EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000011707 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 20994 bases
Position: chrGL172722.1:2945306-2966299
Accession: XB-GENE-1001484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060806	CPL	PF08144.11	9.5e-40	1	1
ENSXETP00000025600	CPL	PF08144.11	5.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000025600	-	1935	-	ENSXETP00000025600	644 (aa)	-	F7CYG7
ENSXETT00000063782	-	1917	-	ENSXETP00000060806	639 (aa)	-	F6TPC8

Gene Model

Click here to download ENSXETG00000011707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011707	pum3	99	58.725	ENSG00000080608	PUM3	99	58.716	Homo_sapiens
ENSXETG00000011707	pum3	92	49.007	ENSAPOG00000020252	pum3	95	47.403	Acanthochromis_polyacanthus
ENSXETG00000011707	pum3	96	60.635	ENSAMEG00000012187	PUM3	99	59.447	Ailuropoda_melanoleuca
ENSXETG00000011707	pum3	89	46.760	ENSACIG00000009786	pum3	88	47.628	Amphilophus_citrinellus
ENSXETG00000011707	pum3	92	49.172	ENSAOCG00000004439	pum3	95	47.565	Amphiprion_ocellaris
ENSXETG00000011707	pum3	92	49.172	ENSAPEG00000020523	pum3	95	47.565	Amphiprion_percula
ENSXETG00000011707	pum3	88	49.050	ENSATEG00000005799	pum3	82	51.136	Anabas_testudineus
ENSXETG00000011707	pum3	95	60.161	ENSAPLG00000002920	PUM3	99	60.484	Anas_platyrhynchos
ENSXETG00000011707	pum3	93	58.500	ENSACAG00000003174	PUM3	99	58.333	Anolis_carolinensis
ENSXETG00000011707	pum3	99	59.265	ENSANAG00000024520	PUM3	100	58.447	Aotus_nancymaae
ENSXETG00000011707	pum3	97	47.068	ENSACLG00000001017	pum3	81	50.758	Astatotilapia_calliptera
ENSXETG00000011707	pum3	98	54.803	ENSAMXG00000020911	pum3	97	55.357	Astyanax_mexicanus
ENSXETG00000011707	pum3	98	59.657	ENSBTAG00000013357	PUM3	99	59.908	Bos_taurus
ENSXETG00000011707	pum3	76	30.645	WBGene00014165	puf-12	64	30.645	Caenorhabditis_elegans
ENSXETG00000011707	pum3	99	59.140	ENSCJAG00000010917	PUM3	99	59.140	Callithrix_jacchus
ENSXETG00000011707	pum3	96	60.635	ENSCAFG00000002035	PUM3	96	60.635	Canis_familiaris
ENSXETG00000011707	pum3	96	60.635	ENSCAFG00020026867	PUM3	96	60.635	Canis_lupus_dingo
ENSXETG00000011707	pum3	97	60.443	ENSCHIG00000021559	PUM3	99	59.754	Capra_hircus
ENSXETG00000011707	pum3	99	58.525	ENSTSYG00000007481	PUM3	100	57.710	Carlito_syrichta
ENSXETG00000011707	pum3	99	57.879	ENSCAPG00000010592	-	99	57.562	Cavia_aperea
ENSXETG00000011707	pum3	99	57.960	ENSCPOG00000008552	-	99	57.960	Cavia_porcellus
ENSXETG00000011707	pum3	99	59.447	ENSCCAG00000032650	PUM3	99	59.447	Cebus_capucinus
ENSXETG00000011707	pum3	99	59.418	ENSCATG00000024880	PUM3	100	58.600	Cercocebus_atys
ENSXETG00000011707	pum3	99	58.806	ENSCLAG00000011892	PUM3	99	58.806	Chinchilla_lanigera
