EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000012644 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 21072 bases
Position: chrGL172862.1:792146-813217
Accession: XB-GENE-491800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060479	dsrm	PF00035.26	1.1e-34	1	2
ENSXETP00000060479	dsrm	PF00035.26	1.1e-34	2	2
ENSXETP00000027677	dsrm	PF00035.26	1.6e-34	1	2
ENSXETP00000027677	dsrm	PF00035.26	1.6e-34	2	2
ENSXETP00000027677	DND1_DSRM	PF14709.7	3.8e-13	1	1
ENSXETP00000060479	DND1_DSRM	PF14709.7	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000027677	-	1084	-	ENSXETP00000027677	351 (aa)	-	F7BIK9
ENSXETT00000062760	-	1126	-	ENSXETP00000060479	365 (aa)	-	F7C876

Gene Model

Click here to download ENSXETG00000012644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000012644's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000012644	tarbp2	97	70.391	ENSG00000139546	TARBP2	99	81.609	Homo_sapiens
ENSXETG00000012644	tarbp2	97	70.058	ENSAPOG00000019892	tarbp2	97	69.767	Acanthochromis_polyacanthus
ENSXETG00000012644	tarbp2	97	69.382	ENSAMEG00000012601	TARBP2	97	69.944	Ailuropoda_melanoleuca
ENSXETG00000012644	tarbp2	97	69.477	ENSACIG00000016780	tarbp2	96	69.477	Amphilophus_citrinellus
ENSXETG00000012644	tarbp2	97	70.349	ENSAOCG00000005201	tarbp2	97	70.058	Amphiprion_ocellaris
ENSXETG00000012644	tarbp2	97	70.349	ENSAPEG00000008376	tarbp2	97	70.058	Amphiprion_percula
ENSXETG00000012644	tarbp2	97	70.058	ENSATEG00000025012	tarbp2	97	70.640	Anabas_testudineus
ENSXETG00000012644	tarbp2	98	74.033	ENSACAG00000001100	TARBP2	98	74.033	Anolis_carolinensis
ENSXETG00000012644	tarbp2	97	69.553	ENSANAG00000034453	TARBP2	97	70.752	Aotus_nancymaae
ENSXETG00000012644	tarbp2	95	69.027	ENSACLG00000018569	tarbp2	95	69.322	Astatotilapia_calliptera
ENSXETG00000012644	tarbp2	98	69.364	ENSAMXG00000016665	tarbp2	98	70.809	Astyanax_mexicanus
ENSXETG00000012644	tarbp2	97	69.382	ENSBTAG00000000435	TARBP2	97	70.752	Bos_taurus
ENSXETG00000012644	tarbp2	97	69.553	ENSCJAG00000018668	TARBP2	97	71.031	Callithrix_jacchus
ENSXETG00000012644	tarbp2	97	70.029	ENSCAFG00000006874	TARBP2	97	70.195	Canis_familiaris
ENSXETG00000012644	tarbp2	97	70.670	ENSCAFG00020020735	TARBP2	100	71.060	Canis_lupus_dingo
ENSXETG00000012644	tarbp2	97	68.802	ENSCHIG00000026017	TARBP2	97	69.359	Capra_hircus
ENSXETG00000012644	tarbp2	97	70.670	ENSTSYG00000035683	TARBP2	97	71.031	Carlito_syrichta
ENSXETG00000012644	tarbp2	62	74.324	ENSCAPG00000008981	TARBP2	99	74.324	Cavia_aperea
