EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000013633 (Gene tree)
Gene ID: -
Gene Symbol: rab30
Alias: -
Full Name: Xenopus tropicalis RAB30%2C member RAS oncogene family (rab30)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 40127 bases
Position: chrGL173546.1:132579-172705
Accession: NM_001006108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000029860	MMR_HSR1	PF01926.23	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000029860	-	1354	-	ENSXETP00000029860	203 (aa)	XP_012812167	Q6GL94

Gene Model

Click here to download ENSXETG00000013633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000013633	rab30	86	42.529	ENSXETG00000002305	rab5a	81	42.529
ENSXETG00000013633	rab30	89	42.935	ENSXETG00000020622	rab39a	89	42.935
ENSXETG00000013633	rab30	79	52.174	ENSXETG00000004289	rab12	52	52.174
ENSXETG00000013633	rab30	87	48.588	ENSXETG00000011370	rab35	88	48.588
ENSXETG00000013633	rab30	77	32.278	ENSXETG00000007760	rap2b	93	33.529
ENSXETG00000013633	rab30	90	34.783	ENSXETG00000004449	rab23	77	34.783
ENSXETG00000013633	rab30	95	37.374	ENSXETG00000013345	rab9a	97	37.374
ENSXETG00000013633	rab30	98	36.816	ENSXETG00000008055	rab3b	94	37.306
ENSXETG00000013633	rab30	84	33.714	ENSXETG00000022517	rerg	84	33.714
ENSXETG00000013633	rab30	62	48.000	ENSXETG00000020729	rab13	78	48.000
ENSXETG00000013633	rab30	81	49.405	ENSXETG00000016920	rab33b	73	49.405
ENSXETG00000013633	rab30	78	36.646	ENSXETG00000005944	rab7b	80	36.646
ENSXETG00000013633	rab30	79	45.342	ENSXETG00000002201	rab15	76	45.342
ENSXETG00000013633	rab30	77	36.875	ENSXETG00000019257	rab34	62	36.875
ENSXETG00000013633	rab30	78	35.220	ENSXETG00000003398	kras	84	35.443
ENSXETG00000013633	rab30	83	47.929	ENSXETG00000004556	rab18	82	47.929
ENSXETG00000013633	rab30	90	40.000	ENSXETG00000014257	mgc75872	95	40.000
ENSXETG00000013633	rab30	80	52.695	ENSXETG00000018183	rab33a	78	52.695
ENSXETG00000013633	rab30	87	34.270	ENSXETG00000021449	nras	92	34.270
ENSXETG00000013633	rab30	82	51.205	ENSXETG00000014011	rab1a	83	51.205
ENSXETG00000013633	rab30	89	34.973	ENSXETG00000006040	hras	94	34.973
ENSXETG00000013633	rab30	86	49.714	ENSXETG00000026943	rab35	86	49.714
ENSXETG00000013633	rab30	79	42.857	ENSXETG00000023200	rab6a	85	42.857
ENSXETG00000013633	rab30	89	37.222	ENSXETG00000031363	-	78	37.222
ENSXETG00000013633	rab30	83	33.929	ENSXETG00000015712	rabl2b	72	33.929
ENSXETG00000013633	rab30	67	32.857	ENSXETG00000003868	nkiras1	95	32.857
ENSXETG00000013633	rab30	78	34.591	ENSXETG00000014935	ralb	83	34.810
ENSXETG00000013633	rab30	79	39.759	ENSXETG00000018133	rab9b	82	39.759
ENSXETG00000013633	rab30	97	40.476	ENSXETG00000021890	rab11b.2	95	40.476
ENSXETG00000013633	rab30	79	42.236	ENSXETG00000030938	rab41	76	42.236
ENSXETG00000013633	rab30	97	40.758	ENSXETG00000025484	rab11b.1	95	40.758
ENSXETG00000013633	rab30	85	38.202	ENSXETG00000016176	rab7a	86	38.202
ENSXETG00000013633	rab30	97	38.462	ENSXETG00000006639	rab11a	96	38.462
ENSXETG00000013633	rab30	87	47.753	ENSXETG00000017184	rab2b	83	47.753
ENSXETG00000013633	rab30	97	40.000	ENSXETG00000020404	rab25	96	40.000
