EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000012532 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: -
Full Name: Xenopus tropicalis tRNA splicing endonuclease subunit 54 (tsen54)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12382 bases
Position: chrGL173181.1:308497-320878
Accession: NM_001102898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000064107	tRNA_int_end_N2	PF12928.7	8.3e-20	1	1
ENSXETP00000027421	tRNA_int_end_N2	PF12928.7	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000027421	-	1774	-	ENSXETP00000027421	513 (aa)	-	F7BK39
ENSXETT00000064438	-	1088	-	ENSXETP00000064107	232 (aa)	-	F6Y1U0

Gene Model

Click here to download ENSXETG00000012532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000012532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000012532	tsen54	99	68.333	ENSG00000182173	TSEN54	99	67.857	Homo_sapiens
ENSXETG00000012532	tsen54	100	62.500	ENSAPOG00000009659	tsen54	100	44.601	Acanthochromis_polyacanthus
ENSXETG00000012532	tsen54	98	60.959	ENSAMEG00000009414	TSEN54	96	48.842	Ailuropoda_melanoleuca
ENSXETG00000012532	tsen54	100	61.667	ENSAOCG00000000152	tsen54	95	45.898	Amphiprion_ocellaris
ENSXETG00000012532	tsen54	100	62.500	ENSAPEG00000018931	tsen54	95	45.898	Amphiprion_percula
ENSXETG00000012532	tsen54	100	59.649	ENSATEG00000019860	tsen54	97	42.015	Anabas_testudineus
ENSXETG00000012532	tsen54	74	69.355	ENSAPLG00000009419	TSEN54	99	49.007	Anas_platyrhynchos
ENSXETG00000012532	tsen54	100	65.248	ENSACAG00000006714	TSEN54	98	52.794	Anolis_carolinensis
ENSXETG00000012532	tsen54	99	68.333	ENSANAG00000024061	TSEN54	97	50.191	Aotus_nancymaae
ENSXETG00000012532	tsen54	100	62.500	ENSACLG00000019800	tsen54	97	44.942	Astatotilapia_calliptera
ENSXETG00000012532	tsen54	99	64.167	ENSAMXG00000006546	tsen54	96	46.800	Astyanax_mexicanus
ENSXETG00000012532	tsen54	99	71.667	ENSBTAG00000000824	TSEN54	99	48.972	Bos_taurus
ENSXETG00000012532	tsen54	99	68.333	ENSCJAG00000014278	TSEN54	97	49.423	Callithrix_jacchus
ENSXETG00000012532	tsen54	99	70.000	ENSCAFG00000004798	TSEN54	98	50.000	Canis_familiaris
ENSXETG00000012532	tsen54	99	70.000	ENSCAFG00020000312	TSEN54	98	50.000	Canis_lupus_dingo
ENSXETG00000012532	tsen54	98	70.833	ENSCHIG00000019908	TSEN54	99	48.767	Capra_hircus
ENSXETG00000012532	tsen54	74	69.355	ENSTSYG00000037439	TSEN54	99	47.265	Carlito_syrichta
ENSXETG00000012532	tsen54	99	67.500	ENSCCAG00000036624	TSEN54	97	50.191	Cebus_capucinus
ENSXETG00000012532	tsen54	99	68.333	ENSCATG00000042877	TSEN54	98	50.000	Cercocebus_atys
ENSXETG00000012532	tsen54	99	70.833	ENSCLAG00000002924	TSEN54	99	48.582	Chinchilla_lanigera
ENSXETG00000012532	tsen54	99	67.500	ENSCSAG00000004809	TSEN54	98	49.904	Chlorocebus_sabaeus
ENSXETG00000012532	tsen54	99	68.333	ENSCPBG00000028071	TSEN54	98	49.718	Chrysemys_picta_bellii
ENSXETG00000012532	tsen54	99	68.333	ENSCANG00000028053	TSEN54	98	49.808	Colobus_angolensis_palliatus
ENSXETG00000012532	tsen54	99	70.833	ENSCGRG00001020029	Tsen54	98	49.806	Cricetulus_griseus_chok1gshd
ENSXETG00000012532	tsen54	70	69.811	ENSCGRG00000016289	Tsen54	99	46.622	Cricetulus_griseus_crigri
