EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXETG00000013538 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
-
Full Name
Xenopus tropicalis replication protein A1 (rpa1)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Plus strand
Length
30766 bases
Position
chrGL172903.1:192465-223230
Accession
NM_001015732
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000029655tRNA_anti-codonPF01336.259e-1111
ENSXETP00000063755tRNA_anti-codonPF01336.259.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000061177-2979-ENSXETP00000063755623 (aa)-F7EL02
ENSXETT00000029655-2937XM_018091223ENSXETP00000029655609 (aa)XP_017946712Q5FW17
Gene Model
Click here to download ENSXETG00000013538's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013538's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000013538rpa19966.612ENSAPOG00000011658rpa19965.391Acanthochromis_polyacanthus
ENSXETG00000013538rpa19960.121ENSAPOG00000019409RPA17965.138Acanthochromis_polyacanthus
ENSXETG00000013538rpa19972.565ENSAMEG00000007706RPA19972.078Ailuropoda_melanoleuca
ENSXETG00000013538rpa19562.093ENSACIG00000007277rpa19960.642Amphilophus_citrinellus
ENSXETG00000013538rpa19560.884ENSACIG00000012881RPA19959.694Amphilophus_citrinellus
ENSXETG00000013538rpa19967.049ENSAOCG00000023376rpa110066.261Amphiprion_ocellaris
ENSXETG00000013538rpa19956.105ENSAOCG00000009003RPA19955.796Amphiprion_ocellaris
ENSXETG00000013538rpa19954.532ENSAPEG00000019132RPA18465.837Amphiprion_percula
ENSXETG00000013538rpa19966.721ENSAPEG00000008634rpa19965.913Amphiprion_percula
ENSXETG00000013538rpa19956.173ENSATEG00000006443RPA18566.515Anabas_testudineus
ENSXETG00000013538rpa19468.348ENSATEG00000022024rpa110067.993Anabas_testudineus
ENSXETG00000013538rpa19761.424ENSAPLG00000012442RPA110050.740Anas_platyrhynchos
ENSXETG00000013538rpa19963.399ENSACAG00000014490RPA19963.399Anolis_carolinensis
ENSXETG00000013538rpa19774.667ENSANAG00000023456RPA19974.247Aotus_nancymaae
ENSXETG00000013538rpa19958.658ENSACLG00000005223RPA19957.788Astatotilapia_calliptera
ENSXETG00000013538rpa19367.311ENSACLG00000006640rpa19967.663Astatotilapia_calliptera
ENSXETG00000013538rpa19966.722ENSAMXG00000008418rpa19966.612Astyanax_mexicanus
ENSXETG00000013538rpa19975.654ENSBTAG00000009711RPA19974.632Bos_taurus
ENSXETG00000013538rpa18130.452WBGene00017546rpa-16731.330Caenorhabditis_elegans
ENSXETG00000013538rpa19973.322ENSCJAG00000001848RPA19972.995Callithrix_jacchus
ENSXETG00000013538rpa19974.468ENSCAFG00000019249RPA19973.065Canis_familiaris
ENSXETG00000013538rpa19974.468ENSCAFG00020009847RPA19973.065Canis_lupus_dingo
ENSXETG00000013538rpa19975.450ENSCHIG00000026308RPA19975.286Capra_hircus
ENSXETG00000013538rpa19973.486ENSTSYG00000003482-9972.831Carlito_syrichta
ENSXETG00000013538rpa19973.127ENSCPOG00000000035RPA19972.668Cavia_porcellus
ENSXETG00000013538rpa19962.378ENSCCAG00000010981RPA19962.052Cebus_capucinus
ENSXETG00000013538rpa19969.885ENSCLAG00000015045-9969.180Chinchilla_lanigera
ENSXETG00000013538rpa19973.856ENSCLAG00000005185-9972.995Chinchilla_lanigera
