EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000013137 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: -
Full Name: Xenopus tropicalis far upstream element binding protein 1 (fubp1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 19324 bases
Position: chrGL173150.1:470400-489723
Accession: NM_203962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000047315	KH_1	PF00013.29	1.1e-67	1	4
ENSXETP00000047315	KH_1	PF00013.29	1.1e-67	2	4
ENSXETP00000047315	KH_1	PF00013.29	1.1e-67	3	4
ENSXETP00000047315	KH_1	PF00013.29	1.1e-67	4	4
ENSXETP00000047315	KH_2	PF07650.17	2.2e-22	1	2
ENSXETP00000047315	KH_2	PF07650.17	2.2e-22	2	2
ENSXETP00000047315	DUF1897	PF09005.10	9.3e-14	1	2
ENSXETP00000047315	DUF1897	PF09005.10	9.3e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000047315	-	2960	-	ENSXETP00000047315	653 (aa)	-	Q6P3Q5

Gene Model

Click here to download ENSXETG00000013137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000013137	fubp1	91	53.527	ENSXETG00000021862	khsrp	66	53.880
ENSXETG00000013137	fubp1	96	61.538	ENSXETG00000001344	fubp3	88	63.403
ENSXETG00000013137	fubp1	51	39.062	ENSXETG00000011483	pcbp1	61	39.062
ENSXETG00000013137	fubp1	50	36.765	ENSXETG00000010244	nova1	51	36.765
ENSXETG00000013137	fubp1	51	39.062	ENSXETG00000012658	pcbp3	59	39.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013137	fubp1	95	62.208	ENSG00000088247	KHSRP	99	71.257	Homo_sapiens
ENSXETG00000013137	fubp1	89	56.721	ENSAPOG00000009524	khsrp	77	59.611	Acanthochromis_polyacanthus
ENSXETG00000013137	fubp1	94	61.068	ENSAMEG00000006978	KHSRP	63	67.133	Ailuropoda_melanoleuca
ENSXETG00000013137	fubp1	98	54.370	ENSACIG00000009298	khsrp	70	58.747	Amphilophus_citrinellus
ENSXETG00000013137	fubp1	79	53.061	ENSAOCG00000010189	KHSRP	87	59.825	Amphiprion_ocellaris
ENSXETG00000013137	fubp1	97	56.042	ENSAOCG00000010049	khsrp	69	59.611	Amphiprion_ocellaris
ENSXETG00000013137	fubp1	97	56.042	ENSAPEG00000013411	khsrp	69	59.611	Amphiprion_percula
ENSXETG00000013137	fubp1	98	54.748	ENSATEG00000019332	khsrp	68	58.963	Anabas_testudineus
ENSXETG00000013137	fubp1	98	49.125	ENSATEG00000024744	KHSRP	73	56.933	Anabas_testudineus
ENSXETG00000013137	fubp1	97	63.126	ENSACAG00000015398	KHSRP	62	66.893	Anolis_carolinensis
ENSXETG00000013137	fubp1	100	85.542	ENSANAG00000004931	-	100	85.542	Aotus_nancymaae
ENSXETG00000013137	fubp1	87	69.595	ENSANAG00000027617	KHSRP	79	62.946	Aotus_nancymaae
ENSXETG00000013137	fubp1	96	50.975	ENSACLG00000001424	KHSRP	82	56.933	Astatotilapia_calliptera
ENSXETG00000013137	fubp1	98	54.154	ENSACLG00000020487	khsrp	71	58.495	Astatotilapia_calliptera
