EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000012470 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: -
Full Name: Xenopus tropicalis FSHD region gene 1 (frg1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 6811 bases
Position: chrGL173255.1:144612-151422
Accession: NM_001006886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000027264	FRG1	PF06229.12	6.9e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000027264	-	999	-	ENSXETP00000027264	256 (aa)	XP_012815664	Q6DDA8

Gene Model

Click here to download ENSXETG00000012470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000012470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000012470	frg1	100	79.457	ENSG00000109536	FRG1	100	85.345	Homo_sapiens
ENSXETG00000012470	frg1	100	72.266	ENSAPOG00000001060	frg1	100	71.484	Acanthochromis_polyacanthus
ENSXETG00000012470	frg1	100	79.070	ENSAMEG00000013503	FRG1	100	79.457	Ailuropoda_melanoleuca
ENSXETG00000012470	frg1	86	73.303	ENSACIG00000022283	frg1	99	73.303	Amphilophus_citrinellus
ENSXETG00000012470	frg1	86	72.851	ENSAOCG00000024240	frg1	88	72.000	Amphiprion_ocellaris
ENSXETG00000012470	frg1	100	73.047	ENSAPEG00000002486	frg1	100	72.266	Amphiprion_percula
ENSXETG00000012470	frg1	100	71.875	ENSATEG00000010414	frg1	100	71.094	Anabas_testudineus
ENSXETG00000012470	frg1	100	80.078	ENSAPLG00000007785	-	100	80.078	Anas_platyrhynchos
ENSXETG00000012470	frg1	100	80.469	ENSACAG00000006877	-	100	80.469	Anolis_carolinensis
ENSXETG00000012470	frg1	100	80.934	ENSANAG00000020876	FRG1	100	80.934	Aotus_nancymaae
ENSXETG00000012470	frg1	100	66.797	ENSACLG00000027065	frg1	100	66.016	Astatotilapia_calliptera
ENSXETG00000012470	frg1	100	69.261	ENSAMXG00000032700	frg1	100	73.541	Astyanax_mexicanus
ENSXETG00000012470	frg1	100	79.070	ENSBTAG00000007089	FRG1	100	79.457	Bos_taurus
ENSXETG00000012470	frg1	99	38.971	WBGene00014177	frg-1	86	38.912	Caenorhabditis_elegans
ENSXETG00000012470	frg1	100	80.934	ENSCJAG00000011272	FRG1	100	80.934	Callithrix_jacchus
ENSXETG00000012470	frg1	100	79.070	ENSCAFG00000007135	FRG1	100	79.457	Canis_familiaris
ENSXETG00000012470	frg1	82	83.019	ENSCAFG00020000082	-	85	83.019	Canis_lupus_dingo
ENSXETG00000012470	frg1	100	79.070	ENSCHIG00000011585	-	100	79.457	Capra_hircus
ENSXETG00000012470	frg1	98	54.941	ENSTSYG00000031599	-	100	55.336	Carlito_syrichta
ENSXETG00000012470	frg1	89	79.825	ENSCAPG00000016056	-	92	80.444	Cavia_aperea
ENSXETG00000012470	frg1	100	80.545	ENSCPOG00000022277	-	100	80.545	Cavia_porcellus
ENSXETG00000012470	frg1	100	80.934	ENSCCAG00000024627	FRG1	100	80.934	Cebus_capucinus
ENSXETG00000012470	frg1	100	79.457	ENSCATG00000029230	FRG1	100	79.845	Cercocebus_atys
