EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000013204 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: Xenopus tropicalis tRNA methyltransferase 13 homolog (S. cerevisiae) (trmt13)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 9210 bases
Position: chrGL172721.1:511496-520705
Accession: NM_001195675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000004632	TRM13	PF05206.14	1.5e-84	1	1
ENSXETP00000028911	TRM13	PF05206.14	1.6e-84	1	1
ENSXETP00000004632	zf-U11-48K	PF05253.12	3.7e-10	1	1
ENSXETP00000028911	zf-U11-48K	PF05253.12	3.8e-10	1	1
ENSXETP00000004632	zf-TRM13_CCCH	PF11722.8	7.1e-12	1	1
ENSXETP00000028911	zf-TRM13_CCCH	PF11722.8	7.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000004632	-	2106	-	ENSXETP00000004632	454 (aa)	-	F6Q3V5
ENSXETT00000028911	-	2257	-	ENSXETP00000028911	464 (aa)	-	F7EU89

Gene Model

Click here to download ENSXETG00000013204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013204	trmt13	96	56.371	ENSG00000122435	TRMT13	96	56.115	Homo_sapiens
ENSXETG00000013204	trmt13	97	48.361	ENSAPOG00000015131	trmt13	99	48.247	Acanthochromis_polyacanthus
ENSXETG00000013204	trmt13	97	57.569	ENSAMEG00000008917	TRMT13	96	57.692	Ailuropoda_melanoleuca
ENSXETG00000013204	trmt13	98	49.892	ENSACIG00000005804	trmt13	96	50.540	Amphilophus_citrinellus
ENSXETG00000013204	trmt13	97	47.967	ENSAOCG00000023585	trmt13	99	48.163	Amphiprion_ocellaris
ENSXETG00000013204	trmt13	97	48.367	ENSAPEG00000004025	trmt13	99	48.566	Amphiprion_percula
ENSXETG00000013204	trmt13	98	50.649	ENSATEG00000006597	trmt13	98	50.649	Anabas_testudineus
ENSXETG00000013204	trmt13	88	60.192	ENSAPLG00000014924	TRMT13	98	60.192	Anas_platyrhynchos
ENSXETG00000013204	trmt13	98	55.652	ENSACAG00000003498	TRMT13	98	55.652	Anolis_carolinensis
ENSXETG00000013204	trmt13	96	56.371	ENSANAG00000019525	TRMT13	91	65.657	Aotus_nancymaae
ENSXETG00000013204	trmt13	97	51.648	ENSACLG00000020018	trmt13	99	51.648	Astatotilapia_calliptera
ENSXETG00000013204	trmt13	97	51.404	ENSAMXG00000017963	trmt13	98	52.165	Astyanax_mexicanus
ENSXETG00000013204	trmt13	96	56.550	ENSBTAG00000015781	TRMT13	95	56.550	Bos_taurus
ENSXETG00000013204	trmt13	96	56.371	ENSCJAG00000000200	TRMT13	89	67.176	Callithrix_jacchus
ENSXETG00000013204	trmt13	63	56.721	ENSCAFG00000020021	TRMT13	96	56.721	Canis_familiaris
ENSXETG00000013204	trmt13	61	58.511	ENSCAFG00020011572	TRMT13	97	58.511	Canis_lupus_dingo
ENSXETG00000013204	trmt13	97	57.479	ENSCHIG00000015395	TRMT13	97	57.479	Capra_hircus
ENSXETG00000013204	trmt13	96	55.338	ENSTSYG00000010811	TRMT13	86	67.816	Carlito_syrichta
ENSXETG00000013204	trmt13	73	44.928	ENSCAPG00000009085	TRMT13	95	46.957	Cavia_aperea