ENSXETG00000012532	tsen54	63	62.857	ENSCSEG00000020586	tsen54	99	39.720	Cynoglossus_semilaevis
ENSXETG00000012532	tsen54	50	60.000	ENSCVAG00000006741	-	77	51.485	Cyprinodon_variegatus
ENSXETG00000012532	tsen54	63	65.714	ENSDARG00000036844	tsen54	100	44.153	Danio_rerio
ENSXETG00000012532	tsen54	99	70.833	ENSDNOG00000018452	TSEN54	98	49.715	Dasypus_novemcinctus
ENSXETG00000012532	tsen54	99	70.000	ENSDORG00000004073	Tsen54	99	48.593	Dipodomys_ordii
ENSXETG00000012532	tsen54	79	58.491	ENSEBUG00000005203	TSEN54	95	33.948	Eptatretus_burgeri
ENSXETG00000012532	tsen54	99	71.667	ENSEASG00005000579	TSEN54	98	50.286	Equus_asinus_asinus
ENSXETG00000012532	tsen54	99	71.667	ENSECAG00000004924	TSEN54	98	49.618	Equus_caballus
ENSXETG00000012532	tsen54	74	70.968	ENSEEUG00000008467	TSEN54	99	46.104	Erinaceus_europaeus
ENSXETG00000012532	tsen54	99	61.667	ENSELUG00000017703	tsen54	90	44.234	Esox_lucius
ENSXETG00000012532	tsen54	99	70.000	ENSFCAG00000023712	TSEN54	99	48.790	Felis_catus
ENSXETG00000012532	tsen54	93	64.151	ENSFALG00000001119	TSEN54	94	49.197	Ficedula_albicollis
ENSXETG00000012532	tsen54	74	69.355	ENSFDAG00000019090	TSEN54	99	46.799	Fukomys_damarensis
ENSXETG00000012532	tsen54	100	60.000	ENSFHEG00000005470	tsen54	97	46.918	Fundulus_heteroclitus
ENSXETG00000012532	tsen54	98	43.750	ENSGMOG00000013146	tsen54	99	39.256	Gadus_morhua
ENSXETG00000012532	tsen54	91	67.327	ENSGALG00000047163	TSEN54	96	50.302	Gallus_gallus
ENSXETG00000012532	tsen54	100	61.667	ENSGAFG00000005111	tsen54	97	45.988	Gambusia_affinis
ENSXETG00000012532	tsen54	99	60.000	ENSGACG00000014987	tsen54	100	42.970	Gasterosteus_aculeatus
ENSXETG00000012532	tsen54	99	69.167	ENSGAGG00000006825	TSEN54	96	51.257	Gopherus_agassizii
ENSXETG00000012532	tsen54	98	68.644	ENSGGOG00000009417	TSEN54	99	50.195	Gorilla_gorilla
ENSXETG00000012532	tsen54	78	62.500	ENSHBUG00000018296	tsen54	88	43.844	Haplochromis_burtoni
ENSXETG00000012532	tsen54	99	70.833	ENSHGLG00000007979	TSEN54	99	49.341	Heterocephalus_glaber_female
ENSXETG00000012532	tsen54	99	66.667	ENSHGLG00100005497	TSEN54	99	48.399	Heterocephalus_glaber_male
ENSXETG00000012532	tsen54	63	68.571	ENSHCOG00000007481	tsen54	100	40.714	Hippocampus_comes
ENSXETG00000012532	tsen54	99	41.259	ENSIPUG00000000590	tsen54	96	41.602	Ictalurus_punctatus
ENSXETG00000012532	tsen54	99	70.000	ENSSTOG00000012883	TSEN54	99	48.684	Ictidomys_tridecemlineatus
ENSXETG00000012532	tsen54	99	71.667	ENSJJAG00000007365	Tsen54	98	48.485	Jaculus_jaculus
ENSXETG00000012532	tsen54	100	61.667	ENSKMAG00000006944	tsen54	97	44.821	Kryptolebias_marmoratus
ENSXETG00000012532	tsen54	100	60.000	ENSLBEG00000004199	tsen54	97	42.690	Labrus_bergylta
ENSXETG00000012532	tsen54	99	54.730	ENSLACG00000009497	TSEN54	99	45.333	Latimeria_chalumnae
ENSXETG00000012532	tsen54	98	65.833	ENSLOCG00000011191	tsen54	96	46.718	Lepisosteus_oculatus
ENSXETG00000012532	tsen54	89	73.958	ENSLAFG00000011655	TSEN54	92	49.190	Loxodonta_africana
ENSXETG00000012532	tsen54	99	68.333	ENSMFAG00000000712	TSEN54	98	50.192	Macaca_fascicularis
ENSXETG00000012532	tsen54	99	68.333	ENSMNEG00000029199	TSEN54	98	50.192	Macaca_nemestrina