ENSXETG00000012470	frg1	100	80.545	ENSCLAG00000000370	-	100	80.545	Chinchilla_lanigera
ENSXETG00000012470	frg1	100	65.504	ENSCLAG00000004960	-	100	65.504	Chinchilla_lanigera
ENSXETG00000012470	frg1	99	57.874	ENSCLAG00000009263	-	100	57.480	Chinchilla_lanigera
ENSXETG00000012470	frg1	100	55.859	ENSCLAG00000006068	-	100	55.859	Chinchilla_lanigera
ENSXETG00000012470	frg1	84	78.605	ENSCSAG00000017729	-	99	78.605	Chlorocebus_sabaeus
ENSXETG00000012470	frg1	100	79.457	ENSCSAG00000002899	FRG1	100	79.845	Chlorocebus_sabaeus
ENSXETG00000012470	frg1	88	82.589	ENSCPBG00000009211	-	88	82.667	Chrysemys_picta_bellii
ENSXETG00000012470	frg1	99	49.627	ENSCING00000005161	-	99	49.064	Ciona_intestinalis
ENSXETG00000012470	frg1	68	49.180	ENSCSAVG00000008018	-	100	49.727	Ciona_savignyi
ENSXETG00000012470	frg1	100	79.457	ENSCANG00000020991	FRG1	100	79.845	Colobus_angolensis_palliatus
ENSXETG00000012470	frg1	100	79.070	ENSCGRG00001014998	Frg1	100	79.457	Cricetulus_griseus_chok1gshd
ENSXETG00000012470	frg1	100	79.070	ENSCGRG00000011860	-	100	79.457	Cricetulus_griseus_crigri
ENSXETG00000012470	frg1	100	64.981	ENSCGRG00000003902	-	96	64.981	Cricetulus_griseus_crigri
ENSXETG00000012470	frg1	96	66.122	ENSCSEG00000015950	frg1	100	67.347	Cynoglossus_semilaevis
ENSXETG00000012470	frg1	100	70.312	ENSCVAG00000009985	frg1	100	71.484	Cyprinodon_variegatus
ENSXETG00000012470	frg1	100	74.609	ENSDARG00000056504	frg1	100	74.609	Danio_rerio
ENSXETG00000012470	frg1	100	80.233	ENSDNOG00000014886	FRG1	100	80.620	Dasypus_novemcinctus
ENSXETG00000012470	frg1	100	68.992	ENSDORG00000016190	Frg1	100	70.930	Dipodomys_ordii
ENSXETG00000012470	frg1	100	48.485	FBgn0036964	FRG1	81	51.869	Drosophila_melanogaster
ENSXETG00000012470	frg1	100	77.519	ENSETEG00000012349	-	100	78.682	Echinops_telfairi
ENSXETG00000012470	frg1	59	50.000	ENSEBUG00000014053	frg1	79	49.673	Eptatretus_burgeri
ENSXETG00000012470	frg1	58	51.351	ENSEBUG00000012359	FRG1	89	51.351	Eptatretus_burgeri
ENSXETG00000012470	frg1	100	80.156	ENSEASG00005017497	FRG1	100	80.156	Equus_asinus_asinus
ENSXETG00000012470	frg1	100	80.156	ENSECAG00000003122	FRG1	100	80.156	Equus_caballus
ENSXETG00000012470	frg1	61	82.803	ENSEEUG00000000145	-	100	82.803	Erinaceus_europaeus
ENSXETG00000012470	frg1	100	70.312	ENSELUG00000021712	frg1	100	70.703	Esox_lucius
ENSXETG00000012470	frg1	100	79.070	ENSFCAG00000025737	FRG1	100	79.457	Felis_catus
ENSXETG00000012470	frg1	86	79.452	ENSFALG00000011231	-	88	78.667	Ficedula_albicollis
ENSXETG00000012470	frg1	100	70.769	ENSFDAG00000012697	-	98	77.103	Fukomys_damarensis
ENSXETG00000012470	frg1	100	81.323	ENSFDAG00000000962	-	100	81.323	Fukomys_damarensis
ENSXETG00000012470	frg1	100	68.359	ENSFHEG00000010540	frg1	100	69.531	Fundulus_heteroclitus