ENSXETG00000013137	fubp1	97	55.162	ENSAMXG00000036582	khsrp	71	61.042	Astyanax_mexicanus
ENSXETG00000013137	fubp1	95	62.830	ENSBTAG00000021018	KHSRP	62	67.040	Bos_taurus
ENSXETG00000013137	fubp1	100	88.102	ENSBTAG00000008926	FUBP1	100	88.102	Bos_taurus
ENSXETG00000013137	fubp1	95	62.208	ENSCJAG00000016627	KHSRP	62	67.040	Callithrix_jacchus
ENSXETG00000013137	fubp1	84	62.566	ENSCAFG00000018667	KHSRP	59	69.337	Canis_familiaris
ENSXETG00000013137	fubp1	95	61.120	ENSCAFG00020019133	KHSRP	59	69.337	Canis_lupus_dingo
ENSXETG00000013137	fubp1	100	88.120	ENSCAFG00020015251	-	100	88.120	Canis_lupus_dingo
ENSXETG00000013137	fubp1	100	87.970	ENSCHIG00000013418	-	100	87.970	Capra_hircus
ENSXETG00000013137	fubp1	95	62.830	ENSCHIG00000027053	KHSRP	61	67.040	Capra_hircus
ENSXETG00000013137	fubp1	93	62.441	ENSTSYG00000011552	KHSRP	70	65.238	Carlito_syrichta
ENSXETG00000013137	fubp1	79	58.333	ENSCAPG00000005534	KHSRP	60	68.194	Cavia_aperea
ENSXETG00000013137	fubp1	94	56.884	ENSCPOG00000005140	KHSRP	58	66.824	Cavia_porcellus
ENSXETG00000013137	fubp1	95	58.556	ENSCCAG00000025297	KHSRP	64	66.816	Cebus_capucinus
ENSXETG00000013137	fubp1	95	59.906	ENSCATG00000036458	KHSRP	64	66.842	Cercocebus_atys
ENSXETG00000013137	fubp1	93	58.991	ENSCLAG00000007309	KHSRP	60	66.981	Chinchilla_lanigera
ENSXETG00000013137	fubp1	95	62.208	ENSCSAG00000009626	KHSRP	59	67.040	Chlorocebus_sabaeus
ENSXETG00000013137	fubp1	89	84.339	ENSCPBG00000016987	-	68	90.646	Chrysemys_picta_bellii
ENSXETG00000013137	fubp1	64	68.998	ENSCPBG00000005286	KHSRP	61	68.445	Chrysemys_picta_bellii
ENSXETG00000013137	fubp1	99	85.862	ENSCANG00000034534	-	99	85.862	Colobus_angolensis_palliatus
ENSXETG00000013137	fubp1	93	58.439	ENSCANG00000015665	KHSRP	66	67.376	Colobus_angolensis_palliatus
ENSXETG00000013137	fubp1	95	62.053	ENSCGRG00001011031	Khsrp	61	67.040	Cricetulus_griseus_chok1gshd
ENSXETG00000013137	fubp1	93	57.853	ENSCGRG00000015331	Khsrp	58	66.582	Cricetulus_griseus_crigri
ENSXETG00000013137	fubp1	98	50.975	ENSCSEG00000011429	khsrp	71	59.649	Cynoglossus_semilaevis
ENSXETG00000013137	fubp1	95	55.226	ENSCVAG00000001873	khsrp	70	58.225	Cyprinodon_variegatus
ENSXETG00000013137	fubp1	59	58.537	ENSDARG00000026489	khsrp	100	56.828	Danio_rerio
ENSXETG00000013137	fubp1	93	62.500	ENSDNOG00000046507	KHSRP	56	67.453	Dasypus_novemcinctus
ENSXETG00000013137	fubp1	100	88.537	ENSDNOG00000013200	-	100	88.537	Dasypus_novemcinctus
ENSXETG00000013137	fubp1	93	54.823	ENSDORG00000002447	Khsrp	63	66.410	Dipodomys_ordii
ENSXETG00000013137	fubp1	93	55.309	ENSETEG00000004793	KHSRP	65	58.945	Echinops_telfairi