ENSXETG00000011707	pum3	99	59.112	ENSCSAG00000008691	PUM3	100	58.295	Chlorocebus_sabaeus
ENSXETG00000011707	pum3	97	44.216	ENSCHOG00000002535	PUM3	95	43.846	Choloepus_hoffmanni
ENSXETG00000011707	pum3	99	60.372	ENSCPBG00000025470	PUM3	95	60.000	Chrysemys_picta_bellii
ENSXETG00000011707	pum3	68	41.794	ENSCING00000024199	-	74	42.823	Ciona_intestinalis
ENSXETG00000011707	pum3	83	37.132	ENSCSAVG00000006072	-	99	37.121	Ciona_savignyi
ENSXETG00000011707	pum3	99	59.571	ENSCANG00000006142	PUM3	99	59.571	Colobus_angolensis_palliatus
ENSXETG00000011707	pum3	99	58.384	ENSCGRG00001016402	Pum3	96	59.968	Cricetulus_griseus_chok1gshd
ENSXETG00000011707	pum3	99	58.384	ENSCGRG00000010207	Pum3	96	59.968	Cricetulus_griseus_crigri
ENSXETG00000011707	pum3	78	53.502	ENSCSEG00000001565	pum3	95	50.912	Cynoglossus_semilaevis
ENSXETG00000011707	pum3	63	35.793	ENSCVAG00000006550	pum3	61	35.793	Cyprinodon_variegatus
ENSXETG00000011707	pum3	98	53.701	ENSDARG00000087779	pum3	97	54.267	Danio_rerio
ENSXETG00000011707	pum3	99	50.462	ENSDNOG00000008157	PUM3	70	50.077	Dasypus_novemcinctus
ENSXETG00000011707	pum3	85	60.806	ENSETEG00000015331	PUM3	83	60.335	Echinops_telfairi
ENSXETG00000011707	pum3	74	38.272	ENSEBUG00000011586	pum3	77	37.645	Eptatretus_burgeri
ENSXETG00000011707	pum3	96	60.828	ENSEASG00005010350	PUM3	99	59.784	Equus_asinus_asinus
ENSXETG00000011707	pum3	96	60.828	ENSECAG00000017193	PUM3	99	59.784	Equus_caballus
ENSXETG00000011707	pum3	81	58.302	ENSEEUG00000010314	PUM3	92	55.872	Erinaceus_europaeus
ENSXETG00000011707	pum3	97	53.025	ENSELUG00000002215	pum3	94	53.682	Esox_lucius
ENSXETG00000011707	pum3	97	62.319	ENSFALG00000010509	PUM3	96	62.319	Ficedula_albicollis
ENSXETG00000011707	pum3	99	58.040	ENSFDAG00000021027	PUM3	99	58.040	Fukomys_damarensis
ENSXETG00000011707	pum3	87	47.781	ENSFHEG00000015576	pum3	94	47.781	Fundulus_heteroclitus
ENSXETG00000011707	pum3	83	52.328	ENSGMOG00000014217	pum3	97	52.099	Gadus_morhua
ENSXETG00000011707	pum3	97	60.160	ENSGALG00000010178	PUM3	97	59.282	Gallus_gallus
ENSXETG00000011707	pum3	63	45.215	ENSGAFG00000001930	pum3	70	45.215	Gambusia_affinis
ENSXETG00000011707	pum3	83	49.907	ENSGACG00000017878	pum3	97	49.905	Gasterosteus_aculeatus
ENSXETG00000011707	pum3	98	60.563	ENSGAGG00000018983	PUM3	99	60.835	Gopherus_agassizii
ENSXETG00000011707	pum3	99	58.959	ENSGGOG00000006143	PUM3	100	58.295	Gorilla_gorilla
ENSXETG00000011707	pum3	99	41.186	ENSHBUG00000012903	pum3	95	42.667	Haplochromis_burtoni
ENSXETG00000011707	pum3	99	59.049	ENSHGLG00000015868	-	99	59.049	Heterocephalus_glaber_female
ENSXETG00000011707	pum3	99	59.049	ENSHGLG00100018825	PUM3	99	59.049	Heterocephalus_glaber_male
