EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000012917 (Gene tree)
Gene ID: -
Gene Symbol: zcchc17
Alias: -
Full Name: Xenopus tropicalis zinc finger CCHC-type containing 17 (zcchc17)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 10580 bases
Position: chrGL173114.1:304710-315289
Accession: NM_001017183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063899	S1	PF00575.23	6.3e-14	1	1
ENSXETP00000028271	S1	PF00575.23	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061509	-	1195	-	ENSXETP00000063899	176 (aa)	-	F7DHX7
ENSXETT00000028271	-	1199	-	ENSXETP00000028271	234 (aa)	-	Q6QX57

Gene Model

Click here to download ENSXETG00000012917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000012917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000012917	zcchc17	86	80.263	ENSG00000121766	ZCCHC17	94	76.642	Homo_sapiens
ENSXETG00000012917	zcchc17	86	61.184	ENSAPOG00000021724	zcchc17	64	60.625	Acanthochromis_polyacanthus
ENSXETG00000012917	zcchc17	86	80.263	ENSAMEG00000017710	-	65	80.128	Ailuropoda_melanoleuca
ENSXETG00000012917	zcchc17	86	62.500	ENSACIG00000020915	zcchc17	89	61.654	Amphilophus_citrinellus
ENSXETG00000012917	zcchc17	86	61.184	ENSAOCG00000003880	zcchc17	65	60.625	Amphiprion_ocellaris
ENSXETG00000012917	zcchc17	86	61.184	ENSAPEG00000014460	zcchc17	66	60.625	Amphiprion_percula
ENSXETG00000012917	zcchc17	85	62.000	ENSATEG00000015942	zcchc17	65	61.875	Anabas_testudineus
ENSXETG00000012917	zcchc17	84	79.730	ENSACAG00000000389	ZCCHC17	66	78.481	Anolis_carolinensis
ENSXETG00000012917	zcchc17	86	80.263	ENSANAG00000024208	ZCCHC17	94	76.642	Aotus_nancymaae
ENSXETG00000012917	zcchc17	86	63.158	ENSACLG00000019174	zcchc17	64	62.500	Astatotilapia_calliptera
ENSXETG00000012917	zcchc17	86	69.079	ENSAMXG00000020595	zcchc17	72	66.061	Astyanax_mexicanus
ENSXETG00000012917	zcchc17	86	75.658	ENSBTAG00000001432	-	65	75.641	Bos_taurus
ENSXETG00000012917	zcchc17	86	80.263	ENSBTAG00000016818	ZCCHC17	65	80.128	Bos_taurus
ENSXETG00000012917	zcchc17	86	78.289	ENSCJAG00000045207	-	67	77.640	Callithrix_jacchus
ENSXETG00000012917	zcchc17	86	79.605	ENSCJAG00000006259	ZCCHC17	94	75.912	Callithrix_jacchus
ENSXETG00000012917	zcchc17	86	78.289	ENSCAFG00000001857	-	66	78.205	Canis_familiaris
ENSXETG00000012917	zcchc17	86	80.263	ENSCAFG00000011131	-	65	80.128	Canis_familiaris
ENSXETG00000012917	zcchc17	72	77.953	ENSCAFG00020024828	ZCCHC17	84	78.788	Canis_lupus_dingo
ENSXETG00000012917	zcchc17	79	71.223	ENSCAFG00020016032	-	87	71.223	Canis_lupus_dingo
ENSXETG00000012917	zcchc17	86	80.263	ENSCHIG00000015629	-	65	80.128	Capra_hircus
ENSXETG00000012917	zcchc17	86	80.263	ENSTSYG00000000490	-	94	76.642	Carlito_syrichta
ENSXETG00000012917	zcchc17	86	78.289	ENSCAPG00000006774	ZCCHC17	72	78.205	Cavia_aperea
ENSXETG00000012917	zcchc17	86	79.605	ENSCPOG00000022394	-	76	79.487	Cavia_porcellus