ENSXETG00000012532	tsen54	74	67.742	ENSMLEG00000044168	TSEN54	88	47.702	Mandrillus_leucophaeus
ENSXETG00000012532	tsen54	99	62.069	ENSMAMG00000019773	tsen54	97	44.618	Mastacembelus_armatus
ENSXETG00000012532	tsen54	100	62.500	ENSMZEG00005000884	tsen54	97	44.639	Maylandia_zebra
ENSXETG00000012532	tsen54	97	61.207	ENSMGAG00000009556	TSEN54	93	49.501	Meleagris_gallopavo
ENSXETG00000012532	tsen54	99	71.667	ENSMAUG00000016838	Tsen54	98	49.425	Mesocricetus_auratus
ENSXETG00000012532	tsen54	99	61.486	ENSMICG00000044012	TSEN54	99	50.965	Microcebus_murinus
ENSXETG00000012532	tsen54	99	70.833	ENSMOCG00000021585	Tsen54	98	49.611	Microtus_ochrogaster
ENSXETG00000012532	tsen54	99	61.538	ENSMMOG00000020189	tsen54	99	41.153	Mola_mola
ENSXETG00000012532	tsen54	99	65.833	ENSMODG00000007438	TSEN54	96	48.872	Monodelphis_domestica
ENSXETG00000012532	tsen54	99	65.000	ENSMALG00000020573	tsen54	97	46.199	Monopterus_albus
ENSXETG00000012532	tsen54	99	71.667	MGP_CAROLIEiJ_G0017417	Tsen54	99	49.341	Mus_caroli
ENSXETG00000012532	tsen54	99	70.833	ENSMUSG00000020781	Tsen54	99	49.341	Mus_musculus
ENSXETG00000012532	tsen54	99	71.667	MGP_PahariEiJ_G0018547	Tsen54	99	49.153	Mus_pahari
ENSXETG00000012532	tsen54	99	70.833	MGP_SPRETEiJ_G0018262	Tsen54	99	49.341	Mus_spretus
ENSXETG00000012532	tsen54	99	59.459	ENSMPUG00000013870	TSEN54	98	47.810	Mustela_putorius_furo
ENSXETG00000012532	tsen54	99	66.667	ENSMLUG00000015298	TSEN54	99	47.793	Myotis_lucifugus
ENSXETG00000012532	tsen54	99	72.500	ENSNGAG00000015673	Tsen54	99	49.153	Nannospalax_galili
ENSXETG00000012532	tsen54	80	64.474	ENSMEUG00000011908	TSEN54	99	44.351	Notamacropus_eugenii
ENSXETG00000012532	tsen54	99	67.500	ENSOPRG00000012513	TSEN54	99	45.920	Ochotona_princeps
ENSXETG00000012532	tsen54	100	63.333	ENSONIG00000009543	tsen54	97	45.331	Oreochromis_niloticus
ENSXETG00000012532	tsen54	99	63.281	ENSOCUG00000009875	TSEN54	99	46.468	Oryctolagus_cuniculus
ENSXETG00000012532	tsen54	100	62.500	ENSORLG00000000852	tsen54	97	46.016	Oryzias_latipes
ENSXETG00000012532	tsen54	100	63.333	ENSORLG00020018221	tsen54	97	46.215	Oryzias_latipes_hni
ENSXETG00000012532	tsen54	100	62.500	ENSORLG00015009413	tsen54	98	44.711	Oryzias_latipes_hsok
ENSXETG00000012532	tsen54	100	61.667	ENSOMEG00000014402	tsen54	94	46.108	Oryzias_melastigma
ENSXETG00000012532	tsen54	99	70.000	ENSOGAG00000001442	TSEN54	99	46.212	Otolemur_garnettii
ENSXETG00000012532	tsen54	74	62.903	ENSOARG00000010361	TSEN54	99	45.316	Ovis_aries
ENSXETG00000012532	tsen54	93	67.925	ENSPPAG00000043519	TSEN54	99	49.699	Pan_paniscus
ENSXETG00000012532	tsen54	99	70.000	ENSPPRG00000009162	TSEN54	99	49.162	Panthera_pardus
ENSXETG00000012532	tsen54	74	67.742	ENSPTIG00000019312	TSEN54	96	47.277	Panthera_tigris_altaica
ENSXETG00000012532	tsen54	99	68.333	ENSPTRG00000009646	TSEN54	99	49.529	Pan_troglodytes
ENSXETG00000012532	tsen54	99	67.500	ENSPANG00000020133	TSEN54	97	50.000	Papio_anubis
ENSXETG00000012532	tsen54	99	44.776	ENSPKIG00000023018	tsen54	99	44.028	Paramormyrops_kingsleyae
ENSXETG00000012532	tsen54	63	77.143	ENSPSIG00000012807	TSEN54	100	47.045	Pelodiscus_sinensis
