EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000011767 (Gene tree)
Gene ID: -
Gene Symbol: ddx43
Alias: -
Full Name: Xenopus tropicalis DEAD-box helicase 43 (ddx43)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 55908 bases
Position: chrGL172829.1:1603278-1659185
Accession: NM_001079005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000025746	KH_1	PF00013.29	2.6e-15	1	1
ENSXETP00000025746	ResIII	PF04851.15	5.6e-06	1	1
ENSXETP00000025746	DEAD	PF00270.29	3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000025746	-	2982	-	ENSXETP00000025746	666 (aa)	-	Q0P4V5

Gene Model

Click here to download ENSXETG00000011767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011767's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000011767	ddx43	59	31.808	ENSXETG00000006258	ddx31	68	31.808
ENSXETG00000011767	ddx43	57	41.304	ENSXETG00000009807	ddx23	51	41.304
ENSXETG00000011767	ddx43	54	32.967	ENSXETG00000020123	eif4a1	87	32.967
ENSXETG00000011767	ddx43	65	44.898	ENSXETG00000006900	ddx17	70	44.898
ENSXETG00000011767	ddx43	50	36.047	ENSXETG00000010135	ddx49	70	36.047
ENSXETG00000011767	ddx43	66	33.784	ENSXETG00000000311	ddx59	72	33.784
ENSXETG00000011767	ddx43	56	31.592	ENSXETG00000005435	ddx28	78	31.592
ENSXETG00000011767	ddx43	58	38.579	ENSXETG00000033518	DDX41	63	38.579
ENSXETG00000011767	ddx43	56	41.837	ENSXETG00000015477	ddx3x	56	41.837
ENSXETG00000011767	ddx43	55	31.892	ENSXETG00000019390	eif4a2	89	32.703
ENSXETG00000011767	ddx43	61	30.465	ENSXETG00000025903	ddx52	70	30.465
ENSXETG00000011767	ddx43	65	43.864	ENSXETG00000012580	ddx5	72	43.498
ENSXETG00000011767	ddx43	52	33.524	ENSXETG00000010061	ddx6	70	34.000
ENSXETG00000011767	ddx43	52	34.648	ENSXETG00000014458	ddx10	51	34.648
ENSXETG00000011767	ddx43	52	33.242	ENSXETG00000008836	ddx21	52	30.193
ENSXETG00000011767	ddx43	58	39.750	ENSXETG00000030832	DDX4	63	39.552
ENSXETG00000011767	ddx43	51	39.359	ENSXETG00000022984	ddx47	75	39.359
ENSXETG00000011767	ddx43	51	30.199	ENSXETG00000028097	ddx19b	75	30.199
ENSXETG00000011767	ddx43	55	32.973	ENSXETG00000013720	eif4a3	87	32.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011767	ddx43	98	58.321	ENSAPOG00000001712	ddx43	93	58.321	Acanthochromis_polyacanthus
ENSXETG00000011767	ddx43	98	52.424	ENSACIG00000012170	ddx43	96	52.006	Amphilophus_citrinellus
ENSXETG00000011767	ddx43	98	60.296	ENSAOCG00000001331	ddx43	92	60.207	Amphiprion_ocellaris
ENSXETG00000011767	ddx43	98	60.961	ENSAPEG00000001133	ddx43	91	60.961	Amphiprion_percula
ENSXETG00000011767	ddx43	98	60.909	ENSATEG00000012664	ddx43	95	60.909	Anabas_testudineus
ENSXETG00000011767	ddx43	82	72.890	ENSAPLG00000010182	-	98	79.574	Anas_platyrhynchos
ENSXETG00000011767	ddx43	87	71.477	ENSACAG00000004387	-	99	65.634	Anolis_carolinensis