ENSXETG00000012917	zcchc17	86	80.263	ENSCPOG00000000106	ZCCHC17	65	80.128	Cavia_porcellus
ENSXETG00000012917	zcchc17	86	80.263	ENSCCAG00000033666	ZCCHC17	94	76.642	Cebus_capucinus
ENSXETG00000012917	zcchc17	86	80.263	ENSCATG00000044586	ZCCHC17	94	76.642	Cercocebus_atys
ENSXETG00000012917	zcchc17	86	80.795	ENSCLAG00000008794	ZCCHC17	65	80.769	Chinchilla_lanigera
ENSXETG00000012917	zcchc17	86	80.263	ENSCSAG00000001032	ZCCHC17	65	80.128	Chlorocebus_sabaeus
ENSXETG00000012917	zcchc17	86	64.474	ENSCHOG00000001581	ZCCHC17	65	64.744	Choloepus_hoffmanni
ENSXETG00000012917	zcchc17	86	80.263	ENSCANG00000038509	ZCCHC17	94	76.642	Colobus_angolensis_palliatus
ENSXETG00000012917	zcchc17	86	80.795	ENSCGRG00001014387	Zcchc17	65	80.255	Cricetulus_griseus_chok1gshd
ENSXETG00000012917	zcchc17	86	80.795	ENSCGRG00000013323	Zcchc17	65	80.255	Cricetulus_griseus_crigri
ENSXETG00000012917	zcchc17	86	64.474	ENSCSEG00000016039	zcchc17	86	63.910	Cynoglossus_semilaevis
ENSXETG00000012917	zcchc17	86	64.474	ENSCVAG00000007112	zcchc17	66	61.212	Cyprinodon_variegatus
ENSXETG00000012917	zcchc17	81	69.930	ENSDARG00000018936	zcchc17	67	69.620	Danio_rerio
ENSXETG00000012917	zcchc17	86	80.263	ENSDNOG00000000509	-	65	80.128	Dasypus_novemcinctus
ENSXETG00000012917	zcchc17	75	78.788	ENSDORG00000004128	Zcchc17	87	78.788	Dipodomys_ordii
ENSXETG00000012917	zcchc17	85	80.667	ENSETEG00000007421	ZCCHC17	67	78.125	Echinops_telfairi
ENSXETG00000012917	zcchc17	86	80.263	ENSEASG00005010819	ZCCHC17	64	80.000	Equus_asinus_asinus
ENSXETG00000012917	zcchc17	86	80.263	ENSECAG00000025040	ZCCHC17	56	80.000	Equus_caballus
ENSXETG00000012917	zcchc17	86	78.947	ENSEEUG00000014855	ZCCHC17	65	78.846	Erinaceus_europaeus
ENSXETG00000012917	zcchc17	86	67.763	ENSELUG00000002450	zcchc17	69	64.634	Esox_lucius
ENSXETG00000012917	zcchc17	86	80.263	ENSFCAG00000004196	ZCCHC17	93	76.642	Felis_catus
ENSXETG00000012917	zcchc17	85	80.667	ENSFALG00000001165	ZCCHC17	64	80.255	Ficedula_albicollis
ENSXETG00000012917	zcchc17	86	80.263	ENSFDAG00000016520	ZCCHC17	65	80.128	Fukomys_damarensis
ENSXETG00000012917	zcchc17	85	60.667	ENSFHEG00000007848	zcchc17	69	59.763	Fundulus_heteroclitus
ENSXETG00000012917	zcchc17	86	61.184	ENSGMOG00000010452	zcchc17	65	58.788	Gadus_morhua
ENSXETG00000012917	zcchc17	86	81.457	ENSGALG00000000618	ZCCHC17	66	80.892	Gallus_gallus
ENSXETG00000012917	zcchc17	86	60.265	ENSGAFG00000015591	zcchc17	95	49.569	Gambusia_affinis
ENSXETG00000012917	zcchc17	86	61.842	ENSGACG00000005616	zcchc17	62	61.250	Gasterosteus_aculeatus
ENSXETG00000012917	zcchc17	86	80.263	ENSGAGG00000019515	ZCCHC17	63	79.355	Gopherus_agassizii
ENSXETG00000012917	zcchc17	86	80.263	ENSGGOG00000009126	ZCCHC17	94	76.642	Gorilla_gorilla
ENSXETG00000012917	zcchc17	86	63.158	ENSHBUG00000018638	zcchc17	64	62.500	Haplochromis_burtoni
ENSXETG00000012917	zcchc17	86	67.105	ENSHGLG00000014866	-	70	66.667	Heterocephalus_glaber_female
