EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000013132 (Gene tree)
Gene ID: -
Gene Symbol: scaf8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 71700 bases
Position: chrGL172638.1:3761658-3833357
Accession: XB-GENE-919922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060336	RRM_1	PF00076.22	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064678	-	3798	-	ENSXETP00000060336	1265 (aa)	-	F6WW24
ENSXETT00000028751	-	5081	-	ENSXETP00000028751	390 (aa)	-	F7EII4

Gene Model

Click here to download ENSXETG00000013132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013132	scaf8	100	61.425	ENSG00000213079	SCAF8	100	61.408	Homo_sapiens
ENSXETG00000013132	scaf8	77	70.344	ENSAPOG00000015527	SCAF8	70	70.520	Acanthochromis_polyacanthus
ENSXETG00000013132	scaf8	99	61.785	ENSAMEG00000007583	SCAF8	95	61.707	Ailuropoda_melanoleuca
ENSXETG00000013132	scaf8	77	70.487	ENSAOCG00000002421	SCAF8	70	70.665	Amphiprion_ocellaris
ENSXETG00000013132	scaf8	77	59.693	ENSAPEG00000020115	SCAF8	72	63.830	Amphiprion_percula
ENSXETG00000013132	scaf8	79	68.261	ENSATEG00000006959	SCAF8	88	68.513	Anabas_testudineus
ENSXETG00000013132	scaf8	62	80.628	ENSAPLG00000005765	SCAF8	99	61.604	Anas_platyrhynchos
ENSXETG00000013132	scaf8	59	79.679	ENSACAG00000005282	SCAF8	99	59.193	Anolis_carolinensis
ENSXETG00000013132	scaf8	100	61.503	ENSANAG00000036184	SCAF8	100	61.485	Aotus_nancymaae
ENSXETG00000013132	scaf8	81	67.072	ENSACLG00000018828	SCAF8	73	70.087	Astatotilapia_calliptera
ENSXETG00000013132	scaf8	100	61.215	ENSBTAG00000031917	SCAF8	100	61.120	Bos_taurus
ENSXETG00000013132	scaf8	100	61.658	ENSCJAG00000012631	SCAF8	94	61.964	Callithrix_jacchus
ENSXETG00000013132	scaf8	99	61.659	ENSCAFG00000000570	SCAF8	99	61.641	Canis_familiaris
ENSXETG00000013132	scaf8	99	61.689	ENSCAFG00020015048	SCAF8	99	61.538	Canis_lupus_dingo
ENSXETG00000013132	scaf8	100	61.371	ENSCHIG00000025041	SCAF8	100	61.305	Capra_hircus
ENSXETG00000013132	scaf8	99	61.707	ENSTSYG00000010991	SCAF8	97	61.689	Carlito_syrichta
ENSXETG00000013132	scaf8	61	81.116	ENSCAPG00000003300	SCAF8	85	83.607	Cavia_aperea
ENSXETG00000013132	scaf8	99	54.460	ENSCPOG00000030311	-	99	52.553	Cavia_porcellus
ENSXETG00000013132	scaf8	99	54.545	ENSCPOG00000022216	-	99	54.617	Cavia_porcellus
ENSXETG00000013132	scaf8	100	61.503	ENSCCAG00000024952	SCAF8	100	61.485	Cebus_capucinus
ENSXETG00000013132	scaf8	100	61.503	ENSCATG00000035361	SCAF8	100	61.485	Cercocebus_atys
ENSXETG00000013132	scaf8	99	61.599	ENSCLAG00000004910	SCAF8	100	61.581	Chinchilla_lanigera
ENSXETG00000013132	scaf8	99	61.905	ENSCSAG00000013430	SCAF8	98	61.886	Chlorocebus_sabaeus
ENSXETG00000013132	scaf8	60	80.211	ENSCPBG00000016330	SCAF8	100	55.155	Chrysemys_picta_bellii
ENSXETG00000013132	scaf8	100	61.503	ENSCANG00000039499	SCAF8	99	61.808	Colobus_angolensis_palliatus
ENSXETG00000013132	scaf8	99	60.876	ENSCGRG00001020167	Scaf8	100	60.404	Cricetulus_griseus_chok1gshd