ENSXETG00000011707	pum3	94	48.264	ENSHCOG00000010306	pum3	92	47.106	Hippocampus_comes
ENSXETG00000011707	pum3	87	55.830	ENSIPUG00000024801	pum3	97	53.647	Ictalurus_punctatus
ENSXETG00000011707	pum3	99	60.123	ENSSTOG00000009586	PUM3	99	60.123	Ictidomys_tridecemlineatus
ENSXETG00000011707	pum3	99	57.627	ENSJJAG00000012563	Pum3	99	57.627	Jaculus_jaculus
ENSXETG00000011707	pum3	92	47.059	ENSKMAG00000010277	pum3	98	46.667	Kryptolebias_marmoratus
ENSXETG00000011707	pum3	91	46.952	ENSLBEG00000012213	pum3	95	45.353	Labrus_bergylta
ENSXETG00000011707	pum3	96	56.619	ENSLACG00000008312	PUM3	97	57.416	Latimeria_chalumnae
ENSXETG00000011707	pum3	98	57.595	ENSLOCG00000012529	pum3	98	57.810	Lepisosteus_oculatus
ENSXETG00000011707	pum3	97	59.055	ENSLAFG00000017341	PUM3	99	58.652	Loxodonta_africana
ENSXETG00000011707	pum3	99	59.265	ENSMFAG00000001430	PUM3	100	58.447	Macaca_fascicularis
ENSXETG00000011707	pum3	99	59.265	ENSMMUG00000002362	PUM3	99	58.447	Macaca_mulatta
ENSXETG00000011707	pum3	99	59.265	ENSMNEG00000035288	PUM3	100	58.447	Macaca_nemestrina
ENSXETG00000011707	pum3	99	59.571	ENSMLEG00000034820	PUM3	99	59.571	Mandrillus_leucophaeus
ENSXETG00000011707	pum3	83	52.523	ENSMAMG00000022861	pum3	81	52.372	Mastacembelus_armatus
ENSXETG00000011707	pum3	94	48.000	ENSMZEG00005014205	pum3	97	46.914	Maylandia_zebra
ENSXETG00000011707	pum3	99	54.780	ENSMGAG00000002255	PUM3	98	54.641	Meleagris_gallopavo
ENSXETG00000011707	pum3	99	59.299	ENSMAUG00000009733	Pum3	92	62.748	Mesocricetus_auratus
ENSXETG00000011707	pum3	99	59.140	ENSMICG00000045916	PUM3	87	59.140	Microcebus_murinus
ENSXETG00000011707	pum3	97	57.771	ENSMOCG00000014830	-	98	56.940	Microtus_ochrogaster
ENSXETG00000011707	pum3	96	60.476	ENSMOCG00000019519	-	99	59.140	Microtus_ochrogaster
ENSXETG00000011707	pum3	94	47.557	ENSMMOG00000012184	pum3	98	46.656	Mola_mola
ENSXETG00000011707	pum3	99	55.061	ENSMODG00000015417	PUM3	84	57.610	Monodelphis_domestica
ENSXETG00000011707	pum3	83	50.373	ENSMALG00000022164	pum3	90	47.769	Monopterus_albus
ENSXETG00000011707	pum3	96	60.476	MGP_CAROLIEiJ_G0022845	Pum3	96	60.476	Mus_caroli
ENSXETG00000011707	pum3	96	60.159	ENSMUSG00000041360	Pum3	99	58.986	Mus_musculus
ENSXETG00000011707	pum3	96	60.476	MGP_PahariEiJ_G0014338	Pum3	96	60.476	Mus_pahari
ENSXETG00000011707	pum3	96	59.841	MGP_SPRETEiJ_G0023763	Pum3	99	58.679	Mus_spretus
ENSXETG00000011707	pum3	96	59.809	ENSMPUG00000005125	PUM3	99	58.552	Mustela_putorius_furo
ENSXETG00000011707	pum3	99	57.627	ENSMLUG00000002309	PUM3	99	57.627	Myotis_lucifugus
ENSXETG00000011707	pum3	99	56.068	ENSNGAG00000019468	Pum3	99	55.914	Nannospalax_galili