ENSXETG00000013204	trmt13	99	56.624	ENSCPOG00000000694	TRMT13	98	56.624	Cavia_porcellus
ENSXETG00000013204	trmt13	96	56.587	ENSCCAG00000023772	TRMT13	91	65.657	Cebus_capucinus
ENSXETG00000013204	trmt13	96	56.371	ENSCATG00000033556	TRMT13	91	66.667	Cercocebus_atys
ENSXETG00000013204	trmt13	87	54.676	ENSCLAG00000008220	TRMT13	98	56.341	Chinchilla_lanigera
ENSXETG00000013204	trmt13	96	55.940	ENSCSAG00000001506	TRMT13	96	55.794	Chlorocebus_sabaeus
ENSXETG00000013204	trmt13	99	58.351	ENSCPBG00000026671	TRMT13	98	58.351	Chrysemys_picta_bellii
ENSXETG00000013204	trmt13	96	56.156	ENSCANG00000034659	TRMT13	91	65.657	Colobus_angolensis_palliatus
ENSXETG00000013204	trmt13	96	56.550	ENSCGRG00001021601	Trmt13	95	56.550	Cricetulus_griseus_chok1gshd
ENSXETG00000013204	trmt13	50	52.823	ENSCGRG00000000093	-	96	52.823	Cricetulus_griseus_crigri
ENSXETG00000013204	trmt13	99	52.423	ENSCSEG00000000591	trmt13	99	52.423	Cynoglossus_semilaevis
ENSXETG00000013204	trmt13	98	50.644	ENSCVAG00000017342	trmt13	94	51.168	Cyprinodon_variegatus
ENSXETG00000013204	trmt13	99	54.605	ENSDARG00000102846	trmt13	98	54.605	Danio_rerio
ENSXETG00000013204	trmt13	60	58.065	ENSDNOG00000001710	TRMT13	85	58.065	Dasypus_novemcinctus
ENSXETG00000013204	trmt13	99	55.319	ENSDORG00000015808	Trmt13	98	55.319	Dipodomys_ordii
ENSXETG00000013204	trmt13	97	35.652	FBgn0037435	CG18048	95	35.870	Drosophila_melanogaster
ENSXETG00000013204	trmt13	96	50.216	ENSETEG00000005819	TRMT13	96	50.216	Echinops_telfairi
ENSXETG00000013204	trmt13	96	45.556	ENSEBUG00000014444	trmt13	96	45.556	Eptatretus_burgeri
ENSXETG00000013204	trmt13	99	56.263	ENSEASG00005015918	TRMT13	98	56.263	Equus_asinus_asinus
ENSXETG00000013204	trmt13	99	56.263	ENSECAG00000022626	TRMT13	98	56.263	Equus_caballus
ENSXETG00000013204	trmt13	77	68.519	ENSEEUG00000000294	TRMT13	76	68.519	Erinaceus_europaeus
ENSXETG00000013204	trmt13	97	52.391	ENSELUG00000003803	trmt13	98	53.159	Esox_lucius
ENSXETG00000013204	trmt13	99	55.202	ENSFCAG00000030618	TRMT13	98	55.634	Felis_catus
ENSXETG00000013204	trmt13	99	58.836	ENSFALG00000002424	TRMT13	98	58.836	Ficedula_albicollis
ENSXETG00000013204	trmt13	99	55.626	ENSFDAG00000006342	TRMT13	98	55.626	Fukomys_damarensis
ENSXETG00000013204	trmt13	78	54.011	ENSFHEG00000022954	trmt13	99	51.870	Fundulus_heteroclitus
ENSXETG00000013204	trmt13	96	50.572	ENSGMOG00000013223	trmt13	100	50.112	Gadus_morhua
ENSXETG00000013204	trmt13	96	59.645	ENSGALG00000005290	TRMT13	98	59.483	Gallus_gallus
ENSXETG00000013204	trmt13	78	53.533	ENSGAFG00000001577	trmt13	82	53.533	Gambusia_affinis
ENSXETG00000013204	trmt13	98	52.308	ENSGACG00000013428	trmt13	98	52.308	Gasterosteus_aculeatus
ENSXETG00000013204	trmt13	99	58.228	ENSGAGG00000023303	TRMT13	98	64.234	Gopherus_agassizii