ENSXETG00000012644	tarbp2	97	70.787	ENSCPOG00000001009	TARBP2	97	70.787	Cavia_porcellus
ENSXETG00000012644	tarbp2	97	68.994	ENSCCAG00000033025	TARBP2	91	88.679	Cebus_capucinus
ENSXETG00000012644	tarbp2	97	69.916	ENSCATG00000026344	TARBP2	97	70.752	Cercocebus_atys
ENSXETG00000012644	tarbp2	97	70.506	ENSCLAG00000009175	TARBP2	97	70.506	Chinchilla_lanigera
ENSXETG00000012644	tarbp2	97	70.112	ENSCSAG00000005479	TARBP2	97	70.474	Chlorocebus_sabaeus
ENSXETG00000012644	tarbp2	100	75.000	ENSCPBG00000000654	TARBP2	100	76.106	Chrysemys_picta_bellii
ENSXETG00000012644	tarbp2	97	70.112	ENSCANG00000040415	TARBP2	91	88.679	Colobus_angolensis_palliatus
ENSXETG00000012644	tarbp2	97	70.506	ENSCGRG00001011856	TARBP2	97	70.787	Cricetulus_griseus_chok1gshd
ENSXETG00000012644	tarbp2	97	70.506	ENSCGRG00000009088	TARBP2	100	70.612	Cricetulus_griseus_crigri
ENSXETG00000012644	tarbp2	99	69.688	ENSCSEG00000010631	tarbp2	98	69.886	Cynoglossus_semilaevis
ENSXETG00000012644	tarbp2	97	70.930	ENSCVAG00000009832	tarbp2	97	70.930	Cyprinodon_variegatus
ENSXETG00000012644	tarbp2	97	70.402	ENSDARG00000070471	tarbp2	97	70.286	Danio_rerio
ENSXETG00000012644	tarbp2	97	69.944	ENSDNOG00000002144	TARBP2	97	70.225	Dasypus_novemcinctus
ENSXETG00000012644	tarbp2	63	72.124	ENSDORG00000001390	Tarbp2	93	72.124	Dipodomys_ordii
ENSXETG00000012644	tarbp2	83	78.351	ENSETEG00000002458	TARBP2	81	78.351	Echinops_telfairi
ENSXETG00000012644	tarbp2	96	56.637	ENSEBUG00000002377	tarbp2	99	57.522	Eptatretus_burgeri
ENSXETG00000012644	tarbp2	97	70.225	ENSEASG00005010030	TARBP2	97	71.031	Equus_asinus_asinus
ENSXETG00000012644	tarbp2	97	70.690	ENSECAG00000011695	TARBP2	97	70.690	Equus_caballus
ENSXETG00000012644	tarbp2	82	64.286	ENSEEUG00000001128	-	96	64.286	Erinaceus_europaeus
ENSXETG00000012644	tarbp2	99	68.466	ENSELUG00000010642	tarbp2	98	70.141	Esox_lucius
ENSXETG00000012644	tarbp2	97	70.391	ENSFCAG00000007757	TARBP2	97	70.752	Felis_catus
ENSXETG00000012644	tarbp2	97	70.787	ENSFDAG00000011932	TARBP2	100	70.612	Fukomys_damarensis
ENSXETG00000012644	tarbp2	94	70.746	ENSFHEG00000016118	tarbp2	100	70.746	Fundulus_heteroclitus
ENSXETG00000012644	tarbp2	97	69.828	ENSGMOG00000001290	tarbp2	97	69.828	Gadus_morhua
ENSXETG00000012644	tarbp2	62	75.688	ENSGALG00000038939	-	83	75.799	Gallus_gallus
ENSXETG00000012644	tarbp2	97	70.809	ENSGAFG00000013341	tarbp2	97	70.809	Gambusia_affinis
ENSXETG00000012644	tarbp2	97	68.661	ENSGACG00000006645	tarbp2	97	71.098	Gasterosteus_aculeatus
ENSXETG00000012644	tarbp2	99	75.070	ENSGAGG00000021169	TARBP2	99	75.070	Gopherus_agassizii