ENSXETG00000011707	pum3	94	44.408	ENSNBRG00000021370	pum3	79	48.413	Neolamprologus_brichardi
ENSXETG00000011707	pum3	99	59.112	ENSNLEG00000008712	PUM3	100	58.447	Nomascus_leucogenys
ENSXETG00000011707	pum3	70	49.333	ENSMEUG00000013606	-	92	49.333	Notamacropus_eugenii
ENSXETG00000011707	pum3	63	61.650	ENSOPRG00000004225	-	72	56.660	Ochotona_princeps
ENSXETG00000011707	pum3	99	58.679	ENSODEG00000003625	-	99	58.679	Octodon_degus
ENSXETG00000011707	pum3	99	55.505	ENSODEG00000016477	-	99	55.505	Octodon_degus
ENSXETG00000011707	pum3	97	46.154	ENSONIG00000012733	pum3	81	50.000	Oreochromis_niloticus
ENSXETG00000011707	pum3	85	60.073	ENSOANG00000014995	PUM3	98	59.963	Ornithorhynchus_anatinus
ENSXETG00000011707	pum3	99	58.578	ENSOCUG00000026104	-	99	58.578	Oryctolagus_cuniculus
ENSXETG00000011707	pum3	99	58.860	ENSOCUG00000004189	-	99	58.860	Oryctolagus_cuniculus
ENSXETG00000011707	pum3	92	46.053	ENSORLG00000014935	pum3	96	45.197	Oryzias_latipes
ENSXETG00000011707	pum3	94	45.875	ENSORLG00020002841	pum3	82	48.864	Oryzias_latipes_hni
ENSXETG00000011707	pum3	96	45.584	ENSORLG00015015906	pum3	93	50.000	Oryzias_latipes_hsok
ENSXETG00000011707	pum3	91	46.013	ENSOMEG00000009427	pum3	98	45.039	Oryzias_melastigma
ENSXETG00000011707	pum3	99	59.112	ENSOGAG00000008125	-	99	59.112	Otolemur_garnettii
ENSXETG00000011707	pum3	99	44.749	ENSOGAG00000033481	-	96	45.614	Otolemur_garnettii
ENSXETG00000011707	pum3	97	60.410	ENSOARG00000013337	PUM3	99	59.571	Ovis_aries
ENSXETG00000011707	pum3	99	58.877	ENSPPAG00000041337	PUM3	99	58.869	Pan_paniscus
ENSXETG00000011707	pum3	99	57.757	ENSPPRG00000000809	PUM3	99	57.757	Panthera_pardus
ENSXETG00000011707	pum3	99	57.911	ENSPTIG00000021934	PUM3	99	57.911	Panthera_tigris_altaica
ENSXETG00000011707	pum3	99	59.029	ENSPTRG00000020735	PUM3	99	59.021	Pan_troglodytes
ENSXETG00000011707	pum3	99	59.418	ENSPANG00000025118	PUM3	100	58.600	Papio_anubis
ENSXETG00000011707	pum3	98	55.901	ENSPKIG00000022249	pum3	99	56.444	Paramormyrops_kingsleyae
ENSXETG00000011707	pum3	99	61.146	ENSPSIG00000016272	PUM3	100	60.775	Pelodiscus_sinensis
ENSXETG00000011707	pum3	75	52.697	ENSPMGG00000021261	pum3	96	52.697	Periophthalmus_magnuspinnatus
ENSXETG00000011707	pum3	97	48.576	ENSPEMG00000019340	-	96	48.576	Peromyscus_maniculatus_bairdii
ENSXETG00000011707	pum3	90	58.895	ENSPCIG00000030598	PUM3	77	58.895	Phascolarctos_cinereus
ENSXETG00000011707	pum3	92	47.899	ENSPFOG00000001719	pum3	87	50.760	Poecilia_formosa
ENSXETG00000011707	pum3	98	45.755	ENSPLAG00000020010	pum3	94	47.002	Poecilia_latipinna
ENSXETG00000011707	pum3	98	45.891	ENSPMEG00000017451	pum3	83	50.664	Poecilia_mexicana