ENSXETG00000013204	trmt13	96	56.156	ENSGGOG00000005616	TRMT13	86	68.085	Gorilla_gorilla
ENSXETG00000013204	trmt13	97	51.528	ENSHBUG00000007754	trmt13	99	51.528	Haplochromis_burtoni
ENSXETG00000013204	trmt13	99	55.158	ENSHGLG00000002164	TRMT13	97	55.158	Heterocephalus_glaber_female
ENSXETG00000013204	trmt13	99	55.158	ENSHGLG00100001618	TRMT13	97	55.158	Heterocephalus_glaber_male
ENSXETG00000013204	trmt13	96	50.000	ENSHCOG00000020553	trmt13	96	50.448	Hippocampus_comes
ENSXETG00000013204	trmt13	99	53.057	ENSIPUG00000024787	trmt13	99	53.595	Ictalurus_punctatus
ENSXETG00000013204	trmt13	97	55.864	ENSSTOG00000013483	TRMT13	98	55.864	Ictidomys_tridecemlineatus
ENSXETG00000013204	trmt13	96	55.556	ENSJJAG00000018012	Trmt13	96	55.556	Jaculus_jaculus
ENSXETG00000013204	trmt13	63	51.724	ENSKMAG00000007639	trmt13	92	51.724	Kryptolebias_marmoratus
ENSXETG00000013204	trmt13	97	51.502	ENSLBEG00000020238	trmt13	99	51.820	Labrus_bergylta
ENSXETG00000013204	trmt13	96	58.862	ENSLACG00000013153	TRMT13	99	57.360	Latimeria_chalumnae
ENSXETG00000013204	trmt13	97	57.330	ENSLOCG00000000418	trmt13	97	57.582	Lepisosteus_oculatus
ENSXETG00000013204	trmt13	76	53.719	ENSLAFG00000002383	TRMT13	98	53.719	Loxodonta_africana
ENSXETG00000013204	trmt13	96	56.156	ENSMFAG00000034681	TRMT13	91	65.657	Macaca_fascicularis
ENSXETG00000013204	trmt13	96	56.156	ENSMMUG00000004243	TRMT13	91	65.657	Macaca_mulatta
ENSXETG00000013204	trmt13	96	56.156	ENSMNEG00000036102	TRMT13	91	65.657	Macaca_nemestrina
ENSXETG00000013204	trmt13	96	56.371	ENSMLEG00000034258	TRMT13	91	66.667	Mandrillus_leucophaeus
ENSXETG00000013204	trmt13	99	51.931	ENSMAMG00000016597	trmt13	97	51.931	Mastacembelus_armatus
ENSXETG00000013204	trmt13	97	51.429	ENSMZEG00005020959	trmt13	99	51.429	Maylandia_zebra
ENSXETG00000013204	trmt13	89	59.330	ENSMGAG00000006970	TRMT13	99	59.330	Meleagris_gallopavo
ENSXETG00000013204	trmt13	96	55.508	ENSMAUG00000010448	Trmt13	95	55.508	Mesocricetus_auratus
ENSXETG00000013204	trmt13	96	57.205	ENSMICG00000005283	TRMT13	88	67.708	Microcebus_murinus
ENSXETG00000013204	trmt13	99	55.437	ENSMOCG00000019914	Trmt13	98	55.437	Microtus_ochrogaster
ENSXETG00000013204	trmt13	57	49.064	ENSMMOG00000007762	trmt13	90	49.434	Mola_mola
ENSXETG00000013204	trmt13	99	53.862	ENSMODG00000003646	TRMT13	98	53.862	Monodelphis_domestica
ENSXETG00000013204	trmt13	97	52.252	ENSMALG00000020965	trmt13	98	52.183	Monopterus_albus
ENSXETG00000013204	trmt13	99	55.626	MGP_CAROLIEiJ_G0025568	Trmt13	79	80.000	Mus_caroli
ENSXETG00000013204	trmt13	99	55.839	ENSMUSG00000033439	Trmt13	75	83.333	Mus_musculus
ENSXETG00000013204	trmt13	99	55.414	MGP_PahariEiJ_G0027014	Trmt13	83	76.923	Mus_pahari