ENSXETG00000013132	scaf8	99	60.876	ENSCGRG00000004120	Scaf8	99	60.700	Cricetulus_griseus_crigri
ENSXETG00000013132	scaf8	77	69.484	ENSCSEG00000000043	-	71	69.175	Cynoglossus_semilaevis
ENSXETG00000013132	scaf8	76	66.373	ENSCVAG00000000925	SCAF8	70	69.829	Cyprinodon_variegatus
ENSXETG00000013132	scaf8	96	60.308	ENSDNOG00000025271	SCAF8	100	59.580	Dasypus_novemcinctus
ENSXETG00000013132	scaf8	99	60.826	ENSDORG00000006391	Scaf8	100	60.978	Dipodomys_ordii
ENSXETG00000013132	scaf8	100	61.413	ENSEASG00005018879	SCAF8	100	61.580	Equus_asinus_asinus
ENSXETG00000013132	scaf8	100	61.383	ENSECAG00000005540	SCAF8	100	61.550	Equus_caballus
ENSXETG00000013132	scaf8	58	65.909	ENSELUG00000002779	SCAF8	96	66.040	Esox_lucius
ENSXETG00000013132	scaf8	100	61.916	ENSFCAG00000023424	SCAF8	100	61.820	Felis_catus
ENSXETG00000013132	scaf8	61	82.133	ENSFALG00000012433	SCAF8	99	60.611	Ficedula_albicollis
ENSXETG00000013132	scaf8	99	61.599	ENSFDAG00000010335	SCAF8	99	61.581	Fukomys_damarensis
ENSXETG00000013132	scaf8	60	67.033	ENSFHEG00000008284	SCAF8	71	69.364	Fundulus_heteroclitus
ENSXETG00000013132	scaf8	54	70.333	ENSGMOG00000018812	SCAF8	62	71.179	Gadus_morhua
ENSXETG00000013132	scaf8	93	82.480	ENSGALG00000013635	SCAF8	98	62.315	Gallus_gallus
ENSXETG00000013132	scaf8	77	68.803	ENSGAFG00000018033	SCAF8	72	70.647	Gambusia_affinis
ENSXETG00000013132	scaf8	78	69.697	ENSGACG00000006909	SCAF8	89	70.392	Gasterosteus_aculeatus
ENSXETG00000013132	scaf8	63	47.722	ENSGAGG00000017820	-	88	50.733	Gopherus_agassizii
ENSXETG00000013132	scaf8	100	61.425	ENSGGOG00000008645	SCAF8	100	61.408	Gorilla_gorilla
ENSXETG00000013132	scaf8	81	66.937	ENSHBUG00000019537	SCAF8	73	69.942	Haplochromis_burtoni
ENSXETG00000013132	scaf8	100	61.198	ENSHGLG00000003619	SCAF8	100	61.258	Heterocephalus_glaber_female
ENSXETG00000013132	scaf8	99	61.520	ENSHGLG00100004708	SCAF8	100	61.581	Heterocephalus_glaber_male
ENSXETG00000013132	scaf8	99	61.544	ENSSTOG00000026043	SCAF8	99	61.526	Ictidomys_tridecemlineatus
ENSXETG00000013132	scaf8	99	60.846	ENSJJAG00000020480	Scaf8	99	60.938	Jaculus_jaculus
ENSXETG00000013132	scaf8	77	70.875	ENSKMAG00000012767	SCAF8	72	71.635	Kryptolebias_marmoratus
ENSXETG00000013132	scaf8	53	75.798	ENSLACG00000001394	SCAF8	90	76.128	Latimeria_chalumnae
ENSXETG00000013132	scaf8	85	74.020	ENSLOCG00000016856	SCAF8	90	73.768	Lepisosteus_oculatus
ENSXETG00000013132	scaf8	100	60.739	ENSLAFG00000000022	SCAF8	100	61.038	Loxodonta_africana
ENSXETG00000013132	scaf8	100	61.580	ENSMFAG00000032738	SCAF8	100	61.562	Macaca_fascicularis
ENSXETG00000013132	scaf8	100	61.580	ENSMMUG00000015163	SCAF8	100	61.562	Macaca_mulatta
ENSXETG00000013132	scaf8	100	61.580	ENSMNEG00000043466	SCAF8	100	61.562	Macaca_nemestrina
ENSXETG00000013132	scaf8	99	61.827	ENSMLEG00000034845	SCAF8	99	61.808	Mandrillus_leucophaeus
ENSXETG00000013132	scaf8	73	68.664	ENSMAMG00000009457	SCAF8	69	69.767	Mastacembelus_armatus