ENSXETG00000012532	tsen54	75	67.021	ENSPMGG00000019578	tsen54	99	36.875	Periophthalmus_magnuspinnatus
ENSXETG00000012532	tsen54	99	71.667	ENSPEMG00000014857	Tsen54	98	50.000	Peromyscus_maniculatus_bairdii
ENSXETG00000012532	tsen54	100	62.500	ENSPFOG00000022740	tsen54	97	46.507	Poecilia_formosa
ENSXETG00000012532	tsen54	100	62.500	ENSPLAG00000014847	tsen54	97	46.600	Poecilia_latipinna
ENSXETG00000012532	tsen54	100	62.500	ENSPMEG00000022876	tsen54	97	46.400	Poecilia_mexicana
ENSXETG00000012532	tsen54	100	62.500	ENSPREG00000013090	tsen54	97	45.817	Poecilia_reticulata
ENSXETG00000012532	tsen54	86	67.416	ENSPPYG00000008629	TSEN54	99	49.045	Pongo_abelii
ENSXETG00000012532	tsen54	89	68.333	ENSPCAG00000002093	TSEN54	97	44.177	Procavia_capensis
ENSXETG00000012532	tsen54	99	61.486	ENSPCOG00000027880	TSEN54	98	50.577	Propithecus_coquereli
ENSXETG00000012532	tsen54	99	71.667	ENSPVAG00000008446	TSEN54	98	48.762	Pteropus_vampyrus
ENSXETG00000012532	tsen54	91	62.626	ENSPNYG00000010217	tsen54	99	44.378	Pundamilia_nyererei
ENSXETG00000012532	tsen54	99	62.500	ENSPNAG00000003770	tsen54	97	45.489	Pygocentrus_nattereri
ENSXETG00000012532	tsen54	99	71.667	ENSRNOG00000004598	Tsen54	98	49.427	Rattus_norvegicus
ENSXETG00000012532	tsen54	99	67.500	ENSRBIG00000043040	TSEN54	98	49.808	Rhinopithecus_bieti
ENSXETG00000012532	tsen54	99	67.500	ENSRROG00000030797	TSEN54	98	49.808	Rhinopithecus_roxellana
ENSXETG00000012532	tsen54	99	68.333	ENSSBOG00000013543	TSEN54	97	47.137	Saimiri_boliviensis_boliviensis
ENSXETG00000012532	tsen54	99	61.314	ENSSHAG00000018127	TSEN54	97	47.655	Sarcophilus_harrisii
ENSXETG00000012532	tsen54	63	65.714	ENSSFOG00015004093	tsen54	99	44.213	Scleropages_formosus
ENSXETG00000012532	tsen54	99	51.829	ENSSMAG00000012449	tsen54	99	43.595	Scophthalmus_maximus
ENSXETG00000012532	tsen54	100	60.000	ENSSDUG00000021506	tsen54	97	46.050	Seriola_dumerili
ENSXETG00000012532	tsen54	100	60.000	ENSSLDG00000016303	tsen54	97	46.109	Seriola_lalandi_dorsalis
ENSXETG00000012532	tsen54	78	47.552	ENSSPUG00000008988	TSEN54	99	46.861	Sphenodon_punctatus
ENSXETG00000012532	tsen54	91	61.224	ENSSPAG00000008098	-	99	45.868	Stegastes_partitus
ENSXETG00000012532	tsen54	63	62.857	ENSSPAG00000008047	tsen54	100	41.587	Stegastes_partitus
ENSXETG00000012532	tsen54	99	70.833	ENSSSCG00000036852	TSEN54	98	49.522	Sus_scrofa
ENSXETG00000012532	tsen54	74	70.968	ENSTGUG00000008548	TSEN54	99	50.220	Taeniopygia_guttata
ENSXETG00000012532	tsen54	99	61.207	ENSTRUG00000004230	tsen54	97	45.618	Takifugu_rubripes
ENSXETG00000012532	tsen54	97	64.912	ENSTNIG00000011281	tsen54	99	44.510	Tetraodon_nigroviridis
ENSXETG00000012532	tsen54	74	64.516	ENSTTRG00000015828	TSEN54	99	45.788	Tursiops_truncatus
ENSXETG00000012532	tsen54	80	44.138	ENSUAMG00000010045	TSEN54	99	44.138	Ursus_americanus
ENSXETG00000012532	tsen54	82	44.098	ENSUMAG00000008979	TSEN54	99	45.212	Ursus_maritimus
ENSXETG00000012532	tsen54	97	71.304	ENSVVUG00000011411	TSEN54	98	49.903	Vulpes_vulpes
ENSXETG00000012532	tsen54	99	60.000	ENSXCOG00000018245	tsen54	100	42.206	Xiphophorus_couchianus
ENSXETG00000012532	tsen54	100	61.667	ENSXMAG00000018818	tsen54	97	46.600	Xiphophorus_maculatus