EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXETG00000012164 (Gene tree)
Gene ID
-
Gene Symbol
hdlbp
Alias
-
Full Name
Xenopus tropicalis high density lipoprotein binding protein (vigilin) (hdlbp)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Minus strand
Length
25987 bases
Position
chrGL172691.1:3573759-3599745
Accession
NM_001006853
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000026545KH_1PF00013.291.3e-183114
ENSXETP00000026545KH_1PF00013.291.3e-183214
ENSXETP00000026545KH_1PF00013.291.3e-183314
ENSXETP00000026545KH_1PF00013.291.3e-183414
ENSXETP00000026545KH_1PF00013.291.3e-183514
ENSXETP00000026545KH_1PF00013.291.3e-183614
ENSXETP00000026545KH_1PF00013.291.3e-183714
ENSXETP00000026545KH_1PF00013.291.3e-183814
ENSXETP00000026545KH_1PF00013.291.3e-183914
ENSXETP00000026545KH_1PF00013.291.3e-1831014
ENSXETP00000026545KH_1PF00013.291.3e-1831114
ENSXETP00000026545KH_1PF00013.291.3e-1831214
ENSXETP00000026545KH_1PF00013.291.3e-1831314
ENSXETP00000026545KH_1PF00013.291.3e-1831414
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000026545-5149-ENSXETP000000265451285 (aa)-F6U0X4
Gene Model
Click here to download ENSXETG00000012164's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000012164's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000012164hdlbp9983.216ENSG00000115677HDLBP9687.645Homo_sapiens
ENSXETG00000012164hdlbp9978.431ENSAPOG00000012609hdlbpa9978.918Acanthochromis_polyacanthus
ENSXETG00000012164hdlbp9983.216ENSAMEG00000016552HDLBP10083.216Ailuropoda_melanoleuca
ENSXETG00000012164hdlbp9975.972ENSACIG00000006015hdlbpa9975.972Amphilophus_citrinellus
ENSXETG00000012164hdlbp9978.431ENSAOCG00000000300hdlbpa9978.918Amphiprion_ocellaris
ENSXETG00000012164hdlbp9978.431ENSAPEG00000000522hdlbpa9979.816Amphiprion_percula
ENSXETG00000012164hdlbp9978.292ENSATEG00000009748hdlbpa9978.292Anabas_testudineus
ENSXETG00000012164hdlbp9983.359ENSACAG00000001556HDLBP10083.359Anolis_carolinensis
ENSXETG00000012164hdlbp9983.137ENSANAG00000020545HDLBP10083.137Aotus_nancymaae
ENSXETG00000012164hdlbp9978.135ENSACLG00000025965hdlbpa9978.292Astatotilapia_calliptera
ENSXETG00000012164hdlbp9279.628ENSAMXG00000004221hdlbpa9979.628Astyanax_mexicanus
ENSXETG00000012164hdlbp9983.097ENSBTAG00000004315HDLBP10082.431Bos_taurus
ENSXETG00000012164hdlbp9982.694ENSCJAG00000006152HDLBP10082.694Callithrix_jacchus
ENSXETG00000012164hdlbp9983.608ENSCAFG00000012913HDLBP10084.420Canis_familiaris
ENSXETG00000012164hdlbp9983.608ENSCAFG00020025089HDLBP10083.608Canis_lupus_dingo
ENSXETG00000012164hdlbp9982.353ENSCHIG00000022364HDLBP10082.353Capra_hircus
ENSXETG00000012164hdlbp9983.373ENSTSYG00000002379HDLBP10083.373Carlito_syrichta
ENSXETG00000012164hdlbp9980.016ENSCAPG00000008584HDLBP10080.016Cavia_aperea
ENSXETG00000012164hdlbp9983.176ENSCPOG00000006297HDLBP10083.176Cavia_porcellus
ENSXETG00000012164hdlbp9983.137ENSCCAG00000023361-10083.137Cebus_capucinus