ENSXETG00000011707	pum3	99	59.265	ENSPPYG00000019255	PUM3	99	59.265	Pongo_abelii
ENSXETG00000011707	pum3	97	53.155	ENSPCAG00000005797	PUM3	92	53.155	Procavia_capensis
ENSXETG00000011707	pum3	99	59.293	ENSPCOG00000027325	PUM3	99	59.476	Propithecus_coquereli
ENSXETG00000011707	pum3	99	58.372	ENSPVAG00000016135	PUM3	95	58.372	Pteropus_vampyrus
ENSXETG00000011707	pum3	99	45.991	ENSPNYG00000016124	pum3	82	50.758	Pundamilia_nyererei
ENSXETG00000011707	pum3	98	51.730	ENSPNAG00000026524	pum3	97	52.350	Pygocentrus_nattereri
ENSXETG00000011707	pum3	99	58.679	ENSRNOG00000048356	RGD1308750	99	58.679	Rattus_norvegicus
ENSXETG00000011707	pum3	99	58.525	ENSRNOG00000012574	Pum3	99	58.525	Rattus_norvegicus
ENSXETG00000011707	pum3	99	59.724	ENSRBIG00000036924	PUM3	99	59.571	Rhinopithecus_bieti
ENSXETG00000011707	pum3	99	59.724	ENSRROG00000041089	PUM3	99	59.724	Rhinopithecus_roxellana
ENSXETG00000011707	pum3	99	59.908	ENSSBOG00000028066	PUM3	99	59.908	Saimiri_boliviensis_boliviensis
ENSXETG00000011707	pum3	99	55.399	ENSSHAG00000003730	PUM3	100	54.573	Sarcophilus_harrisii
ENSXETG00000011707	pum3	95	54.976	ENSSFOG00015018778	pum3	99	53.355	Scleropages_formosus
ENSXETG00000011707	pum3	83	51.782	ENSSMAG00000013236	pum3	95	47.812	Scophthalmus_maximus
ENSXETG00000011707	pum3	91	49.010	ENSSDUG00000001887	pum3	93	47.343	Seriola_dumerili
ENSXETG00000011707	pum3	91	49.010	ENSSLDG00000015766	pum3	94	47.182	Seriola_lalandi_dorsalis
ENSXETG00000011707	pum3	95	56.431	ENSSARG00000000579	PUM3	99	56.431	Sorex_araneus
ENSXETG00000011707	pum3	96	59.612	ENSSPUG00000001707	PUM3	99	58.320	Sphenodon_punctatus
ENSXETG00000011707	pum3	92	49.088	ENSSPAG00000003976	pum3	95	48.065	Stegastes_partitus
ENSXETG00000011707	pum3	96	59.713	ENSSSCG00000005227	PUM3	99	63.553	Sus_scrofa
ENSXETG00000011707	pum3	99	60.555	ENSTGUG00000005339	PUM3	99	60.597	Taeniopygia_guttata
ENSXETG00000011707	pum3	99	47.289	ENSTRUG00000004074	pum3	79	51.515	Takifugu_rubripes
ENSXETG00000011707	pum3	93	49.423	ENSTNIG00000010325	pum3	97	50.248	Tetraodon_nigroviridis
ENSXETG00000011707	pum3	86	46.679	ENSTBEG00000013058	PUM3	86	46.679	Tupaia_belangeri
ENSXETG00000011707	pum3	95	53.933	ENSTTRG00000001062	PUM3	96	52.842	Tursiops_truncatus
ENSXETG00000011707	pum3	96	53.492	ENSUMAG00000018443	PUM3	99	57.685	Ursus_maritimus
ENSXETG00000011707	pum3	99	59.215	ENSVPAG00000010766	PUM3	99	59.237	Vicugna_pacos
ENSXETG00000011707	pum3	96	60.794	ENSVVUG00000006527	PUM3	96	60.794	Vulpes_vulpes
ENSXETG00000011707	pum3	92	45.033	ENSXCOG00000006725	pum3	98	44.706	Xiphophorus_couchianus
ENSXETG00000011707	pum3	98	45.342	ENSXMAG00000002926	pum3	94	45.469	Xiphophorus_maculatus