ENSXETG00000013633	rab30	78	48.447	ENSXETG00000032443	RAB39B	76	48.447
ENSXETG00000013633	rab30	81	36.145	ENSXETG00000005505	MRAS	79	36.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013633	rab30	100	93.103	ENSG00000137502	RAB30	100	98.182	Homo_sapiens
ENSXETG00000013633	rab30	100	85.222	ENSAPOG00000022625	rab30	100	85.222	Acanthochromis_polyacanthus
ENSXETG00000013633	rab30	100	93.103	ENSAMEG00000005231	RAB30	100	93.103	Ailuropoda_melanoleuca
ENSXETG00000013633	rab30	95	85.492	ENSAOCG00000012556	rab30	69	85.492	Amphiprion_ocellaris
ENSXETG00000013633	rab30	100	85.222	ENSAPEG00000012044	rab30	100	85.222	Amphiprion_percula
ENSXETG00000013633	rab30	100	84.729	ENSATEG00000010475	rab30	100	84.729	Anabas_testudineus
ENSXETG00000013633	rab30	100	91.626	ENSACAG00000001098	RAB30	100	91.626	Anolis_carolinensis
ENSXETG00000013633	rab30	100	93.103	ENSANAG00000029292	RAB30	100	93.103	Aotus_nancymaae
ENSXETG00000013633	rab30	100	85.222	ENSACLG00000023526	rab30	100	85.222	Astatotilapia_calliptera
ENSXETG00000013633	rab30	100	83.744	ENSAMXG00000009935	rab30	82	83.744	Astyanax_mexicanus
ENSXETG00000013633	rab30	100	93.103	ENSBTAG00000002417	RAB30	100	93.103	Bos_taurus
ENSXETG00000013633	rab30	98	57.820	WBGene00004282	rab-30	98	57.820	Caenorhabditis_elegans
ENSXETG00000013633	rab30	100	93.103	ENSCJAG00000041773	RAB30	100	93.103	Callithrix_jacchus
ENSXETG00000013633	rab30	100	93.103	ENSCAFG00000004616	RAB30	100	93.103	Canis_familiaris
ENSXETG00000013633	rab30	100	93.103	ENSCAFG00020017865	RAB30	100	93.103	Canis_lupus_dingo
ENSXETG00000013633	rab30	100	93.103	ENSCHIG00000020601	RAB30	100	93.103	Capra_hircus
ENSXETG00000013633	rab30	100	93.103	ENSTSYG00000009392	RAB30	100	93.103	Carlito_syrichta
ENSXETG00000013633	rab30	100	93.103	ENSCAPG00000009331	RAB30	100	93.103	Cavia_aperea
ENSXETG00000013633	rab30	100	93.103	ENSCPOG00000005047	RAB30	100	93.103	Cavia_porcellus
ENSXETG00000013633	rab30	100	93.103	ENSCCAG00000026824	RAB30	100	93.103	Cebus_capucinus
ENSXETG00000013633	rab30	100	93.103	ENSCATG00000040441	RAB30	100	93.103	Cercocebus_atys
ENSXETG00000013633	rab30	100	93.103	ENSCLAG00000014030	RAB30	100	93.103	Chinchilla_lanigera
ENSXETG00000013633	rab30	100	93.103	ENSCSAG00000003704	RAB30	100	93.103	Chlorocebus_sabaeus
ENSXETG00000013633	rab30	100	93.103	ENSCPBG00000006855	RAB30	100	93.103	Chrysemys_picta_bellii
ENSXETG00000013633	rab30	100	92.611	ENSCANG00000022240	RAB30	100	92.611	Colobus_angolensis_palliatus
ENSXETG00000013633	rab30	100	93.103	ENSCGRG00001021787	Rab30	100	93.103	Cricetulus_griseus_chok1gshd
ENSXETG00000013633	rab30	100	93.103	ENSCGRG00000014842	Rab30	100	93.103	Cricetulus_griseus_crigri
ENSXETG00000013633	rab30	100	83.744	ENSCSEG00000007292	rab30	100	83.744	Cynoglossus_semilaevis
ENSXETG00000013633	rab30	100	83.744	ENSCVAG00000018085	rab30	100	83.744	Cyprinodon_variegatus
ENSXETG00000013633	rab30	99	84.577	ENSDARG00000037884	rab30	100	84.577	Danio_rerio
ENSXETG00000013633	rab30	100	93.103	ENSDNOG00000039115	RAB30	100	93.103	Dasypus_novemcinctus