ENSXETG00000012164hdlbp9059.481ENSCCAG00000037920-10059.481Cebus_capucinus
ENSXETG00000012164hdlbp9983.451ENSCATG00000039363HDLBP9985.246Cercocebus_atys
ENSXETG00000012164hdlbp9983.176ENSCLAG00000002365HDLBP10083.176Chinchilla_lanigera
ENSXETG00000012164hdlbp9982.558ENSCSAG00000005781HDLBP10082.558Chlorocebus_sabaeus
ENSXETG00000012164hdlbp9262.433ENSCHOG00000003882-10062.433Choloepus_hoffmanni
ENSXETG00000012164hdlbp9981.947ENSCPBG00000002442HDLBP10081.947Chrysemys_picta_bellii
ENSXETG00000012164hdlbp9983.451ENSCANG00000033571HDLBP9985.246Colobus_angolensis_palliatus
ENSXETG00000012164hdlbp8943.129ENSCGRG000010105704921511C20Rik10043.129Cricetulus_griseus_chok1gshd
ENSXETG00000012164hdlbp9983.373ENSCGRG00001006086Hdlbp10083.373Cricetulus_griseus_chok1gshd
ENSXETG00000012164hdlbp9245.714ENSCGRG00000015720Gm3829445.714Cricetulus_griseus_crigri
ENSXETG00000012164hdlbp9983.373ENSCGRG00000014444Hdlbp10083.373Cricetulus_griseus_crigri
ENSXETG00000012164hdlbp9978.118ENSCSEG00000008853hdlbpa9978.118Cynoglossus_semilaevis
ENSXETG00000012164hdlbp9978.056ENSCVAG00000017892hdlbpa9978.056Cyprinodon_variegatus
ENSXETG00000012164hdlbp9977.856ENSDARG00000009830hdlbpa10077.880Danio_rerio
ENSXETG00000012164hdlbp9980.859ENSDNOG00000006753HDLBP10080.859Dasypus_novemcinctus
ENSXETG00000012164hdlbp9678.261ENSETEG00000005416-7978.261Echinops_telfairi
ENSXETG00000012164hdlbp9983.529ENSEASG00005008249HDLBP10083.529Equus_asinus_asinus
ENSXETG00000012164hdlbp9752.585ENSECAG00000030885-9952.585Equus_caballus
ENSXETG00000012164hdlbp9983.529ENSECAG00000012829HDLBP10083.529Equus_caballus
ENSXETG00000012164hdlbp9847.496ENSECAG00000028723-9947.496Equus_caballus
ENSXETG00000012164hdlbp8973.280ENSEEUG00000014648HDLBP10073.280Erinaceus_europaeus
ENSXETG00000012164hdlbp9976.216ENSELUG00000010700hdlbpa9976.216Esox_lucius
ENSXETG00000012164hdlbp9983.451ENSFCAG00000010455HDLBP10083.451Felis_catus
ENSXETG00000012164hdlbp9985.008ENSFALG00000003437HDLBP10085.086Ficedula_albicollis
ENSXETG00000012164hdlbp9983.255ENSFDAG00000000456HDLBP10083.255Fukomys_damarensis
ENSXETG00000012164hdlbp9977.900ENSFHEG00000004848hdlbpa9978.169Fundulus_heteroclitus
ENSXETG00000012164hdlbp9976.713ENSGMOG00000009932hdlbpa9976.713Gadus_morhua
ENSXETG00000012164hdlbp9985.008ENSGALG00000005823HDLBP10085.086Gallus_gallus
ENSXETG00000012164hdlbp9952.873ENSGAFG00000016766hdlbpa9952.873Gambusia_affinis
ENSXETG00000012164hdlbp9976.116ENSGACG00000004648hdlbpa9976.429Gasterosteus_aculeatus
ENSXETG00000012164hdlbp9984.694ENSGAGG00000004256HDLBP10084.694Gopherus_agassizii
ENSXETG00000012164hdlbp9983.216ENSGGOG00000004392HDLBP9985.246Gorilla_gorilla
ENSXETG00000012164hdlbp9978.135ENSHBUG00000001136hdlbpa9978.292Haplochromis_burtoni
ENSXETG00000012164hdlbp9982.862ENSHGLG00000004910HDLBP10082.862Heterocephalus_glaber_female