ENSXETG00000012470	frg1	100	67.188	ENSGMOG00000000867	frg1	100	67.188	Gadus_morhua
ENSXETG00000012470	frg1	100	78.906	ENSGALG00000013590	-	100	78.906	Gallus_gallus
ENSXETG00000012470	frg1	81	67.308	ENSGAFG00000013855	frg1	100	69.231	Gambusia_affinis
ENSXETG00000012470	frg1	100	69.922	ENSGACG00000016888	frg1	100	69.922	Gasterosteus_aculeatus
ENSXETG00000012470	frg1	100	82.422	ENSGAGG00000025012	-	100	82.422	Gopherus_agassizii
ENSXETG00000012470	frg1	100	51.751	ENSGGOG00000040796	-	100	52.529	Gorilla_gorilla
ENSXETG00000012470	frg1	68	72.989	ENSGGOG00000012888	-	88	72.989	Gorilla_gorilla
ENSXETG00000012470	frg1	100	70.312	ENSHBUG00000010667	frg1	100	70.039	Haplochromis_burtoni
ENSXETG00000012470	frg1	99	78.125	ENSHGLG00000020402	-	94	78.125	Heterocephalus_glaber_female
ENSXETG00000012470	frg1	100	67.315	ENSHGLG00000001211	-	100	68.093	Heterocephalus_glaber_female
ENSXETG00000012470	frg1	99	75.781	ENSHGLG00000020943	-	99	75.781	Heterocephalus_glaber_female
ENSXETG00000012470	frg1	100	80.934	ENSHGLG00000005601	FRG1	100	80.934	Heterocephalus_glaber_female
ENSXETG00000012470	frg1	100	67.704	ENSHGLG00100010674	-	100	68.482	Heterocephalus_glaber_male
ENSXETG00000012470	frg1	99	75.781	ENSHGLG00100021211	-	99	75.781	Heterocephalus_glaber_male
ENSXETG00000012470	frg1	100	61.868	ENSHGLG00100015285	-	100	61.089	Heterocephalus_glaber_male
ENSXETG00000012470	frg1	100	81.323	ENSHGLG00100016261	-	100	81.323	Heterocephalus_glaber_male
ENSXETG00000012470	frg1	86	70.721	ENSHCOG00000000224	frg1	94	70.721	Hippocampus_comes
ENSXETG00000012470	frg1	100	72.374	ENSIPUG00000022716	frg1	100	72.374	Ictalurus_punctatus
ENSXETG00000012470	frg1	100	78.682	ENSSTOG00000002857	-	100	78.682	Ictidomys_tridecemlineatus
ENSXETG00000012470	frg1	100	78.295	ENSJJAG00000020625	Frg1	100	79.070	Jaculus_jaculus
ENSXETG00000012470	frg1	100	69.141	ENSKMAG00000005841	frg1	100	69.141	Kryptolebias_marmoratus
ENSXETG00000012470	frg1	100	69.531	ENSLBEG00000001466	frg1	100	69.531	Labrus_bergylta
ENSXETG00000012470	frg1	100	66.284	ENSLACG00000010243	frg1	100	67.816	Latimeria_chalumnae
ENSXETG00000012470	frg1	100	76.562	ENSLOCG00000013868	frg1	100	76.562	Lepisosteus_oculatus
ENSXETG00000012470	frg1	100	78.295	ENSLAFG00000011191	FRG1	100	79.845	Loxodonta_africana
ENSXETG00000012470	frg1	100	79.457	ENSMFAG00000031178	FRG1	100	79.845	Macaca_fascicularis
ENSXETG00000012470	frg1	82	72.897	ENSMFAG00000042873	-	89	72.897	Macaca_fascicularis
ENSXETG00000012470	frg1	78	72.906	ENSMMUG00000047496	-	87	72.906	Macaca_mulatta
ENSXETG00000012470	frg1	100	79.457	ENSMMUG00000001824	FRG1	100	79.845	Macaca_mulatta
ENSXETG00000012470	frg1	96	74.494	ENSMNEG00000018620	FRG1	100	74.899	Macaca_nemestrina