ENSXETG00000013633	rab30	100	92.118	ENSDORG00000010504	-	100	92.118	Dipodomys_ordii
ENSXETG00000013633	rab30	100	90.148	ENSDORG00000015066	-	100	90.148	Dipodomys_ordii
ENSXETG00000013633	rab30	85	75.145	FBgn0031882	Rab30	77	75.145	Drosophila_melanogaster
ENSXETG00000013633	rab30	100	93.103	ENSEASG00005012754	RAB30	100	93.103	Equus_asinus_asinus
ENSXETG00000013633	rab30	100	93.103	ENSECAG00000022769	RAB30	100	93.103	Equus_caballus
ENSXETG00000013633	rab30	100	84.804	ENSELUG00000022997	rab30	100	85.644	Esox_lucius
ENSXETG00000013633	rab30	100	93.103	ENSFCAG00000014416	RAB30	100	93.103	Felis_catus
ENSXETG00000013633	rab30	100	91.626	ENSFALG00000007765	RAB30	100	91.626	Ficedula_albicollis
ENSXETG00000013633	rab30	100	93.103	ENSFDAG00000014521	RAB30	100	93.103	Fukomys_damarensis
ENSXETG00000013633	rab30	100	84.236	ENSFHEG00000013918	rab30	100	84.236	Fundulus_heteroclitus
ENSXETG00000013633	rab30	100	81.773	ENSGMOG00000002552	rab30	100	81.773	Gadus_morhua
ENSXETG00000013633	rab30	100	91.626	ENSGALG00000017248	RAB30	100	91.626	Gallus_gallus
ENSXETG00000013633	rab30	100	83.744	ENSGAFG00000020309	rab30	100	83.744	Gambusia_affinis
ENSXETG00000013633	rab30	100	85.714	ENSGACG00000012006	rab30	100	85.714	Gasterosteus_aculeatus
ENSXETG00000013633	rab30	100	93.103	ENSGAGG00000004474	RAB30	100	93.103	Gopherus_agassizii
ENSXETG00000013633	rab30	100	93.103	ENSGGOG00000017157	RAB30	100	93.103	Gorilla_gorilla
ENSXETG00000013633	rab30	100	85.222	ENSHBUG00000000993	rab30	93	85.222	Haplochromis_burtoni
ENSXETG00000013633	rab30	100	93.103	ENSHGLG00000002759	RAB30	100	93.103	Heterocephalus_glaber_female
ENSXETG00000013633	rab30	100	93.103	ENSHGLG00100001213	RAB30	100	93.103	Heterocephalus_glaber_male
ENSXETG00000013633	rab30	66	89.474	ENSHCOG00000010707	rab30	71	89.474	Hippocampus_comes
ENSXETG00000013633	rab30	99	85.572	ENSIPUG00000021010	Rab30	100	85.572	Ictalurus_punctatus
ENSXETG00000013633	rab30	100	93.103	ENSSTOG00000020966	RAB30	100	93.103	Ictidomys_tridecemlineatus
ENSXETG00000013633	rab30	100	93.103	ENSJJAG00000020064	Rab30	100	93.103	Jaculus_jaculus
ENSXETG00000013633	rab30	100	85.222	ENSKMAG00000004439	rab30	100	85.222	Kryptolebias_marmoratus
ENSXETG00000013633	rab30	100	84.729	ENSLBEG00000001146	rab30	100	84.729	Labrus_bergylta
ENSXETG00000013633	rab30	100	91.133	ENSLACG00000006407	RAB30	100	91.133	Latimeria_chalumnae
ENSXETG00000013633	rab30	100	88.177	ENSLOCG00000005884	rab30	100	88.177	Lepisosteus_oculatus
ENSXETG00000013633	rab30	100	92.611	ENSLAFG00000010711	RAB30	100	92.611	Loxodonta_africana
ENSXETG00000013633	rab30	100	93.103	ENSMFAG00000033119	RAB30	100	93.103	Macaca_fascicularis
ENSXETG00000013633	rab30	100	93.103	ENSMMUG00000007842	RAB30	100	93.103	Macaca_mulatta
ENSXETG00000013633	rab30	100	93.103	ENSMNEG00000037406	RAB30	100	93.103	Macaca_nemestrina
ENSXETG00000013633	rab30	100	93.103	ENSMLEG00000039496	RAB30	100	93.103	Mandrillus_leucophaeus
ENSXETG00000013633	rab30	100	84.729	ENSMAMG00000011973	rab30	100	84.729	Mastacembelus_armatus
ENSXETG00000013633	rab30	100	85.222	ENSMZEG00005024032	rab30	93	85.222	Maylandia_zebra