ENSXETG00000012164hdlbp9982.862ENSHGLG00100013326HDLBP10082.862Heterocephalus_glaber_male
ENSXETG00000012164hdlbp9977.379ENSHCOG00000014837hdlbpa9977.379Hippocampus_comes
ENSXETG00000012164hdlbp9978.305ENSIPUG00000013088hdlbp9978.305Ictalurus_punctatus
ENSXETG00000012164hdlbp8368.061ENSIPUG00000013177-9068.061Ictalurus_punctatus
ENSXETG00000012164hdlbp9983.097ENSSTOG00000013331HDLBP10083.097Ictidomys_tridecemlineatus
ENSXETG00000012164hdlbp8941.001ENSJJAG00000013712-9241.192Jaculus_jaculus
ENSXETG00000012164hdlbp9983.686ENSJJAG00000003596Hdlbp10083.686Jaculus_jaculus
ENSXETG00000012164hdlbp9978.196ENSKMAG00000007571hdlbpa9978.353Kryptolebias_marmoratus
ENSXETG00000012164hdlbp9977.891ENSLBEG00000027461hdlbpa9978.125Labrus_bergylta
ENSXETG00000012164hdlbp9982.219ENSLACG00000003592HDLBP9982.261Latimeria_chalumnae
ENSXETG00000012164hdlbp9978.712ENSLOCG00000006278hdlbpa9978.712Lepisosteus_oculatus
ENSXETG00000012164hdlbp9983.059ENSLAFG00000014826HDLBP10083.059Loxodonta_africana
ENSXETG00000012164hdlbp9983.451ENSMFAG00000033641HDLBP9985.246Macaca_fascicularis
ENSXETG00000012164hdlbp9983.137ENSMMUG00000004730HDLBP10083.137Macaca_mulatta
ENSXETG00000012164hdlbp9983.451ENSMNEG00000024260HDLBP9985.246Macaca_nemestrina
ENSXETG00000012164hdlbp9983.451ENSMLEG00000042734HDLBP9985.246Mandrillus_leucophaeus
ENSXETG00000012164hdlbp9978.056ENSMAMG00000008611hdlbpa9978.213Mastacembelus_armatus
ENSXETG00000012164hdlbp9978.135ENSMZEG00005009513hdlbpa9978.292Maylandia_zebra
ENSXETG00000012164hdlbp9982.575ENSMGAG00000003686HDLBP10085.827Meleagris_gallopavo
ENSXETG00000012164hdlbp9983.373ENSMAUG00000017743Hdlbp10083.373Mesocricetus_auratus
ENSXETG00000012164hdlbp9983.294ENSMICG00000004569HDLBP10083.294Microcebus_murinus
ENSXETG00000012164hdlbp9983.373ENSMOCG00000006679Hdlbp10083.373Microtus_ochrogaster
ENSXETG00000012164hdlbp9674.376ENSMMOG00000006880hdlbpa9974.376Mola_mola
ENSXETG00000012164hdlbp9982.490ENSMODG00000016033HDLBP10082.490Monodelphis_domestica
ENSXETG00000012164hdlbp9978.074ENSMALG00000015095hdlbpa9978.309Monopterus_albus
ENSXETG00000012164hdlbp8943.064MGP_CAROLIEiJ_G00333744921511C20Rik10043.064Mus_caroli
ENSXETG00000012164hdlbp9243.782MGP_CAROLIEiJ_G0033373Gm3829443.866Mus_caroli
ENSXETG00000012164hdlbp9983.451MGP_CAROLIEiJ_G0014456Hdlbp10083.451Mus_caroli
ENSXETG00000012164hdlbp9983.294ENSMUSG00000034088Hdlbp10083.294Mus_musculus
ENSXETG00000012164hdlbp9343.635ENSMUSG00000062791Gm3829443.635Mus_musculus
ENSXETG00000012164hdlbp8942.737ENSMUSG000000498154921511C20Rik10042.737Mus_musculus
ENSXETG00000012164hdlbp9983.451MGP_PahariEiJ_G0027692Hdlbp10083.451Mus_pahari
ENSXETG00000012164hdlbp9343.960MGP_PahariEiJ_G0031913Gm3829443.960Mus_pahari
ENSXETG00000012164hdlbp8943.340MGP_PahariEiJ_G00319144921511C20Rik10043.340Mus_pahari
ENSXETG00000012164hdlbp9983.451MGP_SPRETEiJ_G0015260Hdlbp10083.451Mus_spretus
ENSXETG00000012164hdlbp8942.316MGP_SPRETEiJ_G00345394921511C20Rik10042.316Mus_spretus