ENSXETG00000011767	ddx43	98	60.207	ENSACLG00000026081	ddx43	98	59.652	Astatotilapia_calliptera
ENSXETG00000011767	ddx43	99	59.682	ENSAMXG00000004457	ddx43	93	59.798	Astyanax_mexicanus
ENSXETG00000011767	ddx43	69	48.077	WBGene00013214	Y54G11A.3	92	48.077	Caenorhabditis_elegans
ENSXETG00000011767	ddx43	56	49.738	ENSCSEG00000000532	ddx43	93	50.000	Cynoglossus_semilaevis
ENSXETG00000011767	ddx43	90	53.289	ENSCVAG00000009980	ddx43	93	53.289	Cyprinodon_variegatus
ENSXETG00000011767	ddx43	98	59.384	ENSDARG00000022614	ddx43	94	59.307	Danio_rerio
ENSXETG00000011767	ddx43	95	46.526	FBgn0037549	CG7878	93	46.526	Drosophila_melanogaster
ENSXETG00000011767	ddx43	60	48.988	ENSETEG00000019547	-	71	48.031	Echinops_telfairi
ENSXETG00000011767	ddx43	75	47.222	ENSETEG00000014626	-	96	46.771	Echinops_telfairi
ENSXETG00000011767	ddx43	98	61.329	ENSELUG00000012126	ddx43	95	61.538	Esox_lucius
ENSXETG00000011767	ddx43	88	72.128	ENSFALG00000007042	-	98	67.221	Ficedula_albicollis
ENSXETG00000011767	ddx43	74	66.992	ENSFHEG00000011226	ddx43	93	66.860	Fundulus_heteroclitus
ENSXETG00000011767	ddx43	68	66.087	ENSGMOG00000004178	ddx43	100	66.087	Gadus_morhua
ENSXETG00000011767	ddx43	65	78.886	ENSGALG00000015928	-	98	78.886	Gallus_gallus
ENSXETG00000011767	ddx43	98	57.391	ENSGAFG00000012622	ddx43	97	56.919	Gambusia_affinis
ENSXETG00000011767	ddx43	83	64.654	ENSGACG00000012072	ddx43	98	64.499	Gasterosteus_aculeatus
ENSXETG00000011767	ddx43	100	62.737	ENSGAGG00000025230	-	100	62.737	Gopherus_agassizii
ENSXETG00000011767	ddx43	98	59.172	ENSHBUG00000011653	ddx43	98	59.216	Haplochromis_burtoni
ENSXETG00000011767	ddx43	98	57.057	ENSHCOG00000014704	ddx43	95	57.143	Hippocampus_comes
ENSXETG00000011767	ddx43	99	60.088	ENSIPUG00000023423	ddx43	97	61.391	Ictalurus_punctatus
ENSXETG00000011767	ddx43	98	59.292	ENSKMAG00000016167	ddx43	96	58.986	Kryptolebias_marmoratus
ENSXETG00000011767	ddx43	98	58.955	ENSLBEG00000007913	ddx43	95	59.431	Labrus_bergylta
ENSXETG00000011767	ddx43	70	73.292	ENSLACG00000000741	ddx43	99	73.292	Latimeria_chalumnae
ENSXETG00000011767	ddx43	98	63.118	ENSLOCG00000016170	ddx43	98	62.463	Lepisosteus_oculatus
ENSXETG00000011767	ddx43	98	55.917	ENSMAMG00000022128	ddx43	97	55.718	Mastacembelus_armatus
ENSXETG00000011767	ddx43	98	60.207	ENSMZEG00005027349	ddx43	98	59.652	Maylandia_zebra
ENSXETG00000011767	ddx43	85	70.877	ENSMGAG00000013832	-	99	70.877	Meleagris_gallopavo
ENSXETG00000011767	ddx43	98	58.886	ENSMMOG00000007346	ddx43	95	59.036	Mola_mola
ENSXETG00000011767	ddx43	90	64.975	ENSMODG00000018546	-	100	61.037	Monodelphis_domestica
ENSXETG00000011767	ddx43	88	58.974	ENSMODG00000014335	-	99	58.974	Monodelphis_domestica
ENSXETG00000011767	ddx43	98	57.375	ENSMALG00000020673	ddx43	96	57.122	Monopterus_albus