ENSXETG00000013538rpa19963.192ENSCSAG00000013833RPA19963.518Chlorocebus_sabaeus
ENSXETG00000013538rpa17278.947ENSCHOG00000009454-9978.719Choloepus_hoffmanni
ENSXETG00000013538rpa19572.014ENSCHOG00000013540-9970.470Choloepus_hoffmanni
ENSXETG00000013538rpa19973.115ENSCPBG00000020377RPA19973.333Chrysemys_picta_bellii
ENSXETG00000013538rpa19843.811ENSCING00000023482-9943.615Ciona_intestinalis
ENSXETG00000013538rpa19772.727ENSCANG00000030911RPA19972.559Colobus_angolensis_palliatus
ENSXETG00000013538rpa19873.573ENSCGRG00001008197Rpa19971.961Cricetulus_griseus_chok1gshd
ENSXETG00000013538rpa18172.727ENSCGRG00000000582Rpa18977.263Cricetulus_griseus_crigri
ENSXETG00000013538rpa19952.313ENSCSEG00000012726RPA19953.425Cynoglossus_semilaevis
ENSXETG00000013538rpa19964.484ENSCSEG00000013066rpa19962.783Cynoglossus_semilaevis
ENSXETG00000013538rpa19967.273ENSCVAG00000019431rpa110067.496Cyprinodon_variegatus
ENSXETG00000013538rpa19455.329ENSCVAG00000013446-7767.920Cyprinodon_variegatus
ENSXETG00000013538rpa19967.053ENSDARG00000003938rpa19966.722Danio_rerio
ENSXETG00000013538rpa19874.548ENSDNOG00000017218RPA19973.684Dasypus_novemcinctus
ENSXETG00000013538rpa19975.123ENSDORG00000006199Rpa19974.754Dipodomys_ordii
ENSXETG00000013538rpa19942.301FBgn0010173RpA-709942.122Drosophila_melanogaster
ENSXETG00000013538rpa18280.412ENSETEG00000017608RPA18280.412Echinops_telfairi
ENSXETG00000013538rpa19776.254ENSEASG00005009372RPA19680.851Equus_asinus_asinus
ENSXETG00000013538rpa19976.230ENSECAG00000023886RPA19975.410Equus_caballus
ENSXETG00000013538rpa16979.236ENSEEUG00000002186-6878.998Erinaceus_europaeus
ENSXETG00000013538rpa19966.118ENSELUG00000021071rpa19966.010Esox_lucius
ENSXETG00000013538rpa18857.728ENSELUG00000006136RPA19957.728Esox_lucius
ENSXETG00000013538rpa19973.039ENSFCAG00000006306RPA19972.177Felis_catus
ENSXETG00000013538rpa19971.498ENSFALG00000006575RPA19969.870Ficedula_albicollis
ENSXETG00000013538rpa19975.450ENSFDAG00000007720RPA19974.918Fukomys_damarensis
ENSXETG00000013538rpa19966.116ENSFHEG00000003580rpa19965.620Fundulus_heteroclitus
ENSXETG00000013538rpa19964.511ENSGMOG00000010382rpa19964.013Gadus_morhua
ENSXETG00000013538rpa19969.579ENSGALG00000003072RPA19969.417Gallus_gallus
ENSXETG00000013538rpa19966.113ENSGAFG00000012916rpa19964.648Gambusia_affinis
ENSXETG00000013538rpa19956.288ENSGAFG00000020953RPA19954.878Gambusia_affinis
ENSXETG00000013538rpa19964.959ENSGACG00000010856rpa19963.097Gasterosteus_aculeatus
ENSXETG00000013538rpa19973.443ENSGAGG00000013611RPA19973.443Gopherus_agassizii
ENSXETG00000013538rpa19972.893ENSGGOG00000014186RPA19972.727Gorilla_gorilla
ENSXETG00000013538rpa19967.715ENSHBUG00000017773rpa19966.124Haplochromis_burtoni
ENSXETG00000013538rpa19655.574ENSHBUG00000009348RPA19955.161Haplochromis_burtoni
ENSXETG00000013538rpa19974.098ENSHGLG00000008846RPA19973.770Heterocephalus_glaber_female
ENSXETG00000013538rpa19974.098ENSHGLG00100017755-9973.770Heterocephalus_glaber_male
ENSXETG00000013538rpa19963.054ENSHGLG00100002005-9962.890Heterocephalus_glaber_male