ENSXETG00000013132	scaf8	81	67.072	ENSMZEG00005005698	SCAF8	73	70.087	Maylandia_zebra
ENSXETG00000013132	scaf8	61	82.796	ENSMGAG00000012762	SCAF8	99	62.238	Meleagris_gallopavo
ENSXETG00000013132	scaf8	99	60.941	ENSMAUG00000009513	Scaf8	100	60.689	Mesocricetus_auratus
ENSXETG00000013132	scaf8	100	61.449	ENSMICG00000028965	SCAF8	100	61.293	Microcebus_murinus
ENSXETG00000013132	scaf8	99	61.328	ENSMOCG00000014950	Scaf8	100	61.025	Microtus_ochrogaster
ENSXETG00000013132	scaf8	78	64.215	ENSMMOG00000002216	SCAF8	70	67.933	Mola_mola
ENSXETG00000013132	scaf8	99	61.659	ENSMODG00000008301	SCAF8	99	61.502	Monodelphis_domestica
ENSXETG00000013132	scaf8	53	66.667	ENSMALG00000011584	SCAF8	72	69.885	Monopterus_albus
ENSXETG00000013132	scaf8	100	60.903	MGP_CAROLIEiJ_G0021016	Scaf8	100	60.809	Mus_caroli
ENSXETG00000013132	scaf8	99	61.232	ENSMUSG00000046201	Scaf8	100	61.042	Mus_musculus
ENSXETG00000013132	scaf8	99	61.154	MGP_PahariEiJ_G0023334	Scaf8	100	60.964	Mus_pahari
ENSXETG00000013132	scaf8	99	61.991	ENSMPUG00000001974	SCAF8	98	61.834	Mustela_putorius_furo
ENSXETG00000013132	scaf8	99	61.490	ENSMLUG00000029190	SCAF8	99	60.846	Myotis_lucifugus
ENSXETG00000013132	scaf8	100	60.886	ENSNGAG00000012332	Scaf8	100	60.792	Nannospalax_galili
ENSXETG00000013132	scaf8	91	61.765	ENSNBRG00000009067	SCAF8	93	67.784	Neolamprologus_brichardi
ENSXETG00000013132	scaf8	100	60.201	ENSNLEG00000015509	SCAF8	99	60.590	Nomascus_leucogenys
ENSXETG00000013132	scaf8	70	79.381	ENSOPRG00000018413	-	78	79.381	Ochotona_princeps
ENSXETG00000013132	scaf8	100	60.822	ENSODEG00000007296	SCAF8	100	60.806	Octodon_degus
ENSXETG00000013132	scaf8	82	66.756	ENSONIG00000008119	SCAF8	83	70.087	Oreochromis_niloticus
ENSXETG00000013132	scaf8	99	61.689	ENSOCUG00000026063	SCAF8	99	61.671	Oryctolagus_cuniculus
ENSXETG00000013132	scaf8	77	70.243	ENSORLG00000017358	SCAF8	71	70.231	Oryzias_latipes
ENSXETG00000013132	scaf8	77	69.957	ENSORLG00020002214	SCAF8	71	69.942	Oryzias_latipes_hni
ENSXETG00000013132	scaf8	53	40.202	ENSORLG00020013853	scaf4b	81	39.087	Oryzias_latipes_hni
ENSXETG00000013132	scaf8	77	70.243	ENSORLG00015015779	SCAF8	71	70.231	Oryzias_latipes_hsok
ENSXETG00000013132	scaf8	77	70.732	ENSOMEG00000015471	SCAF8	71	70.376	Oryzias_melastigma
ENSXETG00000013132	scaf8	99	61.394	ENSOGAG00000034223	SCAF8	94	61.376	Otolemur_garnettii
ENSXETG00000013132	scaf8	99	61.725	ENSOARG00000004159	SCAF8	100	61.659	Ovis_aries
ENSXETG00000013132	scaf8	100	61.503	ENSPPAG00000039826	SCAF8	100	61.485	Pan_paniscus
ENSXETG00000013132	scaf8	100	61.916	ENSPPRG00000023175	SCAF8	100	61.820	Panthera_pardus
ENSXETG00000013132	scaf8	99	62.245	ENSPTIG00000014836	SCAF8	99	62.147	Panthera_tigris_altaica
ENSXETG00000013132	scaf8	100	61.580	ENSPTRG00000018727	SCAF8	100	61.562	Pan_troglodytes
ENSXETG00000013132	scaf8	100	61.425	ENSPANG00000017489	SCAF8	99	60.311	Papio_anubis
