSHGLG00000015460	RAVER1	100	55.585	Heterocephalus_glaber_female
ENSXETG00000011622	raver1	94	57.004	ENSHGLG00100000812	RAVER1	100	55.585	Heterocephalus_glaber_male
ENSXETG00000011622	raver1	98	48.883	ENSHCOG00000000449	raver1	91	50.418	Hippocampus_comes
ENSXETG00000011622	raver1	95	53.266	ENSIPUG00000013153	raver1	100	50.996	Ictalurus_punctatus
ENSXETG00000011622	raver1	100	54.593	ENSSTOG00000003241	RAVER1	100	55.774	Ictidomys_tridecemlineatus
ENSXETG00000011622	raver1	100	54.690	ENSJJAG00000018219	-	100	55.218	Jaculus_jaculus
ENSXETG00000011622	raver1	100	49.803	ENSKMAG00000017355	raver1	90	52.838	Kryptolebias_marmoratus
ENSXETG00000011622	raver1	88	48.571	ENSLBEG00000008268	raver1	91	49.023	Labrus_bergylta
ENSXETG00000011622	raver1	81	71.910	ENSLACG00000005809	-	87	71.910	Latimeria_chalumnae
ENSXETG00000011622	raver1	95	53.709	ENSLOCG00000007500	raver1	100	51.711	Lepisosteus_oculatus
ENSXETG00000011622	raver1	100	54.843	ENSLAFG00000003664	-	100	54.928	Loxodonta_africana
ENSXETG00000011622	raver1	100	54.342	ENSMFAG00000037977	RAVER1	98	56.094	Macaca_fascicularis
ENSXETG00000011622	raver1	100	54.211	ENSMMUG00000014897	RAVER1	98	55.963	Macaca_mulatta
ENSXETG00000011622	raver1	100	54.211	ENSMNEG00000028390	RAVER1	98	55.963	Macaca_nemestrina
ENSXETG00000011622	raver1	100	54.474	ENSMLEG00000041959	RAVER1	98	56.225	Mandrillus_leucophaeus
ENSXETG00000011622	raver1	99	49.914	ENSMAMG00000012059	raver1	95	48.343	Mastacembelus_armatus
ENSXETG00000011622	raver1	94	50.877	ENSMZEG00005019002	raver1	90	52.457	Maylandia_zebra
ENSXETG00000011622	raver1	95	54.959	ENSMAUG00000017948	-	100	53.927	Mesocricetus_auratus
ENSXETG00000011622	raver1	99	55.345	ENSMICG00000010326	RAVER1	99	57.317	Microcebus_murinus
ENSXETG00000011622	raver1	95	55.525	ENSMOCG00000015553	-	100	55.308	Microtus_ochrogaster
ENSXETG00000011622	raver1	97	50.693	ENSMMOG00000012093	raver1	100	49.606	Mola_mola
ENSXETG00000011622	raver1	92	57.687	ENSMODG00000005584	-	86	57.918	Monodelphis_domestica
ENSXETG00000011622	raver1	96	48.596	ENSMALG00000016569	raver1	93	49.577	Monopterus_albus
ENSXETG00000011622	raver1	94	62.500	MGP_CAROLIEiJ_G0031860	-	100	55.105	Mus_caroli
ENSXETG00000011622	raver1	95	55.540	ENSMUSG00000010205	Raver1	98	55.962	Mus_musculus
ENSXETG00000011622	raver1	95	53.940	MGP_PahariEiJ_G0014726	-	98	54.933	Mus_pahari
ENSXETG00000011622	raver1	95	55.540	MGP_SPRETEiJ_G0032984	-	98	55.962	Mus_spretus
ENSXETG00000011622	raver1	94	55.322	ENSMPUG00000006712	RAVER1	98	54.724	Mustela_putorius_furo
ENSXETG00000011622	raver1	94	64.853	ENSMLUG00000012328	RAVER1	100	56.275	Myotis_lucifugus
ENSXETG00000011622	raver1	95	55.062	ENSNGAG00000001260	-	100	53.887	Nannospalax_galili
ENSXETG00000011622	raver1	100	45.563	ENSNBRG00000010139	raver1	100	46.003	Neolamprologus_brichardi
ENSXETG00000011622	raver1	100	54.843	ENSNLEG00000012181	RAVER1	98	56.021	Nomascus_leucogenys
ENSXETG00000011622	raver1	89	57.355	ENSMEUG00000003281	-	100	57.355	Notamacropus_eugenii
ENSXETG00000011622	raver1	54	63.359	ENSOPRG00000005855	-	51	63.359	Ochotona_princeps
ENSXETG00000011622	raver1	100	54.267	ENSODEG00000016260	RAVER1	100	55.570	Octodon_degus
ENSXETG00000011622	raver1	94	51.901	ENSONIG00000001559	raver1	98	52.471	Oreochromis_niloticus
ENSXETG00000011622	raver1	100	53.175	ENSOCUG00000020918	RAVER1	100	52.737	Oryctolagus_cuniculus