ENSXETG00000013538rpa19970.049ENSHGLG00100000799-9969.344Heterocephalus_glaber_male
ENSXETG00000013538rpa19963.934ENSHCOG00000001401rpa19963.149Hippocampus_comes
ENSXETG00000013538rpa19943.934ENSHCOG00000000351RPA19843.607Hippocampus_comes
ENSXETG00000013538rpa19965.008ENSIPUG00000004400rpa19963.754Ictalurus_punctatus
ENSXETG00000013538rpa19667.993ENSSTOG00000022475RPA19767.110Ictidomys_tridecemlineatus
ENSXETG00000013538rpa19573.935ENSJJAG00000000876Rpa19873.424Jaculus_jaculus
ENSXETG00000013538rpa19957.119ENSKMAG00000000234RPA19956.774Kryptolebias_marmoratus
ENSXETG00000013538rpa19965.113ENSKMAG00000005605rpa19965.260Kryptolebias_marmoratus
ENSXETG00000013538rpa19967.822ENSLBEG00000021604rpa19967.438Labrus_bergylta
ENSXETG00000013538rpa19964.350ENSLBEG00000002281RPA18564.206Labrus_bergylta
ENSXETG00000013538rpa18166.206ENSLACG00000007210RPA19867.835Latimeria_chalumnae
ENSXETG00000013538rpa19969.193ENSLOCG00000006397rpa110068.464Lepisosteus_oculatus
ENSXETG00000013538rpa19972.756ENSLAFG00000015354RPA110071.132Loxodonta_africana
ENSXETG00000013538rpa18173.653ENSMFAG00000036138-9974.052Macaca_fascicularis
ENSXETG00000013538rpa19968.317ENSMMUG00000002442-9968.152Macaca_mulatta
ENSXETG00000013538rpa19774.457ENSMMUG00000011604-9974.791Macaca_mulatta
ENSXETG00000013538rpa19971.967ENSMNEG00000031632-9972.295Macaca_nemestrina
ENSXETG00000013538rpa18672.707ENSMNEG00000029837-9772.489Macaca_nemestrina
ENSXETG00000013538rpa19769.601ENSMLEG00000038768-9969.103Mandrillus_leucophaeus
ENSXETG00000013538rpa19967.603ENSMAMG00000017993rpa19966.957Mastacembelus_armatus
ENSXETG00000013538rpa19665.197ENSMAMG00000020097RPA18264.465Mastacembelus_armatus
ENSXETG00000013538rpa19958.658ENSMZEG00005024731RPA19957.788Maylandia_zebra
ENSXETG00000013538rpa19968.212ENSMZEG00005007551rpa19966.612Maylandia_zebra
ENSXETG00000013538rpa19969.268ENSMGAG00000005315RPA19969.106Meleagris_gallopavo
ENSXETG00000013538rpa19673.993ENSMAUG00000010474Rpa19973.211Mesocricetus_auratus
ENSXETG00000013538rpa19874.056ENSMICG00000012867RPA19973.520Microcebus_murinus
ENSXETG00000013538rpa19874.220ENSMOCG00000013019Rpa19973.355Microtus_ochrogaster
ENSXETG00000013538rpa19859.664ENSMMOG00000010868RPA19864.494Mola_mola
ENSXETG00000013538rpa19667.918ENSMMOG00000014292rpa19966.891Mola_mola
ENSXETG00000013538rpa19973.486ENSMODG00000010549RPA19972.668Monodelphis_domestica
ENSXETG00000013538rpa19964.220ENSMALG00000001208RPA18364.220Monopterus_albus
ENSXETG00000013538rpa19967.107ENSMALG00000011453rpa19966.502Monopterus_albus
ENSXETG00000013538rpa19874.304MGP_CAROLIEiJ_G0016734Rpa19972.995Mus_caroli
ENSXETG00000013538rpa19872.771ENSMUSG00000000751Rpa19971.129Mus_musculus
ENSXETG00000013538rpa19874.430MGP_PahariEiJ_G0017871Rpa19972.934Mus_pahari
ENSXETG00000013538rpa19872.816MGP_SPRETEiJ_G0017577Rpa19971.521Mus_spretus
ENSXETG00000013538rpa19974.632ENSMPUG00000013119RPA19973.021Mustela_putorius_furo
ENSXETG00000013538rpa19972.565ENSMLUG00000006113RPA19971.429Myotis_lucifugus
