EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000013525 (Gene tree)
Gene ID: -
Gene Symbol: zmat4
Alias: -
Full Name: zinc finger matrin-type 4
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 20841 bases
Position: chrGL172848.1:278592-299432
Accession: XB-GENE-1219111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000029630	zf-U1	PF06220.12	2.3e-07	1	1
ENSXETP00000010906	zf-U1	PF06220.12	2.5e-07	1	1
ENSXETP00000029630	zf-met	PF12874.7	6.6e-15	1	2
ENSXETP00000029630	zf-met	PF12874.7	6.6e-15	2	2
ENSXETP00000010906	zf-met	PF12874.7	6.8e-15	1	2
ENSXETP00000010906	zf-met	PF12874.7	6.8e-15	2	2
ENSXETP00000029630	zf-C2H2_jaz	PF12171.8	6.4e-10	1	1
ENSXETP00000010906	zf-C2H2_jaz	PF12171.8	6.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000010906	-	468	-	ENSXETP00000010906	156 (aa)	-	L7N2S7
ENSXETT00000029630	-	456	-	ENSXETP00000029630	152 (aa)	-	F6TDP9

Gene Model

Click here to download ENSXETG00000013525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000013525	zmat4	93	31.361	ENSXETG00000007251	zmat3	70	31.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013525	zmat4	83	63.566	ENSAPOG00000019970	zgc:171482	83	61.151	Acanthochromis_polyacanthus
ENSXETG00000013525	zmat4	76	91.111	ENSACIG00000021512	zgc:171482	73	91.111	Amphilophus_citrinellus
ENSXETG00000013525	zmat4	75	90.909	ENSAOCG00000000751	zgc:171482	71	90.909	Amphiprion_ocellaris
ENSXETG00000013525	zmat4	75	68.657	ENSAPEG00000014154	zgc:171482	86	68.657	Amphiprion_percula
ENSXETG00000013525	zmat4	83	60.000	ENSATEG00000001371	zgc:171482	84	60.294	Anabas_testudineus
ENSXETG00000013525	zmat4	76	76.786	ENSACLG00000010511	zgc:171482	76	76.786	Astatotilapia_calliptera
ENSXETG00000013525	zmat4	76	79.245	ENSAMXG00000002299	zgc:171482	79	79.245	Astyanax_mexicanus
ENSXETG00000013525	zmat4	89	50.000	ENSCSEG00000006509	zgc:171482	88	50.000	Cynoglossus_semilaevis
ENSXETG00000013525	zmat4	83	63.359	ENSCVAG00000013606	zgc:171482	84	60.993	Cyprinodon_variegatus
ENSXETG00000013525	zmat4	77	79.245	ENSDARG00000074415	zgc:171482	78	79.245	Danio_rerio
ENSXETG00000013525	zmat4	78	88.889	ENSELUG00000021817	zgc:171482	69	88.889	Esox_lucius
ENSXETG00000013525	zmat4	76	76.786	ENSFHEG00000002233	zgc:171482	78	76.786	Fundulus_heteroclitus
ENSXETG00000013525	zmat4	84	60.606	ENSGMOG00000010508	zgc:171482	84	58.451	Gadus_morhua
ENSXETG00000013525	zmat4	76	91.111	ENSGAFG00000009398	zgc:171482	88	50.000	Gambusia_affinis
ENSXETG00000013525	zmat4	83	62.406	ENSGACG00000007680	zgc:171482	84	60.140	Gasterosteus_aculeatus
ENSXETG00000013525	zmat4	75	88.889	ENSHBUG00000023289	zgc:171482	74	88.889	Haplochromis_burtoni
ENSXETG00000013525	zmat4	80	87.755	ENSHCOG00000018086	zgc:171482	76	87.755	Hippocampus_comes
ENSXETG00000013525	zmat4	77	77.358	ENSIPUG00000000361	zgc:171482	83	69.841	Ictalurus_punctatus
ENSXETG00000013525	zmat4	89	58.696	ENSKMAG00000005077	zgc:171482	72	58.696	Kryptolebias_marmoratus