ENSXETG00000011622	raver1	96	50.284	ENSORLG00000005458	raver1	94	50.069	Oryzias_latipes
ENSXETG00000011622	raver1	96	50.646	ENSORLG00020004392	raver1	94	50.698	Oryzias_latipes_hni
ENSXETG00000011622	raver1	96	50.716	ENSORLG00015017222	raver1	94	50.628	Oryzias_latipes_hsok
ENSXETG00000011622	raver1	96	85.714	ENSOMEG00000023956	raver1	93	85.714	Oryzias_melastigma
ENSXETG00000011622	raver1	100	54.107	ENSOGAG00000011071	RAVER1	98	55.409	Otolemur_garnettii
ENSXETG00000011622	raver1	100	50.329	ENSOARG00000015886	RAVER1	98	51.643	Ovis_aries
ENSXETG00000011622	raver1	100	55.932	ENSPPAG00000002611	RAVER1	98	56.454	Pan_paniscus
ENSXETG00000011622	raver1	100	54.167	ENSPPRG00000009912	RAVER1	98	55.614	Panthera_pardus
ENSXETG00000011622	raver1	100	55.932	ENSPTRG00000010466	RAVER1	98	56.454	Pan_troglodytes
ENSXETG00000011622	raver1	100	54.474	ENSPANG00000004122	RAVER1	98	56.225	Papio_anubis
ENSXETG00000011622	raver1	95	55.586	ENSPEMG00000016411	-	100	55.366	Peromyscus_maniculatus_bairdii
ENSXETG00000011622	raver1	96	59.091	ENSPCIG00000018695	-	97	59.317	Phascolarctos_cinereus
ENSXETG00000011622	raver1	94	49.296	ENSPFOG00000007016	raver1	90	50.000	Poecilia_formosa
ENSXETG00000011622	raver1	79	66.964	ENSPLAG00000020793	raver1	76	65.934	Poecilia_latipinna
ENSXETG00000011622	raver1	94	49.711	ENSPMEG00000011220	raver1	90	51.012	Poecilia_mexicana
ENSXETG00000011622	raver1	94	49.408	ENSPREG00000006864	raver1	89	49.408	Poecilia_reticulata
ENSXETG00000011622	raver1	100	54.702	ENSPPYG00000010514	RAVER1	84	55.145	Pongo_abelii
ENSXETG00000011622	raver1	100	53.745	ENSPCOG00000026605	RAVER1	98	55.614	Propithecus_coquereli
ENSXETG00000011622	raver1	94	56.633	ENSPVAG00000003689	RAVER1	100	55.703	Pteropus_vampyrus
ENSXETG00000011622	raver1	94	50.677	ENSPNYG00000013284	raver1	90	51.493	Pundamilia_nyererei
ENSXETG00000011622	raver1	96	52.699	ENSPNAG00000015476	raver1	93	52.174	Pygocentrus_nattereri
ENSXETG00000011622	raver1	89	66.667	ENSRNOG00000020710	Raver1	98	55.034	Rattus_norvegicus
ENSXETG00000011622	raver1	100	56.834	ENSRBIG00000034702	RAVER1	98	57.375	Rhinopithecus_bieti
ENSXETG00000011622	raver1	100	56.969	ENSRROG00000031186	RAVER1	98	57.510	Rhinopithecus_roxellana
ENSXETG00000011622	raver1	100	55.108	ENSSBOG00000023423	RAVER1	98	56.359	Saimiri_boliviensis_boliviensis
ENSXETG00000011622	raver1	89	60.061	ENSSHAG00000008181	-	90	60.061	Sarcophilus_harrisii
ENSXETG00000011622	raver1	94	50.882	ENSSMAG00000004546	raver1	94	50.140	Scophthalmus_maximus
ENSXETG00000011622	raver1	94	50.367	ENSSDUG00000021063	raver1	90	52.624	Seriola_dumerili
ENSXETG00000011622	raver1	94	50.367	ENSSLDG00000014505	raver1	90	52.624	Seriola_lalandi_dorsalis
ENSXETG00000011622	raver1	94	50.515	ENSSPAG00000000688	raver1	100	49.671	Stegastes_partitus
ENSXETG00000011622	raver1	100	55.436	ENSSSCG00000013650	-	100	55.973	Sus_scrofa
ENSXETG00000011622	raver1	96	50.704	ENSTRUG00000025641	raver1	92	50.704	Takifugu_rubripes
ENSXETG00000011622	raver1	100	54.222	ENSTTRG00000009552	RAVER1	100	55.673	Tursiops_truncatus
ENSXETG00000011622	raver1	100	54.368	ENSUAMG00000020385	RAVER1	98	55.817	Ursus_americanus
ENSXETG00000011622	raver1	100	55.080	ENSVVUG00000028976	RAVER1	98	56.568	Vulpes_vulpes
ENSXETG00000011622	raver1	100	46.976	ENSXCOG00000016368	raver1	90	50.644	Xiphophorus_couchianus
ENSXETG00000011622	raver1	94	50.644	ENSXMAG00000000217	raver1	90	50.644	Xiphophorus_maculatus