ENSXETG00000012644	tarbp2	97	70.112	ENSGGOG00000012637	TARBP2	97	70.474	Gorilla_gorilla
ENSXETG00000012644	tarbp2	97	68.605	ENSHBUG00000018639	tarbp2	97	68.895	Haplochromis_burtoni
ENSXETG00000012644	tarbp2	97	70.225	ENSHGLG00000001284	TARBP2	97	70.225	Heterocephalus_glaber_female
ENSXETG00000012644	tarbp2	97	70.225	ENSHGLG00100011274	TARBP2	97	70.225	Heterocephalus_glaber_male
ENSXETG00000012644	tarbp2	97	67.733	ENSHCOG00000001027	tarbp2	97	67.919	Hippocampus_comes
ENSXETG00000012644	tarbp2	98	69.653	ENSIPUG00000023701	tarbp2	94	71.302	Ictalurus_punctatus
ENSXETG00000012644	tarbp2	97	69.553	ENSSTOG00000003678	TARBP2	100	71.020	Ictidomys_tridecemlineatus
ENSXETG00000012644	tarbp2	97	70.930	ENSKMAG00000012142	tarbp2	97	70.930	Kryptolebias_marmoratus
ENSXETG00000012644	tarbp2	97	70.930	ENSLBEG00000015027	tarbp2	97	71.091	Labrus_bergylta
ENSXETG00000012644	tarbp2	70	93.103	ENSLACG00000007087	TARBP2	95	64.058	Latimeria_chalumnae
ENSXETG00000012644	tarbp2	97	73.178	ENSLOCG00000005711	tarbp2	97	73.178	Lepisosteus_oculatus
ENSXETG00000012644	tarbp2	74	65.217	ENSLAFG00000002620	TARBP2	94	65.217	Loxodonta_africana
ENSXETG00000012644	tarbp2	97	69.916	ENSMFAG00000013567	TARBP2	97	70.752	Macaca_fascicularis
ENSXETG00000012644	tarbp2	97	70.670	ENSMMUG00000018492	TARBP2	97	71.031	Macaca_mulatta
ENSXETG00000012644	tarbp2	97	69.916	ENSMNEG00000036477	TARBP2	97	70.752	Macaca_nemestrina
ENSXETG00000012644	tarbp2	97	69.916	ENSMLEG00000029583	TARBP2	97	70.752	Mandrillus_leucophaeus
ENSXETG00000012644	tarbp2	95	69.822	ENSMAMG00000010272	tarbp2	97	70.845	Mastacembelus_armatus
ENSXETG00000012644	tarbp2	97	68.605	ENSMZEG00005006895	tarbp2	97	68.895	Maylandia_zebra
ENSXETG00000012644	tarbp2	97	70.339	ENSMAUG00000019805	Tarbp2	97	70.621	Mesocricetus_auratus
ENSXETG00000012644	tarbp2	95	70.977	ENSMICG00000027441	TARBP2	100	71.347	Microcebus_murinus
ENSXETG00000012644	tarbp2	97	70.787	ENSMOCG00000003691	Tarbp2	97	70.787	Microtus_ochrogaster
ENSXETG00000012644	tarbp2	95	67.919	ENSMMOG00000010374	tarbp2	100	70.206	Mola_mola
ENSXETG00000012644	tarbp2	97	69.186	ENSMALG00000009773	tarbp2	97	69.477	Monopterus_albus
ENSXETG00000012644	tarbp2	97	68.715	MGP_CAROLIEiJ_G0020356	Tarbp2	91	88.679	Mus_caroli
ENSXETG00000012644	tarbp2	97	68.715	ENSMUSG00000023051	Tarbp2	91	88.679	Mus_musculus
ENSXETG00000012644	tarbp2	97	68.994	MGP_PahariEiJ_G0020355	Tarbp2	91	88.679	Mus_pahari
ENSXETG00000012644	tarbp2	97	68.715	MGP_SPRETEiJ_G0021249	Tarbp2	91	88.679	Mus_spretus