ENSXETG00000012164hdlbp9343.121MGP_SPRETEiJ_G0034538Gm3829443.121Mus_spretus
ENSXETG00000012164hdlbp9983.529ENSMPUG00000000163HDLBP10083.529Mustela_putorius_furo
ENSXETG00000012164hdlbp9983.805ENSMLUG00000005628HDLBP10083.805Myotis_lucifugus
ENSXETG00000012164hdlbp9983.137ENSNGAG00000014873Hdlbp10083.137Nannospalax_galili
ENSXETG00000012164hdlbp9778.365ENSNBRG00000000051hdlbpa9978.526Neolamprologus_brichardi
ENSXETG00000012164hdlbp9983.294ENSNLEG00000013818HDLBP10083.294Nomascus_leucogenys
ENSXETG00000012164hdlbp9476.963ENSNLEG00000031018-9977.817Nomascus_leucogenys
ENSXETG00000012164hdlbp9886.689ENSMEUG00000008427HDLBP8886.689Notamacropus_eugenii
ENSXETG00000012164hdlbp9382.747ENSOPRG00000011965-9482.747Ochotona_princeps
ENSXETG00000012164hdlbp9978.931ENSODEG00000017391-10078.931Octodon_degus
ENSXETG00000012164hdlbp9982.783ENSODEG00000012313-10082.783Octodon_degus
ENSXETG00000012164hdlbp9978.135ENSONIG00000019272hdlbpa9978.292Oreochromis_niloticus
ENSXETG00000012164hdlbp6189.437ENSOANG00000021864-10089.437Ornithorhynchus_anatinus
ENSXETG00000012164hdlbp9984.458ENSOANG00000011759-10084.458Ornithorhynchus_anatinus
ENSXETG00000012164hdlbp9982.431ENSOCUG00000012667HDLBP10082.431Oryctolagus_cuniculus
ENSXETG00000012164hdlbp9977.354ENSORLG00000002226hdlbpa9977.354Oryzias_latipes
ENSXETG00000012164hdlbp9977.432ENSORLG00020007905hdlbpa9779.836Oryzias_latipes_hni
ENSXETG00000012164hdlbp9977.414ENSORLG00015004126hdlbpa9977.432Oryzias_latipes_hsok
ENSXETG00000012164hdlbp9975.469ENSOMEG00000000247hdlbpa9977.188Oryzias_melastigma
ENSXETG00000012164hdlbp9983.137ENSOGAG00000000738HDLBP10083.137Otolemur_garnettii
ENSXETG00000012164hdlbp9980.484ENSOARG00000017870HDLBP10080.484Ovis_aries
ENSXETG00000012164hdlbp9983.137ENSPPAG00000023318HDLBP9985.246Pan_paniscus
ENSXETG00000012164hdlbp9983.529ENSPPRG00000010215HDLBP10083.529Panthera_pardus
ENSXETG00000012164hdlbp9286.750ENSPTIG00000009328HDLBP9786.750Panthera_tigris_altaica
ENSXETG00000012164hdlbp9983.137ENSPTRG00000013121HDLBP9985.246Pan_troglodytes
ENSXETG00000012164hdlbp9983.451ENSPANG00000011832HDLBP9985.246Papio_anubis
ENSXETG00000012164hdlbp9978.091ENSPKIG00000002392hdlbpa9978.091Paramormyrops_kingsleyae
ENSXETG00000012164hdlbp9484.464ENSPSIG00000010068HDLBP10084.464Pelodiscus_sinensis
ENSXETG00000012164hdlbp9968.247ENSPMGG00000002102hdlbpa9968.247Periophthalmus_magnuspinnatus
ENSXETG00000012164hdlbp9983.451ENSPEMG00000017704Hdlbp10083.451Peromyscus_maniculatus_bairdii
ENSXETG00000012164hdlbp9883.241ENSPCIG00000015375HDLBP9583.241Phascolarctos_cinereus
ENSXETG00000012164hdlbp9977.952ENSPFOG00000000236hdlbpa9977.952Poecilia_formosa
ENSXETG00000012164hdlbp9478.891ENSPLAG00000006033hdlbpa10079.056Poecilia_latipinna
ENSXETG00000012164hdlbp9977.856ENSPMEG00000006627hdlbpa9978.013Poecilia_mexicana
ENSXETG00000012164hdlbp9959.567ENSPREG00000014450hdlbpa9959.567Poecilia_reticulata