ENSXETG00000013633	rab30	100	90.686	ENSMGAG00000015230	RAB30	100	90.686	Meleagris_gallopavo
ENSXETG00000013633	rab30	100	93.103	ENSMAUG00000008179	Rab30	100	93.103	Mesocricetus_auratus
ENSXETG00000013633	rab30	100	93.103	ENSMICG00000012002	RAB30	100	93.103	Microcebus_murinus
ENSXETG00000013633	rab30	100	93.103	ENSMOCG00000009821	-	100	93.103	Microtus_ochrogaster
ENSXETG00000013633	rab30	100	84.729	ENSMMOG00000000304	rab30	100	84.729	Mola_mola
ENSXETG00000013633	rab30	100	93.103	ENSMODG00000004506	RAB30	100	93.103	Monodelphis_domestica
ENSXETG00000013633	rab30	100	85.222	ENSMALG00000010438	rab30	100	85.222	Monopterus_albus
ENSXETG00000013633	rab30	100	92.611	MGP_CAROLIEiJ_G0029992	Rab30	100	92.611	Mus_caroli
ENSXETG00000013633	rab30	100	93.103	ENSMUSG00000030643	Rab30	100	98.131	Mus_musculus
ENSXETG00000013633	rab30	100	93.103	MGP_PahariEiJ_G0013212	Rab30	100	93.103	Mus_pahari
ENSXETG00000013633	rab30	100	93.103	MGP_SPRETEiJ_G0031102	Rab30	100	93.103	Mus_spretus
ENSXETG00000013633	rab30	100	93.103	ENSMPUG00000008088	RAB30	100	93.103	Mustela_putorius_furo
ENSXETG00000013633	rab30	100	92.118	ENSMLUG00000006552	RAB30	100	92.118	Myotis_lucifugus
ENSXETG00000013633	rab30	100	93.103	ENSNGAG00000018930	Rab30	100	93.103	Nannospalax_galili
ENSXETG00000013633	rab30	100	85.222	ENSNBRG00000002082	rab30	93	85.222	Neolamprologus_brichardi
ENSXETG00000013633	rab30	100	93.103	ENSNLEG00000029364	RAB30	100	93.103	Nomascus_leucogenys
ENSXETG00000013633	rab30	100	91.626	ENSMEUG00000012886	RAB30	100	91.626	Notamacropus_eugenii
ENSXETG00000013633	rab30	59	95.833	ENSOPRG00000007511	RAB30	100	95.833	Ochotona_princeps
ENSXETG00000013633	rab30	100	93.103	ENSODEG00000003833	RAB30	100	93.103	Octodon_degus
ENSXETG00000013633	rab30	100	85.222	ENSONIG00000005708	rab30	100	85.222	Oreochromis_niloticus
ENSXETG00000013633	rab30	100	93.103	ENSOCUG00000007580	RAB30	100	93.103	Oryctolagus_cuniculus
ENSXETG00000013633	rab30	100	84.729	ENSORLG00000029812	rab30	100	84.729	Oryzias_latipes
ENSXETG00000013633	rab30	100	84.729	ENSORLG00020015288	rab30	100	84.729	Oryzias_latipes_hni
ENSXETG00000013633	rab30	100	84.729	ENSORLG00015020972	rab30	100	84.729	Oryzias_latipes_hsok
ENSXETG00000013633	rab30	100	85.222	ENSOMEG00000001613	rab30	100	85.222	Oryzias_melastigma
ENSXETG00000013633	rab30	100	93.103	ENSOGAG00000033189	RAB30	100	93.103	Otolemur_garnettii
ENSXETG00000013633	rab30	100	93.103	ENSOARG00000005688	RAB30	100	93.103	Ovis_aries
ENSXETG00000013633	rab30	100	93.103	ENSPPAG00000031604	RAB30	100	93.103	Pan_paniscus
ENSXETG00000013633	rab30	100	93.103	ENSPPRG00000023881	RAB30	100	93.103	Panthera_pardus
ENSXETG00000013633	rab30	100	93.103	ENSPTIG00000009836	RAB30	100	93.103	Panthera_tigris_altaica
ENSXETG00000013633	rab30	100	93.103	ENSPTRG00000004125	RAB30	100	93.103	Pan_troglodytes
ENSXETG00000013633	rab30	100	93.103	ENSPANG00000003974	RAB30	100	93.103	Papio_anubis
ENSXETG00000013633	rab30	99	87.624	ENSPKIG00000015202	rab30	99	87.624	Paramormyrops_kingsleyae
ENSXETG00000013633	rab30	100	91.133	ENSPSIG00000003078	RAB30	100	91.133	Pelodiscus_sinensis
