EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000012326 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: -
Full Name: Xenopus tropicalis spalt-like transcription factor 4 (sall4)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10991 bases
Position: chrGL172684.1:149974-160964
Accession: NM_001001458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000026959	zf-C2H2	PF00096.26	5e-28	1	6
ENSXETP00000026959	zf-C2H2	PF00096.26	5e-28	2	6
ENSXETP00000026959	zf-C2H2	PF00096.26	5e-28	3	6
ENSXETP00000026959	zf-C2H2	PF00096.26	5e-28	4	6
ENSXETP00000026959	zf-C2H2	PF00096.26	5e-28	5	6
ENSXETP00000026959	zf-C2H2	PF00096.26	5e-28	6	6
ENSXETP00000026959	zf-met	PF12874.7	1.2e-15	1	3
ENSXETP00000026959	zf-met	PF12874.7	1.2e-15	2	3
ENSXETP00000026959	zf-met	PF12874.7	1.2e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000026959	-	4422	XM_012971614	ENSXETP00000026959	1067 (aa)	XP_012827068	Q6NX24

Gene Model

Click here to download ENSXETG00000012326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000012326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000012326	sall4	59	55.102	ENSXETG00000017175	-	99	55.102
ENSXETG00000012326	sall4	55	44.643	ENSXETG00000012506	znf91	99	48.000
ENSXETG00000012326	sall4	57	54.902	ENSXETG00000010512	-	98	54.902
ENSXETG00000012326	sall4	57	50.000	ENSXETG00000027149	-	97	51.020
ENSXETG00000012326	sall4	56	55.102	ENSXETG00000002717	-	99	55.102
ENSXETG00000012326	sall4	57	47.170	ENSXETG00000006575	znf420	72	50.943
ENSXETG00000012326	sall4	58	48.077	ENSXETG00000008801	znf628	98	39.437
ENSXETG00000012326	sall4	94	65.068	ENSXETG00000018417	sall1	95	65.068
ENSXETG00000012326	sall4	100	41.209	ENSXETG00000000845	sall3	100	41.758
ENSXETG00000012326	sall4	55	51.852	ENSXETG00000016781	-	99	51.852
ENSXETG00000012326	sall4	59	55.556	ENSXETG00000030307	-	99	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000012326	sall4	100	50.758	ENSG00000101115	SALL4	100	59.615	Homo_sapiens
ENSXETG00000012326	sall4	100	48.709	ENSAPOG00000002465	sall4	100	48.798	Acanthochromis_polyacanthus
ENSXETG00000012326	sall4	100	50.580	ENSAMEG00000013250	-	99	53.096	Ailuropoda_melanoleuca
ENSXETG00000012326	sall4	100	49.336	ENSACIG00000017298	sall4	100	49.336	Amphilophus_citrinellus
ENSXETG00000012326	sall4	100	48.796	ENSAOCG00000023678	sall4	100	48.891	Amphiprion_ocellaris
ENSXETG00000012326	sall4	100	48.707	ENSAPEG00000000751	sall4	100	48.802	Amphiprion_percula
ENSXETG00000012326	sall4	100	48.246	ENSATEG00000024480	sall4	100	48.246	Anabas_testudineus
ENSXETG00000012326	sall4	100	64.542	ENSAPLG00000006498	SALL4	100	64.542	Anas_platyrhynchos
ENSXETG00000012326	sall4	100	60.424	ENSACAG00000012748	SALL4	100	60.954	Anolis_carolinensis