ENSXETG00000012644	tarbp2	97	70.914	ENSMPUG00000005944	TARBP2	97	70.914	Mustela_putorius_furo
ENSXETG00000012644	tarbp2	97	69.663	ENSMLUG00000010035	TARBP2	97	70.195	Myotis_lucifugus
ENSXETG00000012644	tarbp2	97	70.391	ENSNLEG00000017690	TARBP2	97	70.752	Nomascus_leucogenys
ENSXETG00000012644	tarbp2	97	71.221	ENSMEUG00000001916	TARBP2	97	71.221	Notamacropus_eugenii
ENSXETG00000012644	tarbp2	62	72.973	ENSOPRG00000011397	TARBP2	99	72.973	Ochotona_princeps
ENSXETG00000012644	tarbp2	62	72.247	ENSODEG00000013413	TARBP2	100	72.247	Octodon_degus
ENSXETG00000012644	tarbp2	95	68.060	ENSONIG00000005115	tarbp2	96	67.989	Oreochromis_niloticus
ENSXETG00000012644	tarbp2	100	70.492	ENSOCUG00000005700	TARBP2	100	70.492	Oryctolagus_cuniculus
ENSXETG00000012644	tarbp2	97	69.767	ENSORLG00000005209	tarbp2	97	69.767	Oryzias_latipes
ENSXETG00000012644	tarbp2	97	69.767	ENSORLG00020017755	tarbp2	97	69.767	Oryzias_latipes_hni
ENSXETG00000012644	tarbp2	97	69.767	ENSORLG00015013237	tarbp2	97	69.767	Oryzias_latipes_hsok
ENSXETG00000012644	tarbp2	97	70.058	ENSOMEG00000018860	tarbp2	97	70.058	Oryzias_melastigma
ENSXETG00000012644	tarbp2	97	69.296	ENSOGAG00000001744	TARBP2	97	70.423	Otolemur_garnettii
ENSXETG00000012644	tarbp2	97	69.101	ENSOARG00000016437	TARBP2	97	70.474	Ovis_aries
ENSXETG00000012644	tarbp2	97	70.391	ENSPPAG00000030429	TARBP2	97	70.752	Pan_paniscus
ENSXETG00000012644	tarbp2	97	70.112	ENSPPRG00000000189	TARBP2	97	70.474	Panthera_pardus
ENSXETG00000012644	tarbp2	97	70.487	ENSPTIG00000007859	TARBP2	97	70.487	Panthera_tigris_altaica
ENSXETG00000012644	tarbp2	97	70.391	ENSPTRG00000005020	TARBP2	97	70.752	Pan_troglodytes
ENSXETG00000012644	tarbp2	97	69.916	ENSPANG00000010689	TARBP2	97	70.752	Papio_anubis
ENSXETG00000012644	tarbp2	99	70.170	ENSPKIG00000002455	tarbp2	98	70.170	Paramormyrops_kingsleyae
ENSXETG00000012644	tarbp2	97	69.653	ENSPMGG00000006497	tarbp2	97	69.653	Periophthalmus_magnuspinnatus
ENSXETG00000012644	tarbp2	97	69.663	ENSPEMG00000014285	Tarbp2	97	69.663	Peromyscus_maniculatus_bairdii
ENSXETG00000012644	tarbp2	94	58.006	ENSPMAG00000000105	tarbp2	100	58.006	Petromyzon_marinus
ENSXETG00000012644	tarbp2	97	71.802	ENSPCIG00000006672	TARBP2	89	71.802	Phascolarctos_cinereus
ENSXETG00000012644	tarbp2	97	70.930	ENSPFOG00000007586	tarbp2	97	71.221	Poecilia_formosa
ENSXETG00000012644	tarbp2	97	70.520	ENSPLAG00000017659	tarbp2	97	70.520	Poecilia_latipinna
ENSXETG00000012644	tarbp2	97	70.930	ENSPMEG00000007775	tarbp2	97	71.221	Poecilia_mexicana
ENSXETG00000012644	tarbp2	97	71.221	ENSPREG00000007815	tarbp2	97	71.512	Poecilia_reticulata