ENSXETG00000012164hdlbp9983.059ENSPPYG00000013351HDLBP10083.059Pongo_abelii
ENSXETG00000012164hdlbp9978.512ENSPCAG00000011136HDLBP7978.512Procavia_capensis
ENSXETG00000012164hdlbp9379.750ENSPCOG00000021622HDLBP9279.750Propithecus_coquereli
ENSXETG00000012164hdlbp9982.390ENSPVAG00000000555HDLBP10082.390Pteropus_vampyrus
ENSXETG00000012164hdlbp9978.213ENSPNYG00000020753hdlbpa9978.370Pundamilia_nyererei
ENSXETG00000012164hdlbp9975.411ENSPNAG00000029610hdlbpa9975.411Pygocentrus_nattereri
ENSXETG00000012164hdlbp8842.177ENSRNOG00000028847AABR07040251.110042.177Rattus_norvegicus
ENSXETG00000012164hdlbp9983.373ENSRNOG00000031479Hdlbp10083.373Rattus_norvegicus
ENSXETG00000012164hdlbp9042.744ENSRNOG00000042823RGD15612309642.744Rattus_norvegicus
ENSXETG00000012164hdlbp9345.302ENSRNOG00000031294RGD15631049445.386Rattus_norvegicus
ENSXETG00000012164hdlbp9983.451ENSRBIG00000041381HDLBP10083.451Rhinopithecus_bieti
ENSXETG00000012164hdlbp9983.451ENSRROG00000034263HDLBP10083.451Rhinopithecus_roxellana
ENSXETG00000012164hdlbp9072.342ENSSBOG00000033067-9672.342Saimiri_boliviensis_boliviensis
ENSXETG00000012164hdlbp9982.889ENSSBOG00000029714-9985.519Saimiri_boliviensis_boliviensis
ENSXETG00000012164hdlbp9983.451ENSSHAG00000012422HDLBP10083.451Sarcophilus_harrisii
ENSXETG00000012164hdlbp9978.840ENSSFOG00015018627hdlbp9978.840Scleropages_formosus
ENSXETG00000012164hdlbp9978.660ENSSMAG00000002382hdlbpa9978.894Scophthalmus_maximus
ENSXETG00000012164hdlbp9979.013ENSSDUG00000022258hdlbpa9979.013Seriola_dumerili
ENSXETG00000012164hdlbp9979.013ENSSLDG00000004437hdlbpa9979.013Seriola_lalandi_dorsalis
ENSXETG00000012164hdlbp9371.453ENSSARG00000012639HDLBP9471.453Sorex_araneus
ENSXETG00000012164hdlbp9983.909ENSSPUG00000009182HDLBP10083.909Sphenodon_punctatus
ENSXETG00000012164hdlbp9978.292ENSSPAG00000009145hdlbpa9978.448Stegastes_partitus
ENSXETG00000012164hdlbp9982.353ENSSSCG00000016379HDLBP10082.981Sus_scrofa
ENSXETG00000012164hdlbp9485.754ENSTGUG00000006189HDLBP10085.754Taeniopygia_guttata
ENSXETG00000012164hdlbp9977.376ENSTRUG00000012148hdlbpa9977.376Takifugu_rubripes
ENSXETG00000012164hdlbp9877.381ENSTNIG00000004185hdlbpa10077.381Tetraodon_nigroviridis
ENSXETG00000012164hdlbp8878.931ENSTBEG00000001860HDLBP8878.931Tupaia_belangeri
ENSXETG00000012164hdlbp9986.207ENSTTRG00000015251HDLBP7786.207Tursiops_truncatus
ENSXETG00000012164hdlbp9983.294ENSUAMG00000018383HDLBP10083.294Ursus_americanus
ENSXETG00000012164hdlbp9983.216ENSUMAG00000010539HDLBP10083.216Ursus_maritimus
ENSXETG00000012164hdlbp9157.238ENSVPAG00000003112HDLBP9357.238Vicugna_pacos
ENSXETG00000012164hdlbp9484.120ENSVVUG00000022797HDLBP9984.120Vulpes_vulpes
ENSXETG00000012164hdlbp9977.978ENSXCOG00000005943hdlbpa9977.978Xiphophorus_couchianus
ENSXETG00000012164hdlbp9977.804ENSXMAG00000003787hdlbpa9977.960Xiphophorus_maculatus

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