ENSXETG00000012326	sall4	100	49.735	ENSANAG00000023352	SALL4	100	50.000	Aotus_nancymaae
ENSXETG00000012326	sall4	100	49.561	ENSACLG00000017851	sall4	100	49.561	Astatotilapia_calliptera
ENSXETG00000012326	sall4	99	50.922	ENSAMXG00000001254	sall4	99	51.322	Astyanax_mexicanus
ENSXETG00000012326	sall4	100	47.018	ENSBTAG00000003101	SALL4	100	47.322	Bos_taurus
ENSXETG00000012326	sall4	83	52.539	ENSCJAG00000000591	SALL4	99	52.539	Callithrix_jacchus
ENSXETG00000012326	sall4	100	49.866	ENSCAFG00000011738	-	100	50.134	Canis_familiaris
ENSXETG00000012326	sall4	100	49.777	ENSCAFG00020021870	SALL4	100	50.045	Canis_lupus_dingo
ENSXETG00000012326	sall4	100	46.410	ENSCHIG00000026270	SALL4	100	46.497	Capra_hircus
ENSXETG00000012326	sall4	100	48.722	ENSTSYG00000007359	SALL4	100	57.692	Carlito_syrichta
ENSXETG00000012326	sall4	97	49.203	ENSCAPG00000012135	SALL4	96	49.115	Cavia_aperea
ENSXETG00000012326	sall4	100	46.126	ENSCCAG00000029512	-	100	62.745	Cebus_capucinus
ENSXETG00000012326	sall4	100	50.534	ENSCATG00000030757	SALL4	100	50.801	Cercocebus_atys
ENSXETG00000012326	sall4	100	47.760	ENSCLAG00000010479	SALL4	100	48.046	Chinchilla_lanigera
ENSXETG00000012326	sall4	100	50.534	ENSCSAG00000015269	SALL4	100	50.801	Chlorocebus_sabaeus
ENSXETG00000012326	sall4	99	64.716	ENSCPBG00000014995	SALL4	100	64.658	Chrysemys_picta_bellii
ENSXETG00000012326	sall4	100	50.491	ENSCANG00000036463	SALL4	100	50.847	Colobus_angolensis_palliatus
ENSXETG00000012326	sall4	100	47.476	ENSCGRG00001019569	Sall4	100	51.953	Cricetulus_griseus_chok1gshd
ENSXETG00000012326	sall4	100	47.387	ENSCGRG00000000462	Sall4	98	76.250	Cricetulus_griseus_crigri
ENSXETG00000012326	sall4	100	49.779	ENSCSEG00000014604	sall4	100	50.000	Cynoglossus_semilaevis
ENSXETG00000012326	sall4	100	48.802	ENSCVAG00000010815	sall4	100	48.668	Cyprinodon_variegatus
ENSXETG00000012326	sall4	99	51.113	ENSDARG00000044485	sall4	99	51.200	Danio_rerio
ENSXETG00000012326	sall4	100	50.445	ENSDNOG00000040633	SALL4	100	50.710	Dasypus_novemcinctus
ENSXETG00000012326	sall4	100	46.359	ENSDORG00000012841	Sall4	100	79.487	Dipodomys_ordii
ENSXETG00000012326	sall4	71	62.963	ENSETEG00000012475	-	64	62.963	Echinops_telfairi
ENSXETG00000012326	sall4	100	49.167	ENSECAG00000018533	SALL4	100	49.343	Equus_caballus
ENSXETG00000012326	sall4	100	48.750	ENSEEUG00000003649	SALL4	99	49.014	Erinaceus_europaeus
ENSXETG00000012326	sall4	100	48.446	ENSELUG00000005696	sall4	100	48.656	Esox_lucius
ENSXETG00000012326	sall4	100	49.291	ENSFCAG00000002822	SALL4	86	63.636	Felis_catus
ENSXETG00000012326	sall4	100	63.318	ENSFALG00000013149	SALL4	100	63.318	Ficedula_albicollis
ENSXETG00000012326	sall4	100	48.184	ENSFDAG00000017812	SALL4	100	48.498	Fukomys_damarensis
ENSXETG00000012326	sall4	100	48.887	ENSFHEG00000014187	sall4	100	48.887	Fundulus_heteroclitus