ENSXETG00000013204	trmt13	99	55.839	MGP_SPRETEiJ_G0026518	Trmt13	75	83.333	Mus_spretus
ENSXETG00000013204	trmt13	77	55.041	ENSMPUG00000002078	-	97	55.041	Mustela_putorius_furo
ENSXETG00000013204	trmt13	99	54.158	ENSMLUG00000002124	TRMT13	98	54.158	Myotis_lucifugus
ENSXETG00000013204	trmt13	97	47.702	ENSNBRG00000006783	trmt13	96	48.124	Neolamprologus_brichardi
ENSXETG00000013204	trmt13	96	55.940	ENSNLEG00000035917	TRMT13	88	66.667	Nomascus_leucogenys
ENSXETG00000013204	trmt13	51	52.766	ENSMEUG00000013346	-	95	52.766	Notamacropus_eugenii
ENSXETG00000013204	trmt13	65	72.500	ENSOPRG00000012048	TRMT13	63	72.500	Ochotona_princeps
ENSXETG00000013204	trmt13	97	51.528	ENSONIG00000004574	trmt13	99	51.528	Oreochromis_niloticus
ENSXETG00000013204	trmt13	89	57.075	ENSOANG00000012057	TRMT13	98	57.075	Ornithorhynchus_anatinus
ENSXETG00000013204	trmt13	99	55.224	ENSOCUG00000023095	TRMT13	98	55.224	Oryctolagus_cuniculus
ENSXETG00000013204	trmt13	98	48.472	ENSORLG00000003320	trmt13	99	48.584	Oryzias_latipes
ENSXETG00000013204	trmt13	98	48.899	ENSORLG00020005972	trmt13	98	48.451	Oryzias_latipes_hni
ENSXETG00000013204	trmt13	98	52.298	ENSORLG00015002270	trmt13	99	52.298	Oryzias_latipes_hsok
ENSXETG00000013204	trmt13	98	52.070	ENSOMEG00000006724	trmt13	94	52.747	Oryzias_melastigma
ENSXETG00000013204	trmt13	96	56.332	ENSOGAG00000005618	TRMT13	93	56.182	Otolemur_garnettii
ENSXETG00000013204	trmt13	97	57.479	ENSOARG00000017983	TRMT13	97	57.479	Ovis_aries
ENSXETG00000013204	trmt13	96	55.940	ENSPPAG00000043736	TRMT13	95	55.940	Pan_paniscus
ENSXETG00000013204	trmt13	96	56.550	ENSPPRG00000003424	TRMT13	98	55.634	Panthera_pardus
ENSXETG00000013204	trmt13	96	56.550	ENSPTIG00000018598	TRMT13	98	55.634	Panthera_tigris_altaica
ENSXETG00000013204	trmt13	96	56.156	ENSPTRG00000001001	TRMT13	95	56.156	Pan_troglodytes
ENSXETG00000013204	trmt13	96	56.156	ENSPANG00000007598	TRMT13	91	65.657	Papio_anubis
ENSXETG00000013204	trmt13	96	55.111	ENSPKIG00000001514	trmt13	97	55.111	Paramormyrops_kingsleyae
ENSXETG00000013204	trmt13	87	56.429	ENSPSIG00000012703	TRMT13	99	56.429	Pelodiscus_sinensis
ENSXETG00000013204	trmt13	97	53.111	ENSPMGG00000013298	trmt13	93	53.468	Periophthalmus_magnuspinnatus
ENSXETG00000013204	trmt13	98	57.511	ENSPEMG00000000275	Trmt13	97	57.511	Peromyscus_maniculatus_bairdii
ENSXETG00000013204	trmt13	97	46.764	ENSPMAG00000000823	trmt13	100	46.421	Petromyzon_marinus
ENSXETG00000013204	trmt13	97	56.833	ENSPCIG00000007699	TRMT13	97	57.112	Phascolarctos_cinereus
ENSXETG00000013204	trmt13	98	52.412	ENSPFOG00000008675	trmt13	96	52.412	Poecilia_formosa
ENSXETG00000013204	trmt13	97	51.416	ENSPLAG00000009709	trmt13	99	51.641	Poecilia_latipinna