ENSXETG00000013137	fubp1	95	62.675	ENSEASG00005023114	KHSRP	61	67.040	Equus_asinus_asinus
ENSXETG00000013137	fubp1	100	87.970	ENSEASG00005016990	-	100	87.970	Equus_asinus_asinus
ENSXETG00000013137	fubp1	95	62.675	ENSECAG00000018305	KHSRP	61	67.040	Equus_caballus
ENSXETG00000013137	fubp1	100	88.120	ENSECAG00000010867	FUBP1	100	88.120	Equus_caballus
ENSXETG00000013137	fubp1	78	53.145	ENSELUG00000016310	khsrp	79	57.746	Esox_lucius
ENSXETG00000013137	fubp1	98	53.256	ENSELUG00000008445	-	72	57.676	Esox_lucius
ENSXETG00000013137	fubp1	100	88.253	ENSFCAG00000010330	-	100	88.253	Felis_catus
ENSXETG00000013137	fubp1	95	62.305	ENSFCAG00000003731	KHSRP	62	67.040	Felis_catus
ENSXETG00000013137	fubp1	61	52.913	ENSFDAG00000010889	KHSRP	92	74.419	Fukomys_damarensis
ENSXETG00000013137	fubp1	97	53.687	ENSGAFG00000010469	khsrp	70	58.170	Gambusia_affinis
ENSXETG00000013137	fubp1	95	55.896	ENSGACG00000012422	KHSRP	65	61.712	Gasterosteus_aculeatus
ENSXETG00000013137	fubp1	98	51.908	ENSGACG00000018990	khsrp	64	58.242	Gasterosteus_aculeatus
ENSXETG00000013137	fubp1	68	90.244	ENSGAGG00000019219	-	68	90.423	Gopherus_agassizii
ENSXETG00000013137	fubp1	64	68.998	ENSGAGG00000023246	KHSRP	68	65.236	Gopherus_agassizii
ENSXETG00000013137	fubp1	93	61.807	ENSGGOG00000007028	KHSRP	81	65.893	Gorilla_gorilla
ENSXETG00000013137	fubp1	100	85.714	ENSGGOG00000027554	FUBP1	100	85.714	Gorilla_gorilla
ENSXETG00000013137	fubp1	98	54.006	ENSHBUG00000018543	khsrp	71	58.280	Haplochromis_burtoni
ENSXETG00000013137	fubp1	96	53.707	ENSHBUG00000014760	KHSRP	70	58.368	Haplochromis_burtoni
ENSXETG00000013137	fubp1	95	62.481	ENSHGLG00000013239	KHSRP	62	66.667	Heterocephalus_glaber_female
ENSXETG00000013137	fubp1	80	47.523	ENSHGLG00100000480	KHSRP	69	52.392	Heterocephalus_glaber_male
ENSXETG00000013137	fubp1	97	52.639	ENSHCOG00000020488	khsrp	70	57.267	Hippocampus_comes
ENSXETG00000013137	fubp1	93	62.282	ENSSTOG00000002371	KHSRP	63	67.376	Ictidomys_tridecemlineatus
ENSXETG00000013137	fubp1	95	60.964	ENSJJAG00000006370	Khsrp	58	65.471	Jaculus_jaculus
ENSXETG00000013137	fubp1	97	53.799	ENSKMAG00000018579	khsrp	69	58.170	Kryptolebias_marmoratus
ENSXETG00000013137	fubp1	84	54.561	ENSLBEG00000005191	khsrp	62	64.167	Labrus_bergylta
ENSXETG00000013137	fubp1	95	57.674	ENSLACG00000002072	KHSRP	63	60.998	Latimeria_chalumnae
ENSXETG00000013137	fubp1	95	84.751	ENSLACG00000012547	-	97	84.751	Latimeria_chalumnae
ENSXETG00000013137	fubp1	96	56.881	ENSLOCG00000006229	khsrp	63	63.830	Lepisosteus_oculatus
ENSXETG00000013137	fubp1	93	61.648	ENSLAFG00000002426	KHSRP	70	66.903	Loxodonta_africana