ENSXETG00000013633	rab30	100	75.000	ENSPMGG00000016093	rab30	100	75.000	Periophthalmus_magnuspinnatus
ENSXETG00000013633	rab30	100	93.103	ENSPEMG00000023854	Rab30	100	93.103	Peromyscus_maniculatus_bairdii
ENSXETG00000013633	rab30	99	67.143	ENSPMAG00000006105	rab30	99	67.143	Petromyzon_marinus
ENSXETG00000013633	rab30	100	93.103	ENSPCIG00000027547	RAB30	94	93.103	Phascolarctos_cinereus
ENSXETG00000013633	rab30	100	84.236	ENSPFOG00000005479	rab30	100	84.236	Poecilia_formosa
ENSXETG00000013633	rab30	100	84.236	ENSPLAG00000015383	rab30	100	84.236	Poecilia_latipinna
ENSXETG00000013633	rab30	100	84.236	ENSPMEG00000009701	rab30	100	84.236	Poecilia_mexicana
ENSXETG00000013633	rab30	100	84.236	ENSPREG00000014634	rab30	100	84.236	Poecilia_reticulata
ENSXETG00000013633	rab30	100	93.103	ENSPPYG00000003733	RAB30	100	93.103	Pongo_abelii
ENSXETG00000013633	rab30	100	92.611	ENSPCAG00000000574	RAB30	100	92.611	Procavia_capensis
ENSXETG00000013633	rab30	100	93.103	ENSPCOG00000017316	RAB30	100	93.103	Propithecus_coquereli
ENSXETG00000013633	rab30	100	93.103	ENSPVAG00000005455	RAB30	100	93.103	Pteropus_vampyrus
ENSXETG00000013633	rab30	100	85.222	ENSPNYG00000009728	rab30	93	85.222	Pundamilia_nyererei
ENSXETG00000013633	rab30	99	85.075	ENSPNAG00000010760	rab30	100	85.075	Pygocentrus_nattereri
ENSXETG00000013633	rab30	100	93.103	ENSRNOG00000010224	Rab30	100	93.103	Rattus_norvegicus
ENSXETG00000013633	rab30	100	93.103	ENSRBIG00000039227	RAB30	100	93.103	Rhinopithecus_bieti
ENSXETG00000013633	rab30	100	93.103	ENSRROG00000031260	RAB30	100	93.103	Rhinopithecus_roxellana
ENSXETG00000013633	rab30	100	93.103	ENSSBOG00000026403	RAB30	100	93.103	Saimiri_boliviensis_boliviensis
ENSXETG00000013633	rab30	100	91.748	ENSSHAG00000018081	RAB30	100	91.748	Sarcophilus_harrisii
ENSXETG00000013633	rab30	100	84.236	ENSSMAG00000002500	rab30	100	84.236	Scophthalmus_maximus
ENSXETG00000013633	rab30	100	85.222	ENSSDUG00000013325	rab30	100	85.222	Seriola_dumerili
ENSXETG00000013633	rab30	100	85.222	ENSSLDG00000022533	rab30	100	85.222	Seriola_lalandi_dorsalis
ENSXETG00000013633	rab30	100	91.626	ENSSPUG00000006349	RAB30	100	91.626	Sphenodon_punctatus
ENSXETG00000013633	rab30	100	85.222	ENSSPAG00000013422	rab30	100	85.222	Stegastes_partitus
ENSXETG00000013633	rab30	100	93.103	ENSSSCG00000014900	RAB30	100	93.103	Sus_scrofa
ENSXETG00000013633	rab30	100	91.626	ENSTGUG00000012941	RAB30	100	91.626	Taeniopygia_guttata
ENSXETG00000013633	rab30	99	85.572	ENSTRUG00000022559	rab30	99	85.572	Takifugu_rubripes
ENSXETG00000013633	rab30	100	93.103	ENSTBEG00000009832	RAB30	100	93.103	Tupaia_belangeri
ENSXETG00000013633	rab30	100	93.103	ENSTTRG00000006100	RAB30	100	93.103	Tursiops_truncatus
ENSXETG00000013633	rab30	100	93.103	ENSUAMG00000009326	RAB30	100	93.103	Ursus_americanus
ENSXETG00000013633	rab30	100	93.103	ENSUMAG00000023572	RAB30	100	93.103	Ursus_maritimus
ENSXETG00000013633	rab30	100	93.103	ENSVVUG00000017471	RAB30	100	93.103	Vulpes_vulpes
ENSXETG00000013633	rab30	100	84.236	ENSXMAG00000025848	rab30	100	84.236	Xiphophorus_maculatus