ENSXETG00000012917	zcchc17	86	80.263	ENSHGLG00000019323	ZCCHC17	65	80.128	Heterocephalus_glaber_female
ENSXETG00000012917	zcchc17	86	74.342	ENSHGLG00000005931	-	69	74.194	Heterocephalus_glaber_female
ENSXETG00000012917	zcchc17	86	67.105	ENSHGLG00100000976	-	70	66.667	Heterocephalus_glaber_male
ENSXETG00000012917	zcchc17	86	78.146	ENSHGLG00100019907	-	65	77.564	Heterocephalus_glaber_male
ENSXETG00000012917	zcchc17	86	74.342	ENSHGLG00100009772	-	70	74.194	Heterocephalus_glaber_male
ENSXETG00000012917	zcchc17	72	77.953	ENSHGLG00100014521	ZCCHC17	86	78.788	Heterocephalus_glaber_male
ENSXETG00000012917	zcchc17	86	60.526	ENSHCOG00000005075	zcchc17	65	60.000	Hippocampus_comes
ENSXETG00000012917	zcchc17	86	69.281	ENSIPUG00000020511	zcchc17	68	69.427	Ictalurus_punctatus
ENSXETG00000012917	zcchc17	86	80.263	ENSSTOG00000003825	ZCCHC17	68	77.576	Ictidomys_tridecemlineatus
ENSXETG00000012917	zcchc17	86	60.526	ENSKMAG00000003662	zcchc17	65	60.000	Kryptolebias_marmoratus
ENSXETG00000012917	zcchc17	86	62.500	ENSLBEG00000002644	zcchc17	66	59.146	Labrus_bergylta
ENSXETG00000012917	zcchc17	85	74.000	ENSLACG00000016945	ZCCHC17	64	74.000	Latimeria_chalumnae
ENSXETG00000012917	zcchc17	86	79.470	ENSLOCG00000005280	zcchc17	60	79.487	Lepisosteus_oculatus
ENSXETG00000012917	zcchc17	86	80.263	ENSLAFG00000015364	ZCCHC17	64	80.128	Loxodonta_africana
ENSXETG00000012917	zcchc17	86	80.263	ENSMFAG00000039045	ZCCHC17	94	76.642	Macaca_fascicularis
ENSXETG00000012917	zcchc17	86	80.263	ENSMMUG00000012156	ZCCHC17	94	76.642	Macaca_mulatta
ENSXETG00000012917	zcchc17	86	80.263	ENSMNEG00000032021	ZCCHC17	94	76.642	Macaca_nemestrina
ENSXETG00000012917	zcchc17	86	80.263	ENSMLEG00000040817	ZCCHC17	94	76.642	Mandrillus_leucophaeus
ENSXETG00000012917	zcchc17	86	64.474	ENSMAMG00000011701	zcchc17	67	62.500	Mastacembelus_armatus
ENSXETG00000012917	zcchc17	86	63.158	ENSMZEG00005005784	zcchc17	64	62.500	Maylandia_zebra
ENSXETG00000012917	zcchc17	86	80.795	ENSMGAG00000000777	ZCCHC17	64	80.255	Meleagris_gallopavo
ENSXETG00000012917	zcchc17	78	81.022	ENSMAUG00000005269	Zcchc17	63	80.986	Mesocricetus_auratus
ENSXETG00000012917	zcchc17	86	80.263	ENSMICG00000009354	-	94	76.642	Microcebus_murinus
ENSXETG00000012917	zcchc17	81	67.133	ENSMICG00000027526	-	64	67.832	Microcebus_murinus
ENSXETG00000012917	zcchc17	53	70.968	ENSMICG00000035778	-	51	70.968	Microcebus_murinus
ENSXETG00000012917	zcchc17	86	71.053	ENSMICG00000028289	-	64	71.154	Microcebus_murinus
ENSXETG00000012917	zcchc17	86	80.795	ENSMOCG00000014937	Zcchc17	65	80.769	Microtus_ochrogaster
ENSXETG00000012917	zcchc17	86	56.954	ENSMMOG00000019813	zcchc17	66	56.954	Mola_mola
ENSXETG00000012917	zcchc17	86	75.497	ENSMODG00000017082	-	64	75.159	Monodelphis_domestica
ENSXETG00000012917	zcchc17	86	65.563	ENSMODG00000025345	-	75	64.968	Monodelphis_domestica
ENSXETG00000012917	zcchc17	86	71.523	ENSMODG00000020372	-	84	71.975	Monodelphis_domestica