ENSXETG00000013137	fubp1	92	61.378	ENSMFAG00000000292	KHSRP	67	64.551	Macaca_fascicularis
ENSXETG00000013137	fubp1	95	57.698	ENSMMUG00000005597	KHSRP	64	66.437	Macaca_mulatta
ENSXETG00000013137	fubp1	95	58.870	ENSMNEG00000036982	KHSRP	75	72.340	Macaca_nemestrina
ENSXETG00000013137	fubp1	93	61.807	ENSMLEG00000030501	KHSRP	67	66.430	Mandrillus_leucophaeus
ENSXETG00000013137	fubp1	99	85.693	ENSMLEG00000032973	-	100	85.577	Mandrillus_leucophaeus
ENSXETG00000013137	fubp1	97	54.354	ENSMAMG00000011746	khsrp	68	60.480	Mastacembelus_armatus
ENSXETG00000013137	fubp1	96	49.813	ENSMZEG00005022974	-	85	74.194	Maylandia_zebra
ENSXETG00000013137	fubp1	96	53.707	ENSMZEG00005011227	KHSRP	70	58.368	Maylandia_zebra
ENSXETG00000013137	fubp1	93	59.271	ENSMAUG00000018966	Khsrp	60	66.903	Mesocricetus_auratus
ENSXETG00000013137	fubp1	100	88.253	ENSMICG00000014463	-	98	85.542	Microcebus_murinus
ENSXETG00000013137	fubp1	95	62.016	ENSMICG00000007863	KHSRP	70	66.592	Microcebus_murinus
ENSXETG00000013137	fubp1	93	57.054	ENSMOCG00000018305	Khsrp	78	67.136	Microtus_ochrogaster
ENSXETG00000013137	fubp1	88	67.347	ENSMMOG00000005097	-	83	54.353	Mola_mola
ENSXETG00000013137	fubp1	53	52.941	ENSMMOG00000021381	-	100	52.941	Mola_mola
ENSXETG00000013137	fubp1	93	60.285	ENSMODG00000001952	KHSRP	63	64.858	Monodelphis_domestica
ENSXETG00000013137	fubp1	97	48.788	ENSMALG00000006104	khsrp	92	53.007	Monopterus_albus
ENSXETG00000013137	fubp1	95	56.094	MGP_CAROLIEiJ_G0021800	Khsrp	71	60.819	Mus_caroli
ENSXETG00000013137	fubp1	95	62.053	ENSMUSG00000007670	Khsrp	68	68.712	Mus_musculus
ENSXETG00000013137	fubp1	95	62.053	MGP_PahariEiJ_G0020789	Khsrp	59	67.040	Mus_pahari
ENSXETG00000013137	fubp1	95	62.053	MGP_SPRETEiJ_G0022711	Khsrp	59	67.040	Mus_spretus
ENSXETG00000013137	fubp1	99	88.218	ENSMPUG00000010799	-	96	88.218	Mustela_putorius_furo
ENSXETG00000013137	fubp1	94	61.417	ENSMPUG00000006615	KHSRP	61	65.728	Mustela_putorius_furo
ENSXETG00000013137	fubp1	93	61.807	ENSMLUG00000015543	KHSRP	63	67.376	Myotis_lucifugus
ENSXETG00000013137	fubp1	95	61.371	ENSNGAG00000023093	Khsrp	59	65.919	Nannospalax_galili
ENSXETG00000013137	fubp1	96	53.787	ENSNBRG00000005876	KHSRP	68	59.140	Neolamprologus_brichardi
ENSXETG00000013137	fubp1	98	52.006	ENSNBRG00000023797	khsrp	68	59.121	Neolamprologus_brichardi
ENSXETG00000013137	fubp1	97	58.615	ENSNLEG00000015923	KHSRP	81	61.384	Nomascus_leucogenys
ENSXETG00000013137	fubp1	77	59.542	ENSMEUG00000016601	KHSRP	71	62.884	Notamacropus_eugenii
ENSXETG00000013137	fubp1	95	58.165	ENSOPRG00000010594	-	60	60.948	Ochotona_princeps
ENSXETG00000013137	fubp1	95	51.589	ENSODEG00000015021	KHSRP	64	56.635	Octodon_degus