ENSXETG00000012326	sall4	100	48.444	ENSGMOG00000003822	sall4	100	49.072	Gadus_morhua
ENSXETG00000012326	sall4	100	63.016	ENSGALG00000041365	SALL4	100	63.285	Gallus_gallus
ENSXETG00000012326	sall4	100	48.709	ENSGAFG00000019925	sall4	100	48.891	Gambusia_affinis
ENSXETG00000012326	sall4	100	48.415	ENSGACG00000011124	sall4	100	48.906	Gasterosteus_aculeatus
ENSXETG00000012326	sall4	100	64.960	ENSGAGG00000002297	SALL4	100	64.960	Gopherus_agassizii
ENSXETG00000012326	sall4	100	50.668	ENSGGOG00000001832	SALL4	100	51.024	Gorilla_gorilla
ENSXETG00000012326	sall4	100	49.428	ENSHBUG00000007327	sall4	100	49.428	Haplochromis_burtoni
ENSXETG00000012326	sall4	97	50.279	ENSHGLG00000009043	SALL4	95	50.279	Heterocephalus_glaber_female
ENSXETG00000012326	sall4	97	50.186	ENSHGLG00100002722	SALL4	95	50.186	Heterocephalus_glaber_male
ENSXETG00000012326	sall4	100	48.356	ENSHCOG00000008519	sall4	100	48.670	Hippocampus_comes
ENSXETG00000012326	sall4	99	51.475	ENSIPUG00000019170	sall4	99	51.653	Ictalurus_punctatus
ENSXETG00000012326	sall4	69	59.615	ENSSTOG00000025002	SALL4	98	84.286	Ictidomys_tridecemlineatus
ENSXETG00000012326	sall4	100	49.118	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSXETG00000012326	sall4	100	49.286	ENSKMAG00000002501	sall4	100	50.134	Kryptolebias_marmoratus
ENSXETG00000012326	sall4	100	48.981	ENSLBEG00000019951	sall4	100	48.729	Labrus_bergylta
ENSXETG00000012326	sall4	96	55.243	ENSLACG00000013898	SALL4	100	62.903	Latimeria_chalumnae
ENSXETG00000012326	sall4	100	55.287	ENSLOCG00000002427	sall4	100	55.416	Lepisosteus_oculatus
ENSXETG00000012326	sall4	100	49.421	ENSLAFG00000004309	SALL4	100	49.600	Loxodonta_africana
ENSXETG00000012326	sall4	100	50.534	ENSMFAG00000027169	SALL4	100	50.801	Macaca_fascicularis
ENSXETG00000012326	sall4	93	50.685	ENSMMUG00000003870	SALL4	100	59.615	Macaca_mulatta
ENSXETG00000012326	sall4	93	50.685	ENSMNEG00000035995	SALL4	100	50.783	Macaca_nemestrina
ENSXETG00000012326	sall4	100	50.712	ENSMLEG00000030467	SALL4	100	50.890	Mandrillus_leucophaeus
ENSXETG00000012326	sall4	100	49.387	ENSMAMG00000005223	sall4	100	49.387	Mastacembelus_armatus
ENSXETG00000012326	sall4	100	49.561	ENSMZEG00005023418	sall4	100	49.561	Maylandia_zebra
ENSXETG00000012326	sall4	76	63.567	ENSMGAG00000009344	SALL4	100	64.076	Meleagris_gallopavo
ENSXETG00000012326	sall4	100	47.822	ENSMAUG00000015814	Sall4	98	83.099	Mesocricetus_auratus
ENSXETG00000012326	sall4	100	49.603	ENSMICG00000000027	SALL4	100	49.691	Microcebus_murinus
ENSXETG00000012326	sall4	100	47.244	ENSMOCG00000018245	Sall4	98	83.333	Microtus_ochrogaster
ENSXETG00000012326	sall4	100	49.821	ENSMMOG00000014929	sall4	100	49.910	Mola_mola
ENSXETG00000012326	sall4	100	57.890	ENSMODG00000016387	SALL4	97	57.890	Monodelphis_domestica