ENSXETG00000012470	frg1	100	79.457	ENSMLEG00000028881	FRG1	100	79.845	Mandrillus_leucophaeus
ENSXETG00000012470	frg1	100	71.094	ENSMAMG00000012406	frg1	100	71.206	Mastacembelus_armatus
ENSXETG00000012470	frg1	100	69.922	ENSMZEG00005007549	frg1	100	69.650	Maylandia_zebra
ENSXETG00000012470	frg1	100	79.297	ENSMGAG00000011481	-	100	79.297	Meleagris_gallopavo
ENSXETG00000012470	frg1	100	79.070	ENSMAUG00000000847	Frg1	100	79.457	Mesocricetus_auratus
ENSXETG00000012470	frg1	100	79.457	ENSMICG00000046816	FRG1	100	79.845	Microcebus_murinus
ENSXETG00000012470	frg1	100	72.763	ENSMOCG00000023000	Frg1	100	73.152	Microtus_ochrogaster
ENSXETG00000012470	frg1	87	68.919	ENSMMOG00000004008	frg1	94	68.919	Mola_mola
ENSXETG00000012470	frg1	100	78.295	ENSMODG00000019031	-	87	78.295	Monodelphis_domestica
ENSXETG00000012470	frg1	100	69.922	ENSMALG00000018497	frg1	100	69.650	Monopterus_albus
ENSXETG00000012470	frg1	100	78.682	MGP_CAROLIEiJ_G0031006	Frg1	100	79.070	Mus_caroli
ENSXETG00000012470	frg1	100	78.682	ENSMUSG00000031590	Frg1	100	79.070	Mus_musculus
ENSXETG00000012470	frg1	100	78.295	MGP_PahariEiJ_G0021475	Frg1	100	78.682	Mus_pahari
ENSXETG00000012470	frg1	100	78.295	MGP_SPRETEiJ_G0032120	Frg1	100	78.682	Mus_spretus
ENSXETG00000012470	frg1	100	79.070	ENSMPUG00000017962	FRG1	100	79.457	Mustela_putorius_furo
ENSXETG00000012470	frg1	100	80.156	ENSMLUG00000023179	FRG1	100	80.156	Myotis_lucifugus
ENSXETG00000012470	frg1	100	78.682	ENSNGAG00000016411	Frg1	100	79.457	Nannospalax_galili
ENSXETG00000012470	frg1	81	66.827	ENSNBRG00000006806	frg1	95	66.346	Neolamprologus_brichardi
ENSXETG00000012470	frg1	100	67.954	ENSNLEG00000032333	-	100	67.954	Nomascus_leucogenys
ENSXETG00000012470	frg1	100	80.156	ENSNLEG00000000930	FRG1	100	80.156	Nomascus_leucogenys
ENSXETG00000012470	frg1	78	74.129	ENSNLEG00000028874	-	91	74.129	Nomascus_leucogenys
ENSXETG00000012470	frg1	100	67.816	ENSNLEG00000035849	-	100	67.816	Nomascus_leucogenys
ENSXETG00000012470	frg1	78	74.627	ENSNLEG00000036059	-	86	74.627	Nomascus_leucogenys
ENSXETG00000012470	frg1	100	54.864	ENSNLEG00000032846	-	100	70.536	Nomascus_leucogenys
ENSXETG00000012470	frg1	59	80.921	ENSMEUG00000007509	-	59	80.921	Notamacropus_eugenii
ENSXETG00000012470	frg1	100	66.537	ENSOPRG00000004722	-	100	66.537	Ochotona_princeps
ENSXETG00000012470	frg1	100	80.545	ENSODEG00000006458	-	100	80.545	Octodon_degus
ENSXETG00000012470	frg1	100	61.479	ENSODEG00000006953	-	100	60.700	Octodon_degus
ENSXETG00000012470	frg1	100	70.039	ENSONIG00000010162	frg1	100	69.767	Oreochromis_niloticus
ENSXETG00000012470	frg1	77	71.287	ENSOANG00000005659	-	90	71.287	Ornithorhynchus_anatinus
ENSXETG00000012470	frg1	100	79.457	ENSOCUG00000009038	-	100	80.233	Oryctolagus_cuniculus