ENSXETG00000013137	fubp1	67	56.723	ENSONIG00000002163	KHSRP	69	58.368	Oreochromis_niloticus
ENSXETG00000013137	fubp1	98	56.006	ENSONIG00000017713	khsrp	69	59.698	Oreochromis_niloticus
ENSXETG00000013137	fubp1	88	57.756	ENSOANG00000000261	KHSRP	80	63.256	Ornithorhynchus_anatinus
ENSXETG00000013137	fubp1	63	68.308	ENSOCUG00000026747	-	95	68.750	Oryctolagus_cuniculus
ENSXETG00000013137	fubp1	98	87.227	ENSOCUG00000002225	-	98	86.977	Oryctolagus_cuniculus
ENSXETG00000013137	fubp1	97	54.882	ENSORLG00000011882	khsrp	68	58.065	Oryzias_latipes
ENSXETG00000013137	fubp1	97	50.966	ENSORLG00020005284	khsrp	68	54.803	Oryzias_latipes_hni
ENSXETG00000013137	fubp1	97	54.723	ENSORLG00015003791	khsrp	70	60.175	Oryzias_latipes_hsok
ENSXETG00000013137	fubp1	98	54.030	ENSOMEG00000013233	khsrp	69	60.088	Oryzias_melastigma
ENSXETG00000013137	fubp1	95	62.364	ENSOGAG00000008073	KHSRP	62	67.040	Otolemur_garnettii
ENSXETG00000013137	fubp1	75	62.970	ENSOARG00000005881	KHSRP	84	67.136	Ovis_aries
ENSXETG00000013137	fubp1	99	85.693	ENSPPAG00000038243	-	100	84.535	Pan_paniscus
ENSXETG00000013137	fubp1	92	61.440	ENSPPAG00000036395	-	77	66.906	Pan_paniscus
ENSXETG00000013137	fubp1	88	59.933	ENSPPAG00000036398	-	70	67.376	Pan_paniscus
ENSXETG00000013137	fubp1	89	56.908	ENSPPRG00000008001	KHSRP	57	62.143	Panthera_pardus
ENSXETG00000013137	fubp1	100	85.714	ENSPTRG00000000888	FUBP1	100	85.714	Pan_troglodytes
ENSXETG00000013137	fubp1	95	61.705	ENSPTRG00000010364	KHSRP	74	65.639	Pan_troglodytes
ENSXETG00000013137	fubp1	95	62.208	ENSPANG00000000103	KHSRP	62	67.040	Papio_anubis
ENSXETG00000013137	fubp1	100	85.843	ENSPANG00000004797	-	100	85.843	Papio_anubis
ENSXETG00000013137	fubp1	99	71.976	ENSPKIG00000009065	-	64	76.351	Paramormyrops_kingsleyae
ENSXETG00000013137	fubp1	97	51.704	ENSPKIG00000003200	khsrp	67	56.584	Paramormyrops_kingsleyae
ENSXETG00000013137	fubp1	90	65.306	ENSPMGG00000016443	khsrp	88	65.306	Periophthalmus_magnuspinnatus
ENSXETG00000013137	fubp1	93	57.480	ENSPEMG00000022853	Khsrp	62	67.139	Peromyscus_maniculatus_bairdii
ENSXETG00000013137	fubp1	100	87.746	ENSPCIG00000022984	-	100	87.746	Phascolarctos_cinereus
ENSXETG00000013137	fubp1	95	62.830	ENSPCIG00000025516	KHSRP	62	66.815	Phascolarctos_cinereus
ENSXETG00000013137	fubp1	98	52.778	ENSPFOG00000004577	khsrp	70	58.170	Poecilia_formosa
ENSXETG00000013137	fubp1	93	54.041	ENSPPYG00000019172	-	68	58.454	Pongo_abelii
ENSXETG00000013137	fubp1	93	59.618	ENSPPYG00000009454	KHSRP	81	64.602	Pongo_abelii
ENSXETG00000013137	fubp1	76	54.951	ENSPCAG00000000246	KHSRP	78	57.399	Procavia_capensis