ENSXETG00000012326	sall4	100	48.373	ENSMALG00000018709	sall4	100	48.805	Monopterus_albus
ENSXETG00000012326	sall4	100	46.561	MGP_CAROLIEiJ_G0024723	Sall4	98	85.915	Mus_caroli
ENSXETG00000012326	sall4	100	46.725	ENSMUSG00000027547	Sall4	98	85.915	Mus_musculus
ENSXETG00000012326	sall4	100	45.415	MGP_PahariEiJ_G0026164	Sall4	98	85.915	Mus_pahari
ENSXETG00000012326	sall4	100	46.713	MGP_SPRETEiJ_G0025643	Sall4	98	85.915	Mus_spretus
ENSXETG00000012326	sall4	100	49.246	ENSMPUG00000017543	SALL4	96	49.822	Mustela_putorius_furo
ENSXETG00000012326	sall4	98	51.855	ENSMLUG00000007060	-	99	51.855	Myotis_lucifugus
ENSXETG00000012326	sall4	100	48.942	ENSMLUG00000008405	-	100	48.942	Myotis_lucifugus
ENSXETG00000012326	sall4	99	38.783	ENSMLUG00000028073	-	99	38.510	Myotis_lucifugus
ENSXETG00000012326	sall4	100	48.347	ENSNGAG00000017833	Sall4	93	59.615	Nannospalax_galili
ENSXETG00000012326	sall4	100	49.471	ENSNBRG00000001829	sall4	100	49.650	Neolamprologus_brichardi
ENSXETG00000012326	sall4	100	50.400	ENSNLEG00000007013	SALL4	100	50.618	Nomascus_leucogenys
ENSXETG00000012326	sall4	85	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSXETG00000012326	sall4	100	49.777	ENSOPRG00000011640	SALL4	100	50.000	Ochotona_princeps
ENSXETG00000012326	sall4	100	49.473	ENSONIG00000016557	sall4	100	50.000	Oreochromis_niloticus
ENSXETG00000012326	sall4	100	64.093	ENSOANG00000008667	SALL4	97	64.093	Ornithorhynchus_anatinus
ENSXETG00000012326	sall4	96	50.609	ENSOCUG00000011797	SALL4	98	50.609	Oryctolagus_cuniculus
ENSXETG00000012326	sall4	100	47.764	ENSORLG00000016130	sall4	100	47.792	Oryzias_latipes
ENSXETG00000012326	sall4	100	48.085	ENSORLG00020007339	sall4	100	48.085	Oryzias_latipes_hni
ENSXETG00000012326	sall4	100	48.178	ENSORLG00015002265	sall4	100	48.178	Oryzias_latipes_hsok
ENSXETG00000012326	sall4	100	49.057	ENSOMEG00000017344	sall4	100	49.117	Oryzias_melastigma
ENSXETG00000012326	sall4	97	51.740	ENSOGAG00000013799	SALL4	100	51.740	Otolemur_garnettii
ENSXETG00000012326	sall4	100	45.463	ENSOARG00000014570	SALL4	100	45.463	Ovis_aries
ENSXETG00000012326	sall4	100	50.757	ENSPPAG00000038064	SALL4	100	51.024	Pan_paniscus
ENSXETG00000012326	sall4	100	49.468	ENSPPRG00000008677	SALL4	88	63.636	Panthera_pardus
ENSXETG00000012326	sall4	100	50.579	ENSPTRG00000013631	SALL4	100	50.935	Pan_troglodytes
ENSXETG00000012326	sall4	93	50.685	ENSPANG00000021792	SALL4	100	50.783	Papio_anubis
ENSXETG00000012326	sall4	100	53.036	ENSPKIG00000007074	sall4	100	53.434	Paramormyrops_kingsleyae
ENSXETG00000012326	sall4	100	64.690	ENSPSIG00000009066	SALL4	100	64.690	Pelodiscus_sinensis
ENSXETG00000012326	sall4	100	48.587	ENSPMGG00000022551	sall4	100	48.725	Periophthalmus_magnuspinnatus