ENSXETG00000013525	zmat4	76	77.586	ENSLBEG00000023823	zgc:171482	79	77.586	Labrus_bergylta
ENSXETG00000013525	zmat4	90	58.571	ENSLOCG00000008863	zgc:171482	81	58.571	Lepisosteus_oculatus
ENSXETG00000013525	zmat4	75	91.111	ENSMAMG00000001031	zgc:171482	62	91.111	Mastacembelus_armatus
ENSXETG00000013525	zmat4	83	62.500	ENSMZEG00005027721	zgc:171482	84	60.145	Maylandia_zebra
ENSXETG00000013525	zmat4	75	88.889	ENSMMOG00000010523	zgc:171482	75	88.889	Mola_mola
ENSXETG00000013525	zmat4	83	61.832	ENSMALG00000017883	zgc:171482	84	62.143	Monopterus_albus
ENSXETG00000013525	zmat4	78	86.957	ENSNBRG00000021035	zgc:171482	74	86.957	Neolamprologus_brichardi
ENSXETG00000013525	zmat4	83	60.432	ENSONIG00000018365	zgc:171482	83	58.621	Oreochromis_niloticus
ENSXETG00000013525	zmat4	76	91.111	ENSORLG00000007607	zgc:171482	75	83.333	Oryzias_latipes
ENSXETG00000013525	zmat4	76	88.889	ENSORLG00020003563	zgc:171482	75	81.481	Oryzias_latipes_hni
ENSXETG00000013525	zmat4	76	91.111	ENSORLG00015008552	zgc:171482	75	83.333	Oryzias_latipes_hsok
ENSXETG00000013525	zmat4	92	85.185	ENSOMEG00000003526	zgc:171482	87	85.185	Oryzias_melastigma
ENSXETG00000013525	zmat4	69	90.698	ENSPKIG00000016244	zgc:171482	75	81.481	Paramormyrops_kingsleyae
ENSXETG00000013525	zmat4	82	83.019	ENSPKIG00000015911	-	72	83.019	Paramormyrops_kingsleyae
ENSXETG00000013525	zmat4	89	56.579	ENSPMGG00000020230	zgc:171482	85	56.579	Periophthalmus_magnuspinnatus
ENSXETG00000013525	zmat4	83	60.284	ENSPFOG00000001974	zgc:171482	82	58.278	Poecilia_formosa
ENSXETG00000013525	zmat4	83	65.116	ENSPLAG00000003327	zgc:171482	83	62.590	Poecilia_latipinna
ENSXETG00000013525	zmat4	76	78.571	ENSPMEG00000004988	zgc:171482	83	61.654	Poecilia_mexicana
ENSXETG00000013525	zmat4	79	87.500	ENSPREG00000019241	zgc:171482	73	87.500	Poecilia_reticulata
ENSXETG00000013525	zmat4	76	76.786	ENSPNYG00000007773	zgc:171482	76	76.786	Pundamilia_nyererei
ENSXETG00000013525	zmat4	90	58.333	ENSPNAG00000007619	zgc:171482	82	58.333	Pygocentrus_nattereri
ENSXETG00000013525	zmat4	80	80.769	ENSSFOG00015016149	zgc:171482	83	80.769	Scleropages_formosus
ENSXETG00000013525	zmat4	83	79.245	ENSSFOG00015021238	zgc:171482	78	70.312	Scleropages_formosus
ENSXETG00000013525	zmat4	76	76.786	ENSSMAG00000002715	zgc:171482	70	76.786	Scophthalmus_maximus
ENSXETG00000013525	zmat4	87	76.786	ENSSDUG00000008773	zgc:171482	80	76.786	Seriola_dumerili
ENSXETG00000013525	zmat4	88	76.786	ENSSLDG00000019510	zgc:171482	82	76.786	Seriola_lalandi_dorsalis
ENSXETG00000013525	zmat4	75	91.111	ENSSPAG00000013724	zgc:171482	78	91.111	Stegastes_partitus
ENSXETG00000013525	zmat4	95	73.016	ENSTRUG00000005705	zgc:171482	85	73.016	Takifugu_rubripes
ENSXETG00000013525	zmat4	89	61.429	ENSTNIG00000008679	zgc:171482	84	61.429	Tetraodon_nigroviridis
ENSXETG00000013525	zmat4	72	92.308	ENSXMAG00000002641	zgc:171482	88	47.959	Xiphophorus_maculatus