ENSXETG00000013137	fubp1	92	61.859	ENSPCOG00000027506	KHSRP	68	64.551	Propithecus_coquereli
ENSXETG00000013137	fubp1	95	58.476	ENSPVAG00000007251	KHSRP	61	61.883	Pteropus_vampyrus
ENSXETG00000013137	fubp1	96	50.746	ENSPNYG00000014008	KHSRP	65	58.531	Pundamilia_nyererei
ENSXETG00000013137	fubp1	98	53.582	ENSPNYG00000001374	khsrp	70	58.351	Pundamilia_nyererei
ENSXETG00000013137	fubp1	95	54.780	ENSPNAG00000012026	khsrp	93	60.377	Pygocentrus_nattereri
ENSXETG00000013137	fubp1	95	62.053	ENSRNOG00000047628	Khsrp	61	67.040	Rattus_norvegicus
ENSXETG00000013137	fubp1	92	56.869	ENSRBIG00000041605	KHSRP	66	60.192	Rhinopithecus_bieti
ENSXETG00000013137	fubp1	95	62.208	ENSRROG00000031782	KHSRP	68	63.333	Rhinopithecus_roxellana
ENSXETG00000013137	fubp1	93	61.807	ENSSBOG00000034871	KHSRP	81	66.588	Saimiri_boliviensis_boliviensis
ENSXETG00000013137	fubp1	90	62.418	ENSSHAG00000011383	KHSRP	62	67.574	Sarcophilus_harrisii
ENSXETG00000013137	fubp1	75	58.065	ENSSMAG00000012166	KHSRP	70	56.751	Scophthalmus_maximus
ENSXETG00000013137	fubp1	75	66.000	ENSSMAG00000004167	khsrp	80	57.143	Scophthalmus_maximus
ENSXETG00000013137	fubp1	98	53.157	ENSSDUG00000002110	KHSRP	70	59.579	Seriola_dumerili
ENSXETG00000013137	fubp1	98	53.157	ENSSLDG00000025625	KHSRP	70	59.579	Seriola_lalandi_dorsalis
ENSXETG00000013137	fubp1	98	61.493	ENSSPUG00000016462	KHSRP	64	66.817	Sphenodon_punctatus
ENSXETG00000013137	fubp1	97	52.301	ENSSPAG00000008349	khsrp	70	59.013	Stegastes_partitus
ENSXETG00000013137	fubp1	95	62.830	ENSSSCG00000013538	KHSRP	59	69.337	Sus_scrofa
ENSXETG00000013137	fubp1	99	88.066	ENSSSCG00000003771	-	100	87.282	Sus_scrofa
ENSXETG00000013137	fubp1	98	51.355	ENSTNIG00000014067	khsrp	68	58.691	Tetraodon_nigroviridis
ENSXETG00000013137	fubp1	93	61.041	ENSTTRG00000010390	KHSRP	62	65.247	Tursiops_truncatus
ENSXETG00000013137	fubp1	84	61.538	ENSUAMG00000023100	KHSRP	52	67.898	Ursus_americanus
ENSXETG00000013137	fubp1	100	88.532	ENSUAMG00000004961	-	100	90.418	Ursus_americanus
ENSXETG00000013137	fubp1	100	85.423	ENSUMAG00000006022	-	100	85.423	Ursus_maritimus
ENSXETG00000013137	fubp1	93	57.845	ENSUMAG00000011144	KHSRP	58	61.321	Ursus_maritimus
ENSXETG00000013137	fubp1	60	61.918	ENSVPAG00000010837	-	100	61.370	Vicugna_pacos
ENSXETG00000013137	fubp1	94	59.720	ENSVVUG00000026737	KHSRP	59	69.337	Vulpes_vulpes
ENSXETG00000013137	fubp1	99	88.218	ENSVVUG00000030003	-	100	85.547	Vulpes_vulpes
ENSXETG00000013137	fubp1	98	53.333	ENSXCOG00000014443	khsrp	68	58.170	Xiphophorus_couchianus
ENSXETG00000013137	fubp1	98	53.148	ENSXMAG00000012876	khsrp	70	57.952	Xiphophorus_maculatus