ENSXETG00000012917	zcchc17	86	63.158	ENSMALG00000016295	zcchc17	68	61.875	Monopterus_albus
ENSXETG00000012917	zcchc17	86	80.795	MGP_CAROLIEiJ_G0026546	Zcchc17	65	80.769	Mus_caroli
ENSXETG00000012917	zcchc17	86	80.795	ENSMUSG00000028772	Zcchc17	65	80.769	Mus_musculus
ENSXETG00000012917	zcchc17	86	80.795	MGP_PahariEiJ_G0028878	Zcchc17	65	80.769	Mus_pahari
ENSXETG00000012917	zcchc17	86	80.795	MGP_SPRETEiJ_G0027526	Zcchc17	65	80.769	Mus_spretus
ENSXETG00000012917	zcchc17	86	71.711	ENSMPUG00000015442	ZCCHC17	65	71.795	Mustela_putorius_furo
ENSXETG00000012917	zcchc17	86	80.263	ENSMLUG00000000594	ZCCHC17	65	79.487	Myotis_lucifugus
ENSXETG00000012917	zcchc17	86	78.947	ENSNGAG00000022689	Zcchc17	64	78.846	Nannospalax_galili
ENSXETG00000012917	zcchc17	52	49.451	ENSNBRG00000010797	zcchc17	60	49.451	Neolamprologus_brichardi
ENSXETG00000012917	zcchc17	86	80.263	ENSNLEG00000001493	ZCCHC17	94	76.642	Nomascus_leucogenys
ENSXETG00000012917	zcchc17	78	80.435	ENSOPRG00000014449	ZCCHC17	72	80.282	Ochotona_princeps
ENSXETG00000012917	zcchc17	86	80.263	ENSODEG00000003683	ZCCHC17	65	80.128	Octodon_degus
ENSXETG00000012917	zcchc17	86	63.158	ENSONIG00000002308	zcchc17	64	62.658	Oreochromis_niloticus
ENSXETG00000012917	zcchc17	86	74.834	ENSOCUG00000027238	-	67	72.393	Oryctolagus_cuniculus
ENSXETG00000012917	zcchc17	86	62.500	ENSORLG00000011563	zcchc17	74	60.606	Oryzias_latipes
ENSXETG00000012917	zcchc17	86	62.500	ENSORLG00020019636	zcchc17	78	60.606	Oryzias_latipes_hni
ENSXETG00000012917	zcchc17	86	62.500	ENSORLG00015011437	zcchc17	67	60.000	Oryzias_latipes_hsok
ENSXETG00000012917	zcchc17	86	63.158	ENSOMEG00000009464	zcchc17	67	61.212	Oryzias_melastigma
ENSXETG00000012917	zcchc17	86	78.947	ENSOGAG00000013749	ZCCHC17	65	78.344	Otolemur_garnettii
ENSXETG00000012917	zcchc17	86	79.739	ENSOARG00000001618	-	65	79.618	Ovis_aries
ENSXETG00000012917	zcchc17	86	80.263	ENSPPAG00000030937	ZCCHC17	94	76.642	Pan_paniscus
ENSXETG00000012917	zcchc17	86	80.263	ENSPPRG00000003044	ZCCHC17	93	76.642	Panthera_pardus
ENSXETG00000012917	zcchc17	86	80.263	ENSPTIG00000010650	ZCCHC17	93	76.642	Panthera_tigris_altaica
ENSXETG00000012917	zcchc17	86	80.263	ENSPTRG00000000456	ZCCHC17	94	76.642	Pan_troglodytes
ENSXETG00000012917	zcchc17	86	80.263	ENSPANG00000016167	ZCCHC17	94	76.642	Papio_anubis
ENSXETG00000012917	zcchc17	85	74.000	ENSPKIG00000010742	zcchc17	62	74.359	Paramormyrops_kingsleyae
ENSXETG00000012917	zcchc17	86	81.457	ENSPSIG00000007187	ZCCHC17	63	80.892	Pelodiscus_sinensis
ENSXETG00000012917	zcchc17	86	64.474	ENSPMGG00000005830	zcchc17	66	63.580	Periophthalmus_magnuspinnatus
ENSXETG00000012917	zcchc17	86	80.795	ENSPEMG00000015853	-	65	80.769	Peromyscus_maniculatus_bairdii
ENSXETG00000012917	zcchc17	86	74.834	ENSPCIG00000014143	-	65	74.522	Phascolarctos_cinereus