ENSXETG00000013204	trmt13	97	51.092	ENSPMEG00000022954	trmt13	99	51.316	Poecilia_mexicana
ENSXETG00000013204	trmt13	78	53.659	ENSPREG00000005645	trmt13	94	52.962	Poecilia_reticulata
ENSXETG00000013204	trmt13	96	56.304	ENSPPYG00000001120	TRMT13	95	56.304	Pongo_abelii
ENSXETG00000013204	trmt13	96	55.677	ENSPCAG00000002340	TRMT13	96	55.531	Procavia_capensis
ENSXETG00000013204	trmt13	96	56.332	ENSPCOG00000017984	TRMT13	91	65.657	Propithecus_coquereli
ENSXETG00000013204	trmt13	99	56.383	ENSPVAG00000017430	TRMT13	98	56.383	Pteropus_vampyrus
ENSXETG00000013204	trmt13	97	50.218	ENSPNYG00000013690	trmt13	99	50.218	Pundamilia_nyererei
ENSXETG00000013204	trmt13	97	52.954	ENSPNAG00000022130	trmt13	98	53.187	Pygocentrus_nattereri
ENSXETG00000013204	trmt13	99	55.626	ENSRNOG00000015140	Trmt13	95	55.626	Rattus_norvegicus
ENSXETG00000013204	trmt13	96	56.156	ENSRBIG00000037686	TRMT13	91	65.657	Rhinopithecus_bieti
ENSXETG00000013204	trmt13	96	56.156	ENSRROG00000044057	TRMT13	91	65.657	Rhinopithecus_roxellana
ENSXETG00000013204	trmt13	95	30.346	YOL125W	-	95	30.346	Saccharomyces_cerevisiae
ENSXETG00000013204	trmt13	96	55.940	ENSSBOG00000026541	TRMT13	91	65.657	Saimiri_boliviensis_boliviensis
ENSXETG00000013204	trmt13	89	56.876	ENSSHAG00000005213	TRMT13	94	56.876	Sarcophilus_harrisii
ENSXETG00000013204	trmt13	98	54.867	ENSSFOG00015017560	trmt13	98	55.088	Scleropages_formosus
ENSXETG00000013204	trmt13	98	51.948	ENSSMAG00000014592	trmt13	96	51.948	Scophthalmus_maximus
ENSXETG00000013204	trmt13	98	50.964	ENSSDUG00000015508	trmt13	96	51.392	Seriola_dumerili
ENSXETG00000013204	trmt13	98	50.964	ENSSLDG00000019060	trmt13	96	51.188	Seriola_lalandi_dorsalis
ENSXETG00000013204	trmt13	99	51.599	ENSSARG00000010344	TRMT13	98	51.599	Sorex_araneus
ENSXETG00000013204	trmt13	95	57.018	ENSSPUG00000016339	TRMT13	98	57.018	Sphenodon_punctatus
ENSXETG00000013204	trmt13	96	51.770	ENSSPAG00000011922	trmt13	97	51.770	Stegastes_partitus
ENSXETG00000013204	trmt13	97	56.087	ENSSSCG00000006869	TRMT13	96	56.182	Sus_scrofa
ENSXETG00000013204	trmt13	96	59.071	ENSTGUG00000005253	TRMT13	98	59.071	Taeniopygia_guttata
ENSXETG00000013204	trmt13	96	49.015	ENSTRUG00000008400	trmt13	98	48.802	Takifugu_rubripes
ENSXETG00000013204	trmt13	72	56.962	ENSTBEG00000008911	TRMT13	83	56.962	Tupaia_belangeri
ENSXETG00000013204	trmt13	99	54.316	ENSUAMG00000017251	TRMT13	98	54.316	Ursus_americanus
ENSXETG00000013204	trmt13	97	57.388	ENSUMAG00000007901	TRMT13	97	57.377	Ursus_maritimus
ENSXETG00000013204	trmt13	74	79.167	ENSVPAG00000001034	TRMT13	83	79.167	Vicugna_pacos
ENSXETG00000013204	trmt13	98	56.559	ENSVVUG00000021996	TRMT13	96	57.050	Vulpes_vulpes
ENSXETG00000013204	trmt13	96	52.097	ENSXMAG00000010765	trmt13	99	52.097	Xiphophorus_maculatus