ENSXETG00000012644	tarbp2	97	65.418	ENSPPYG00000004583	TARBP2	96	66.377	Pongo_abelii
ENSXETG00000012644	tarbp2	80	66.667	ENSPCAG00000005352	TARBP2	80	67.010	Procavia_capensis
ENSXETG00000012644	tarbp2	97	69.832	ENSPCOG00000013102	TARBP2	97	71.309	Propithecus_coquereli
ENSXETG00000012644	tarbp2	97	68.232	ENSPVAG00000012286	TARBP2	97	68.232	Pteropus_vampyrus
ENSXETG00000012644	tarbp2	97	68.605	ENSPNYG00000014125	tarbp2	97	68.895	Pundamilia_nyererei
ENSXETG00000012644	tarbp2	77	83.784	ENSPNAG00000011128	tarbp2	98	70.857	Pygocentrus_nattereri
ENSXETG00000012644	tarbp2	97	68.927	ENSRNOG00000042355	Tarbp2	97	69.209	Rattus_norvegicus
ENSXETG00000012644	tarbp2	97	69.553	ENSRBIG00000027150	TARBP2	97	70.752	Rhinopithecus_bieti
ENSXETG00000012644	tarbp2	97	69.553	ENSRROG00000044783	TARBP2	100	70.774	Rhinopithecus_roxellana
ENSXETG00000012644	tarbp2	97	69.274	ENSSBOG00000027305	TARBP2	97	70.474	Saimiri_boliviensis_boliviensis
ENSXETG00000012644	tarbp2	97	70.056	ENSSHAG00000007064	TARBP2	100	71.856	Sarcophilus_harrisii
ENSXETG00000012644	tarbp2	99	68.258	ENSSFOG00015010784	tarbp2	98	68.258	Scleropages_formosus
ENSXETG00000012644	tarbp2	99	67.318	ENSSMAG00000012769	tarbp2	99	66.942	Scophthalmus_maximus
ENSXETG00000012644	tarbp2	97	69.767	ENSSDUG00000018818	tarbp2	97	70.349	Seriola_dumerili
ENSXETG00000012644	tarbp2	97	69.767	ENSSLDG00000001835	tarbp2	99	69.143	Seriola_lalandi_dorsalis
ENSXETG00000012644	tarbp2	70	69.231	ENSSARG00000001010	TARBP2	69	74.468	Sorex_araneus
ENSXETG00000012644	tarbp2	98	54.416	ENSSPUG00000005895	TARBP2	97	54.674	Sphenodon_punctatus
ENSXETG00000012644	tarbp2	97	70.349	ENSSPAG00000022797	tarbp2	97	70.349	Stegastes_partitus
ENSXETG00000012644	tarbp2	97	70.112	ENSSSCG00000000276	TARBP2	100	70.487	Sus_scrofa
ENSXETG00000012644	tarbp2	72	56.863	ENSTGUG00000017031	TARBP2	100	56.863	Taeniopygia_guttata
ENSXETG00000012644	tarbp2	97	69.767	ENSTRUG00000014379	tarbp2	97	69.767	Takifugu_rubripes
ENSXETG00000012644	tarbp2	97	70.058	ENSTNIG00000007065	tarbp2	97	70.058	Tetraodon_nigroviridis
ENSXETG00000012644	tarbp2	97	71.067	ENSTTRG00000017177	TARBP2	97	71.348	Tursiops_truncatus
ENSXETG00000012644	tarbp2	97	69.663	ENSUAMG00000009011	TARBP2	97	70.474	Ursus_americanus
ENSXETG00000012644	tarbp2	97	69.101	ENSUMAG00000010461	TARBP2	97	69.916	Ursus_maritimus
ENSXETG00000012644	tarbp2	97	70.670	ENSVVUG00000028150	TARBP2	100	71.060	Vulpes_vulpes
ENSXETG00000012644	tarbp2	97	71.221	ENSXMAG00000017836	tarbp2	97	71.512	Xiphophorus_maculatus