ENSXETG00000012326	sall4	100	47.788	ENSPEMG00000022706	Sall4	98	85.915	Peromyscus_maniculatus_bairdii
ENSXETG00000012326	sall4	100	59.328	ENSPCIG00000022838	SALL4	97	59.328	Phascolarctos_cinereus
ENSXETG00000012326	sall4	100	49.644	ENSPFOG00000001442	sall4	100	49.644	Poecilia_formosa
ENSXETG00000012326	sall4	100	49.555	ENSPLAG00000008760	sall4	100	49.555	Poecilia_latipinna
ENSXETG00000012326	sall4	100	49.688	ENSPMEG00000008497	sall4	100	49.688	Poecilia_mexicana
ENSXETG00000012326	sall4	100	48.839	ENSPREG00000021140	sall4	100	48.839	Poecilia_reticulata
ENSXETG00000012326	sall4	100	50.667	ENSPPYG00000011138	SALL4	100	50.618	Pongo_abelii
ENSXETG00000012326	sall4	100	46.883	ENSPCAG00000004726	SALL4	99	46.848	Procavia_capensis
ENSXETG00000012326	sall4	100	49.251	ENSPCOG00000016321	SALL4	88	63.636	Propithecus_coquereli
ENSXETG00000012326	sall4	94	49.389	ENSPVAG00000002075	SALL4	94	49.717	Pteropus_vampyrus
ENSXETG00000012326	sall4	100	49.296	ENSPNYG00000021738	sall4	100	49.296	Pundamilia_nyererei
ENSXETG00000012326	sall4	99	51.703	ENSPNAG00000020929	sall4	99	51.968	Pygocentrus_nattereri
ENSXETG00000012326	sall4	100	47.198	ENSRNOG00000050035	Sall4	87	61.818	Rattus_norvegicus
ENSXETG00000012326	sall4	100	50.669	ENSRBIG00000039876	SALL4	100	51.026	Rhinopithecus_bieti
ENSXETG00000012326	sall4	100	50.669	ENSRROG00000036585	SALL4	100	51.026	Rhinopithecus_roxellana
ENSXETG00000012326	sall4	100	50.580	ENSSBOG00000030011	SALL4	100	50.580	Saimiri_boliviensis_boliviensis
ENSXETG00000012326	sall4	97	69.668	ENSSHAG00000018013	SALL4	89	69.668	Sarcophilus_harrisii
ENSXETG00000012326	sall4	100	51.932	ENSSFOG00015021075	sall4	100	52.201	Scleropages_formosus
ENSXETG00000012326	sall4	100	48.376	ENSSMAG00000019218	sall4	99	48.601	Scophthalmus_maximus
ENSXETG00000012326	sall4	100	49.244	ENSSDUG00000004657	sall4	100	49.379	Seriola_dumerili
ENSXETG00000012326	sall4	100	49.911	ENSSLDG00000004973	sall4	100	49.956	Seriola_lalandi_dorsalis
ENSXETG00000012326	sall4	100	48.564	ENSSPAG00000001978	sall4	100	49.023	Stegastes_partitus
ENSXETG00000012326	sall4	100	48.981	ENSSSCG00000007479	SALL4	100	49.070	Sus_scrofa
ENSXETG00000012326	sall4	100	49.120	ENSTRUG00000007410	sall4	100	49.426	Takifugu_rubripes
ENSXETG00000012326	sall4	100	49.687	ENSTNIG00000012460	sall4	100	50.089	Tetraodon_nigroviridis
ENSXETG00000012326	sall4	97	48.922	ENSTTRG00000007753	SALL4	99	48.828	Tursiops_truncatus
ENSXETG00000012326	sall4	100	50.223	ENSUAMG00000010113	SALL4	100	50.267	Ursus_americanus
ENSXETG00000012326	sall4	97	50.935	ENSUMAG00000024274	SALL4	98	50.935	Ursus_maritimus
ENSXETG00000012326	sall4	100	45.455	ENSXCOG00000015467	sall4	100	45.545	Xiphophorus_couchianus
ENSXETG00000012326	sall4	100	45.455	ENSXMAG00000012692	sall4	100	45.545	Xiphophorus_maculatus