ENSXETG00000013538rpa19574.490ENSNGAG00000004522Rpa19771.176Nannospalax_galili
ENSXETG00000013538rpa19467.073ENSNBRG00000020595rpa19967.422Neolamprologus_brichardi
ENSXETG00000013538rpa19957.049ENSNBRG00000009672RPA19856.814Neolamprologus_brichardi
ENSXETG00000013538rpa19974.098ENSNLEG00000017149RPA19972.903Nomascus_leucogenys
ENSXETG00000013538rpa19764.942ENSMEUG00000006714RPA19964.942Notamacropus_eugenii
ENSXETG00000013538rpa19572.454ENSODEG00000009038RPA19671.477Octodon_degus
ENSXETG00000013538rpa19967.647ENSONIG00000013135rpa19967.647Oreochromis_niloticus
ENSXETG00000013538rpa19774.210ENSOANG00000010880RPA19972.831Ornithorhynchus_anatinus
ENSXETG00000013538rpa19972.360ENSOCUG00000001504RPA19971.139Oryctolagus_cuniculus
ENSXETG00000013538rpa19954.908ENSORLG00000003368RPA19954.448Oryzias_latipes
ENSXETG00000013538rpa19967.055ENSORLG00000004856rpa19965.203Oryzias_latipes
ENSXETG00000013538rpa19953.916ENSORLG00020015284RPA19364.270Oryzias_latipes_hni
ENSXETG00000013538rpa19967.221ENSORLG00020008980rpa19965.147Oryzias_latipes_hni
ENSXETG00000013538rpa19967.221ENSORLG00015013982rpa19965.147Oryzias_latipes_hsok
ENSXETG00000013538rpa16863.923ENSORLG00015005867-9463.923Oryzias_latipes_hsok
ENSXETG00000013538rpa19955.625ENSORLG00015020383RPA19955.156Oryzias_latipes_hsok
ENSXETG00000013538rpa19854.106ENSOMEG00000011040RPA110057.317Oryzias_melastigma
ENSXETG00000013538rpa19964.238ENSOMEG00000004704rpa19961.526Oryzias_melastigma
ENSXETG00000013538rpa19973.486ENSOGAG00000005581-9972.787Otolemur_garnettii
ENSXETG00000013538rpa19369.504ENSOGAG00000029379-9680.925Otolemur_garnettii
ENSXETG00000013538rpa19975.450ENSOARG00000014479RPA19975.286Ovis_aries
ENSXETG00000013538rpa19974.426ENSPPAG00000039680RPA19973.115Pan_paniscus
ENSXETG00000013538rpa19973.203ENSPPRG00000011807RPA19972.340Panthera_pardus
ENSXETG00000013538rpa19972.876ENSPTIG00000007898RPA19972.013Panthera_tigris_altaica
ENSXETG00000013538rpa19974.426ENSPTRG00000008539RPA19973.115Pan_troglodytes
ENSXETG00000013538rpa19974.141ENSPANG00000024592RPA19974.468Papio_anubis
ENSXETG00000013538rpa19963.115ENSPKIG00000008053rpa19962.951Paramormyrops_kingsleyae
ENSXETG00000013538rpa19772.213ENSPSIG00000015617RPA19972.213Pelodiscus_sinensis
ENSXETG00000013538rpa19459.375ENSPMGG00000000543RPA19959.754Periophthalmus_magnuspinnatus
ENSXETG00000013538rpa19966.392ENSPMGG00000011589rpa19966.063Periophthalmus_magnuspinnatus
ENSXETG00000013538rpa19874.548ENSPEMG00000021061Rpa19973.520Peromyscus_maniculatus_bairdii
ENSXETG00000013538rpa19972.831ENSPCIG00000019049RPA19973.159Phascolarctos_cinereus
ENSXETG00000013538rpa19966.998ENSPFOG00000003987rpa19966.611Poecilia_formosa
ENSXETG00000013538rpa19966.833ENSPLAG00000004984rpa19966.445Poecilia_latipinna
ENSXETG00000013538rpa19356.260ENSPLAG00000008844-9655.412Poecilia_latipinna
ENSXETG00000013538rpa19966.998ENSPMEG00000020602rpa110066.372Poecilia_mexicana
ENSXETG00000013538rpa19355.825ENSPMEG00000003627-9654.766Poecilia_mexicana
ENSXETG00000013538rpa19954.844ENSPREG00000010119RPA18167.356Poecilia_reticulata