ENSXETG00000012470	frg1	96	71.020	ENSORLG00000008106	frg1	89	71.020	Oryzias_latipes
ENSXETG00000012470	frg1	100	71.875	ENSORLG00020014355	frg1	100	71.875	Oryzias_latipes_hni
ENSXETG00000012470	frg1	100	71.875	ENSORLG00015014159	frg1	100	71.875	Oryzias_latipes_hsok
ENSXETG00000012470	frg1	84	71.028	ENSOMEG00000002468	frg1	88	71.028	Oryzias_melastigma
ENSXETG00000012470	frg1	100	79.457	ENSOGAG00000005749	-	100	78.295	Otolemur_garnettii
ENSXETG00000012470	frg1	100	77.011	ENSOARG00000008592	FRG1	100	77.395	Ovis_aries
ENSXETG00000012470	frg1	96	58.915	ENSPPAG00000043174	-	100	58.915	Pan_paniscus
ENSXETG00000012470	frg1	84	78.241	ENSPPAG00000043170	-	100	79.167	Pan_paniscus
ENSXETG00000012470	frg1	100	78.210	ENSPPRG00000019777	-	100	78.210	Panthera_pardus
ENSXETG00000012470	frg1	100	78.682	ENSPPRG00000025003	-	100	79.070	Panthera_pardus
ENSXETG00000012470	frg1	100	79.070	ENSPTIG00000006588	-	100	79.457	Panthera_tigris_altaica
ENSXETG00000012470	frg1	100	78.599	ENSPTIG00000006566	-	100	78.599	Panthera_tigris_altaica
ENSXETG00000012470	frg1	96	64.919	ENSPTRG00000044710	-	100	64.919	Pan_troglodytes
ENSXETG00000012470	frg1	95	64.344	ENSPTRG00000052363	-	97	71.154	Pan_troglodytes
ENSXETG00000012470	frg1	89	67.532	ENSPTRG00000043123	-	94	66.524	Pan_troglodytes
ENSXETG00000012470	frg1	100	79.457	ENSPTRG00000050205	-	100	80.233	Pan_troglodytes
ENSXETG00000012470	frg1	96	64.113	ENSPTRG00000050204	-	100	64.113	Pan_troglodytes
ENSXETG00000012470	frg1	100	79.457	ENSPTRG00000016671	-	100	80.233	Pan_troglodytes
ENSXETG00000012470	frg1	70	71.667	ENSPANG00000031530	-	84	72.222	Papio_anubis
ENSXETG00000012470	frg1	100	66.797	ENSPKIG00000024189	frg1	100	66.797	Paramormyrops_kingsleyae
ENSXETG00000012470	frg1	84	82.791	ENSPSIG00000017971	-	82	82.791	Pelodiscus_sinensis
ENSXETG00000012470	frg1	98	65.200	ENSPMGG00000019273	frg1	100	64.800	Periophthalmus_magnuspinnatus
ENSXETG00000012470	frg1	100	78.682	ENSPEMG00000000650	Frg1	100	79.457	Peromyscus_maniculatus_bairdii
ENSXETG00000012470	frg1	100	78.295	ENSPCIG00000007530	-	69	78.295	Phascolarctos_cinereus
ENSXETG00000012470	frg1	100	68.750	ENSPFOG00000006721	frg1	100	69.922	Poecilia_formosa
ENSXETG00000012470	frg1	100	69.141	ENSPMEG00000013816	frg1	100	70.312	Poecilia_mexicana
ENSXETG00000012470	frg1	100	68.750	ENSPREG00000000097	frg1	100	69.922	Poecilia_reticulata
ENSXETG00000012470	frg1	56	82.069	ENSPPYG00000029810	-	100	82.069	Pongo_abelii
ENSXETG00000012470	frg1	62	77.848	ENSPPYG00000011275	-	87	77.848	Pongo_abelii
ENSXETG00000012470	frg1	95	78.049	ENSPCAG00000014953	-	100	76.829	Procavia_capensis
ENSXETG00000012470	frg1	79	63.547	ENSPCOG00000022726	FRG1	94	64.039	Propithecus_coquereli