ENSXETG00000012917	zcchc17	86	59.868	ENSPFOG00000007896	zcchc17	69	58.025	Poecilia_formosa
ENSXETG00000012917	zcchc17	86	59.868	ENSPLAG00000007114	zcchc17	64	58.125	Poecilia_latipinna
ENSXETG00000012917	zcchc17	86	59.868	ENSPMEG00000014567	zcchc17	64	58.125	Poecilia_mexicana
ENSXETG00000012917	zcchc17	86	59.603	ENSPREG00000005325	zcchc17	54	56.970	Poecilia_reticulata
ENSXETG00000012917	zcchc17	86	78.289	ENSPPYG00000001617	-	55	78.205	Pongo_abelii
ENSXETG00000012917	zcchc17	86	74.342	ENSPCAG00000011665	ZCCHC17	65	74.359	Procavia_capensis
ENSXETG00000012917	zcchc17	86	80.263	ENSPCOG00000024007	ZCCHC17	94	76.642	Propithecus_coquereli
ENSXETG00000012917	zcchc17	86	80.263	ENSPVAG00000014747	ZCCHC17	94	59.912	Pteropus_vampyrus
ENSXETG00000012917	zcchc17	86	63.158	ENSPNYG00000009648	zcchc17	94	61.481	Pundamilia_nyererei
ENSXETG00000012917	zcchc17	86	70.861	ENSPNAG00000026780	zcchc17	68	70.440	Pygocentrus_nattereri
ENSXETG00000012917	zcchc17	86	80.795	ENSRNOG00000012266	Zcchc17	65	80.769	Rattus_norvegicus
ENSXETG00000012917	zcchc17	86	80.263	ENSRBIG00000033939	ZCCHC17	94	76.642	Rhinopithecus_bieti
ENSXETG00000012917	zcchc17	86	80.263	ENSRROG00000028866	ZCCHC17	94	76.642	Rhinopithecus_roxellana
ENSXETG00000012917	zcchc17	86	80.263	ENSSBOG00000029249	ZCCHC17	94	76.642	Saimiri_boliviensis_boliviensis
ENSXETG00000012917	zcchc17	86	74.834	ENSSHAG00000008748	ZCCHC17	65	74.522	Sarcophilus_harrisii
ENSXETG00000012917	zcchc17	86	76.316	ENSSFOG00015021334	zcchc17	60	75.974	Scleropages_formosus
ENSXETG00000012917	zcchc17	86	61.842	ENSSMAG00000010817	zcchc17	63	60.366	Scophthalmus_maximus
ENSXETG00000012917	zcchc17	86	61.184	ENSSDUG00000009095	zcchc17	63	60.625	Seriola_dumerili
ENSXETG00000012917	zcchc17	86	61.184	ENSSLDG00000009837	zcchc17	76	60.000	Seriola_lalandi_dorsalis
ENSXETG00000012917	zcchc17	86	80.263	ENSSPUG00000006912	ZCCHC17	61	80.769	Sphenodon_punctatus
ENSXETG00000012917	zcchc17	85	60.000	ENSSPAG00000016785	zcchc17	64	60.000	Stegastes_partitus
ENSXETG00000012917	zcchc17	86	80.263	ENSSSCG00000031639	ZCCHC17	65	80.128	Sus_scrofa
ENSXETG00000012917	zcchc17	78	75.362	ENSTGUG00000000817	ZCCHC17	65	75.000	Taeniopygia_guttata
ENSXETG00000012917	zcchc17	86	63.158	ENSTRUG00000013252	zcchc17	66	61.728	Takifugu_rubripes
ENSXETG00000012917	zcchc17	86	60.526	ENSTNIG00000016980	zcchc17	66	60.897	Tetraodon_nigroviridis
ENSXETG00000012917	zcchc17	86	80.263	ENSTTRG00000014870	ZCCHC17	65	80.128	Tursiops_truncatus
ENSXETG00000012917	zcchc17	86	80.263	ENSUAMG00000018258	ZCCHC17	80	80.128	Ursus_americanus
ENSXETG00000012917	zcchc17	86	80.263	ENSUMAG00000009188	-	65	80.128	Ursus_maritimus
ENSXETG00000012917	zcchc17	86	79.470	ENSVPAG00000003834	ZCCHC17	65	79.487	Vicugna_pacos
ENSXETG00000012917	zcchc17	86	59.868	ENSXCOG00000020147	zcchc17	67	58.750	Xiphophorus_couchianus
ENSXETG00000012917	zcchc17	86	59.868	ENSXMAG00000002980	zcchc17	65	58.750	Xiphophorus_maculatus