ENSXETG00000013132	scaf8	88	69.044	ENSPKIG00000021212	SCAF8	91	70.605	Paramormyrops_kingsleyae
ENSXETG00000013132	scaf8	73	75.410	ENSPSIG00000008614	SCAF8	68	77.079	Pelodiscus_sinensis
ENSXETG00000013132	scaf8	99	61.755	ENSPEMG00000010531	Scaf8	100	61.581	Peromyscus_maniculatus_bairdii
ENSXETG00000013132	scaf8	100	61.288	ENSPCIG00000001141	SCAF8	100	61.133	Phascolarctos_cinereus
ENSXETG00000013132	scaf8	86	66.929	ENSPFOG00000004176	SCAF8	93	50.996	Poecilia_formosa
ENSXETG00000013132	scaf8	80	66.758	ENSPLAG00000021432	SCAF8	71	69.364	Poecilia_latipinna
ENSXETG00000013132	scaf8	75	70.075	ENSPMEG00000007591	SCAF8	77	71.037	Poecilia_mexicana
ENSXETG00000013132	scaf8	80	68.182	ENSPREG00000000652	SCAF8	71	70.665	Poecilia_reticulata
ENSXETG00000013132	scaf8	100	59.861	ENSPPYG00000017121	SCAF8	100	59.923	Pongo_abelii
ENSXETG00000013132	scaf8	85	82.245	ENSPCAG00000013044	SCAF8	90	82.412	Procavia_capensis
ENSXETG00000013132	scaf8	100	61.526	ENSPCOG00000002067	SCAF8	99	61.629	Propithecus_coquereli
ENSXETG00000013132	scaf8	98	59.921	ENSPVAG00000005582	SCAF8	99	60.221	Pteropus_vampyrus
ENSXETG00000013132	scaf8	81	67.072	ENSPNYG00000007277	SCAF8	73	70.087	Pundamilia_nyererei
ENSXETG00000013132	scaf8	78	72.286	ENSPNAG00000024740	SCAF8	74	70.504	Pygocentrus_nattereri
ENSXETG00000013132	scaf8	99	61.303	ENSRNOG00000016919	Scaf8	100	60.964	Rattus_norvegicus
ENSXETG00000013132	scaf8	100	61.425	ENSRBIG00000035769	SCAF8	100	61.408	Rhinopithecus_bieti
ENSXETG00000013132	scaf8	100	61.348	ENSRROG00000013580	SCAF8	100	61.330	Rhinopithecus_roxellana
ENSXETG00000013132	scaf8	100	61.348	ENSSBOG00000027023	SCAF8	100	61.330	Saimiri_boliviensis_boliviensis
ENSXETG00000013132	scaf8	100	61.831	ENSSHAG00000009915	SCAF8	100	61.598	Sarcophilus_harrisii
ENSXETG00000013132	scaf8	54	65.067	ENSSFOG00015009481	SCAF8	62	65.600	Scleropages_formosus
ENSXETG00000013132	scaf8	54	43.188	ENSSMAG00000003738	scaf4b	80	42.482	Scophthalmus_maximus
ENSXETG00000013132	scaf8	77	70.043	ENSSMAG00000008275	SCAF8	70	70.418	Scophthalmus_maximus
ENSXETG00000013132	scaf8	84	79.826	ENSSPUG00000015219	SCAF8	86	80.116	Sphenodon_punctatus
ENSXETG00000013132	scaf8	100	62.072	ENSSSCG00000004070	SCAF8	100	78.198	Sus_scrofa
ENSXETG00000013132	scaf8	77	68.195	ENSTRUG00000009243	SCAF8	71	69.120	Takifugu_rubripes
ENSXETG00000013132	scaf8	80	64.507	ENSTNIG00000016885	SCAF8	89	67.630	Tetraodon_nigroviridis
ENSXETG00000013132	scaf8	99	61.942	ENSTTRG00000014538	SCAF8	100	61.808	Tursiops_truncatus
ENSXETG00000013132	scaf8	99	61.611	ENSUAMG00000024736	SCAF8	99	61.532	Ursus_americanus
ENSXETG00000013132	scaf8	98	61.410	ENSUMAG00000013404	SCAF8	100	61.331	Ursus_maritimus
ENSXETG00000013132	scaf8	67	75.039	ENSVPAG00000012465	SCAF8	80	75.486	Vicugna_pacos
ENSXETG00000013132	scaf8	99	61.707	ENSVVUG00000007532	SCAF8	100	61.313	Vulpes_vulpes
ENSXETG00000013132	scaf8	80	66.621	ENSXMAG00000019192	SCAF8	72	69.220	Xiphophorus_maculatus