ENSXETG00000012470	frg1	100	65.504	ENSPVAG00000010551	FRG1	100	65.504	Pteropus_vampyrus
ENSXETG00000012470	frg1	67	70.930	ENSPNYG00000015209	frg1	74	70.930	Pundamilia_nyererei
ENSXETG00000012470	frg1	100	70.312	ENSPNAG00000013259	frg1	100	69.531	Pygocentrus_nattereri
ENSXETG00000012470	frg1	100	77.907	ENSRNOG00000009846	Frg1	100	78.295	Rattus_norvegicus
ENSXETG00000012470	frg1	87	78.571	ENSRBIG00000042219	-	94	79.018	Rhinopithecus_bieti
ENSXETG00000012470	frg1	82	75.829	ENSRROG00000032084	-	88	75.829	Rhinopithecus_roxellana
ENSXETG00000012470	frg1	100	76.744	ENSRROG00000015523	FRG1	100	77.132	Rhinopithecus_roxellana
ENSXETG00000012470	frg1	100	80.934	ENSSBOG00000034175	FRG1	100	80.934	Saimiri_boliviensis_boliviensis
ENSXETG00000012470	frg1	100	77.132	ENSSHAG00000005886	-	100	78.295	Sarcophilus_harrisii
ENSXETG00000012470	frg1	97	67.742	ENSSFOG00015021361	frg1	99	67.742	Scleropages_formosus
ENSXETG00000012470	frg1	100	72.266	ENSSMAG00000001213	frg1	100	72.374	Scophthalmus_maximus
ENSXETG00000012470	frg1	100	71.484	ENSSDUG00000018886	frg1	100	71.206	Seriola_dumerili
ENSXETG00000012470	frg1	100	71.094	ENSSLDG00000024191	frg1	100	70.817	Seriola_lalandi_dorsalis
ENSXETG00000012470	frg1	66	81.176	ENSSARG00000002471	-	94	80.226	Sorex_araneus
ENSXETG00000012470	frg1	100	75.391	ENSSPUG00000017326	-	99	77.103	Sphenodon_punctatus
ENSXETG00000012470	frg1	100	67.704	ENSSPAG00000013294	frg1	100	66.797	Stegastes_partitus
ENSXETG00000012470	frg1	100	79.457	ENSSSCG00000006996	FRG1	100	79.845	Sus_scrofa
ENSXETG00000012470	frg1	100	79.297	ENSTGUG00000007028	-	100	79.297	Taeniopygia_guttata
ENSXETG00000012470	frg1	100	69.922	ENSTRUG00000016208	frg1	100	69.650	Takifugu_rubripes
ENSXETG00000012470	frg1	100	67.704	ENSTNIG00000007128	frg1	100	68.872	Tetraodon_nigroviridis
ENSXETG00000012470	frg1	100	77.519	ENSTBEG00000014491	-	100	78.295	Tupaia_belangeri
ENSXETG00000012470	frg1	82	58.294	ENSTBEG00000012789	-	99	58.294	Tupaia_belangeri
ENSXETG00000012470	frg1	77	54.545	ENSTBEG00000017605	-	99	54.545	Tupaia_belangeri
ENSXETG00000012470	frg1	100	78.682	ENSTTRG00000003429	FRG1	100	79.070	Tursiops_truncatus
ENSXETG00000012470	frg1	96	76.113	ENSUAMG00000012123	-	100	75.203	Ursus_americanus
ENSXETG00000012470	frg1	100	79.070	ENSUMAG00000021119	FRG1	100	79.457	Ursus_maritimus
ENSXETG00000012470	frg1	100	77.132	ENSVPAG00000000616	FRG1	100	77.132	Vicugna_pacos
ENSXETG00000012470	frg1	88	80.444	ENSVPAG00000011977	-	95	80.531	Vicugna_pacos
ENSXETG00000012470	frg1	82	83.019	ENSVVUG00000007181	-	77	83.019	Vulpes_vulpes
ENSXETG00000012470	frg1	100	65.234	ENSXCOG00000005312	frg1	100	64.453	Xiphophorus_couchianus
ENSXETG00000012470	frg1	100	68.359	ENSXMAG00000007751	frg1	100	69.531	Xiphophorus_maculatus