ENSXETG00000011767	ddx43	98	60.570	ENSNBRG00000010942	ddx43	97	60.000	Neolamprologus_brichardi
ENSXETG00000011767	ddx43	98	62.232	ENSONIG00000001195	ddx43	99	61.619	Oreochromis_niloticus
ENSXETG00000011767	ddx43	55	69.355	ENSOANG00000006467	-	100	67.885	Ornithorhynchus_anatinus
ENSXETG00000011767	ddx43	87	63.591	ENSORLG00000002267	ddx43	91	63.591	Oryzias_latipes
ENSXETG00000011767	ddx43	87	63.591	ENSORLG00020018592	ddx43	91	63.591	Oryzias_latipes_hni
ENSXETG00000011767	ddx43	87	63.423	ENSORLG00015004854	ddx43	90	63.423	Oryzias_latipes_hsok
ENSXETG00000011767	ddx43	90	63.607	ENSOMEG00000023418	ddx43	95	63.607	Oryzias_melastigma
ENSXETG00000011767	ddx43	98	58.952	ENSPKIG00000002941	ddx43	95	58.671	Paramormyrops_kingsleyae
ENSXETG00000011767	ddx43	87	72.128	ENSPSIG00000002202	-	94	72.128	Pelodiscus_sinensis
ENSXETG00000011767	ddx43	55	49.870	ENSPMGG00000019854	ddx43	91	50.513	Periophthalmus_magnuspinnatus
ENSXETG00000011767	ddx43	66	74.830	ENSPCIG00000017981	-	99	74.830	Phascolarctos_cinereus
ENSXETG00000011767	ddx43	91	54.902	ENSPCIG00000002492	-	98	54.902	Phascolarctos_cinereus
ENSXETG00000011767	ddx43	84	63.683	ENSPFOG00000004241	ddx43	97	56.304	Poecilia_formosa
ENSXETG00000011767	ddx43	84	63.855	ENSPLAG00000023362	ddx43	88	61.588	Poecilia_latipinna
ENSXETG00000011767	ddx43	98	56.414	ENSPMEG00000004870	ddx43	97	55.874	Poecilia_mexicana
ENSXETG00000011767	ddx43	98	54.123	ENSPREG00000000923	ddx43	97	54.252	Poecilia_reticulata
ENSXETG00000011767	ddx43	98	57.594	ENSPNYG00000009064	ddx43	97	57.080	Pundamilia_nyererei
ENSXETG00000011767	ddx43	99	60.619	ENSPNAG00000001232	ddx43	94	60.588	Pygocentrus_nattereri
ENSXETG00000011767	ddx43	84	62.367	ENSSHAG00000016933	-	98	62.367	Sarcophilus_harrisii
ENSXETG00000011767	ddx43	88	65.320	ENSSHAG00000001847	-	96	64.412	Sarcophilus_harrisii
ENSXETG00000011767	ddx43	84	63.428	ENSSFOG00015012193	ddx43	88	63.428	Scleropages_formosus
ENSXETG00000011767	ddx43	98	58.250	ENSSMAG00000019288	ddx43	95	59.045	Scophthalmus_maximus
ENSXETG00000011767	ddx43	98	59.941	ENSSDUG00000020120	ddx43	94	60.741	Seriola_dumerili
ENSXETG00000011767	ddx43	98	59.670	ENSSLDG00000017225	ddx43	93	59.910	Seriola_lalandi_dorsalis
ENSXETG00000011767	ddx43	72	68.815	ENSSPUG00000018097	-	98	68.815	Sphenodon_punctatus
ENSXETG00000011767	ddx43	98	61.237	ENSSPAG00000006858	ddx43	96	61.185	Stegastes_partitus
ENSXETG00000011767	ddx43	85	71.848	ENSTGUG00000012684	-	96	71.848	Taeniopygia_guttata
ENSXETG00000011767	ddx43	97	52.897	ENSTRUG00000012795	ddx43	99	52.086	Takifugu_rubripes
ENSXETG00000011767	ddx43	84	61.121	ENSTNIG00000009822	ddx43	97	60.870	Tetraodon_nigroviridis
ENSXETG00000011767	ddx43	98	56.561	ENSXCOG00000013810	ddx43	96	56.315	Xiphophorus_couchianus
ENSXETG00000011767	ddx43	97	58.971	ENSXMAG00000017126	ddx43	96	58.971	Xiphophorus_maculatus