EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000011794 (Gene tree)
Gene ID: -
Gene Symbol: pan3
Alias: -
Full Name: Xenopus tropicalis poly(A) specific ribonuclease subunit PAN3 (pan3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 37272 bases
Position: chrGL172716.1:2744127-2781398
Accession: NM_001017301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000025796	zf-CCCH	PF00642.24	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000025796	-	5145	XM_012957062	ENSXETP00000025796	787 (aa)	XP_012812516	A1L1C7

Gene Model

Click here to download ENSXETG00000011794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000011794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000011794	pan3	99	72.840	ENSELUG00000014375	pan3	97	73.791	Esox_lucius
ENSXETG00000011794	pan3	100	76.658	ENSKMAG00000008813	pan3	100	77.475	Kryptolebias_marmoratus
ENSXETG00000011794	pan3	100	74.323	ENSLACG00000017156	PAN3	91	86.942	Latimeria_chalumnae
ENSXETG00000011794	pan3	100	76.580	ENSORLG00000008758	pan3	100	76.332	Oryzias_latipes
ENSXETG00000011794	pan3	100	74.500	ENSORLG00015014393	pan3	100	74.250	Oryzias_latipes_hsok
ENSXETG00000011794	pan3	100	73.292	ENSOMEG00000007798	pan3	100	73.043	Oryzias_melastigma
ENSXETG00000011794	pan3	72	69.231	ENSPKIG00000008329	-	96	68.581	Paramormyrops_kingsleyae
ENSXETG00000011794	pan3	97	67.662	ENSPMAG00000002383	pan3	100	67.490	Petromyzon_marinus
ENSXETG00000011794	pan3	100	76.700	ENSPREG00000019582	pan3	100	76.196	Poecilia_reticulata
ENSXETG00000011794	pan3	100	76.933	ENSSMAG00000014517	pan3	96	77.876	Scophthalmus_maximus