ENSXETG00000013538rpa19259.964ENSPREG00000010174rpa19658.448Poecilia_reticulata
ENSXETG00000013538rpa19874.056ENSPCOG00000001799RPA19973.520Propithecus_coquereli
ENSXETG00000013538rpa19974.262ENSPVAG00000002149RPA19972.903Pteropus_vampyrus
ENSXETG00000013538rpa19967.881ENSPNYG00000016316rpa19967.601Pundamilia_nyererei
ENSXETG00000013538rpa19958.346ENSPNYG00000024165RPA19957.477Pundamilia_nyererei
ENSXETG00000013538rpa19957.353ENSPNAG00000008599rpa19659.792Pygocentrus_nattereri
ENSXETG00000013538rpa19677.184ENSRNOG00000003123Rpa19973.849Rattus_norvegicus
ENSXETG00000013538rpa19973.813ENSRBIG00000036587RPA19973.650Rhinopithecus_bieti
ENSXETG00000013538rpa19968.903ENSRROG00000043278RPA19968.576Rhinopithecus_roxellana
ENSXETG00000013538rpa16837.116YAR007CRFA16836.879Saccharomyces_cerevisiae
ENSXETG00000013538rpa19769.565ENSSBOG00000030233RPA19969.231Saimiri_boliviensis_boliviensis
ENSXETG00000013538rpa19872.623ENSSHAG00000007969RPA19872.787Sarcophilus_harrisii
ENSXETG00000013538rpa19967.384ENSSFOG00015005362rpa19266.833Scleropages_formosus
ENSXETG00000013538rpa19954.325ENSSMAG00000019746RPA18366.284Scophthalmus_maximus
ENSXETG00000013538rpa19968.595ENSSDUG00000011949rpa19967.045Seriola_dumerili
ENSXETG00000013538rpa19961.431ENSSDUG00000016358RPA18167.202Seriola_dumerili
ENSXETG00000013538rpa19968.760ENSSLDG00000011806rpa19967.208Seriola_lalandi_dorsalis
ENSXETG00000013538rpa19960.630ENSSLDG00000020784RPA18066.972Seriola_lalandi_dorsalis
ENSXETG00000013538rpa18678.788ENSSARG00000007506RPA19959.437Sorex_araneus
ENSXETG00000013538rpa19671.235ENSSPUG00000007223RPA19970.678Sphenodon_punctatus
ENSXETG00000013538rpa19967.934ENSSPAG00000009903rpa19966.396Stegastes_partitus
ENSXETG00000013538rpa19858.170ENSSPAG00000011165RPA19958.961Stegastes_partitus
ENSXETG00000013538rpa19973.762ENSSSCG00000017822RPA19973.597Sus_scrofa
ENSXETG00000013538rpa19970.820ENSTGUG00000005775RPA19970.425Taeniopygia_guttata
ENSXETG00000013538rpa19264.802ENSTRUG00000000405RPA17962.528Takifugu_rubripes
ENSXETG00000013538rpa19966.941ENSTRUG00000003616rpa110065.534Takifugu_rubripes
ENSXETG00000013538rpa19969.005ENSTNIG00000016199rpa19969.836Tetraodon_nigroviridis
ENSXETG00000013538rpa17884.211ENSTBEG00000002709RPA18084.211Tupaia_belangeri
ENSXETG00000013538rpa19973.813ENSTTRG00000001169RPA19973.108Tursiops_truncatus
ENSXETG00000013538rpa18784.615ENSUAMG00000015676RPA19684.615Ursus_americanus
ENSXETG00000013538rpa19973.770ENSUMAG00000009328RPA19973.770Ursus_maritimus
ENSXETG00000013538rpa19872.951ENSVPAG00000009443RPA19972.085Vicugna_pacos
ENSXETG00000013538rpa19974.304ENSVVUG00000021715RPA19973.607Vulpes_vulpes
ENSXETG00000013538rpa19264.550ENSXCOG00000010068rpa19464.260Xiphophorus_couchianus
ENSXETG00000013538rpa19557.886ENSXCOG00000009899-9957.659Xiphophorus_couchianus
ENSXETG00000013538rpa19965.672ENSXMAG00000004102rpa110066.607Xiphophorus_maculatus
ENSXETG00000013538rpa19166.667ENSXMAG00000010333RPA17866.667Xiphophorus_maculatus

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