EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000013850 (Gene tree)
Gene ID: -
Gene Symbol: grsf1
Alias: -
Full Name: Xenopus tropicalis G-rich RNA sequence binding factor 1 (grsf1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 20460 bases
Position: chrGL172713.1:1604741-1625200
Accession: NM_001172302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000031456	RRM_1	PF00076.22	3.2e-25	1	2
ENSXETP00000031456	RRM_1	PF00076.22	3.2e-25	2	2
ENSXETP00000030307	RRM_1	PF00076.22	4e-25	1	2
ENSXETP00000030307	RRM_1	PF00076.22	4e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000031456	-	1839	XM_012970206	ENSXETP00000031456	348 (aa)	XP_012825660	B3DM49
ENSXETT00000030307	-	1738	-	ENSXETP00000030307	366 (aa)	-	F6YIH2

Gene Model

Click here to download ENSXETG00000013850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000013850	grsf1	99	41.622	ENSXETG00000023567	hnrnph3	86	42.179
ENSXETG00000013850	grsf1	99	42.541	ENSXETG00000018321	hnrnph1	79	42.090
ENSXETG00000013850	grsf1	98	31.746	ENSXETG00000014694	rbm12b	94	30.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013850	grsf1	100	51.491	ENSG00000132463	GRSF1	99	52.632	Homo_sapiens
ENSXETG00000013850	grsf1	100	50.708	ENSAMEG00000005896	GRSF1	99	51.499	Ailuropoda_melanoleuca
ENSXETG00000013850	grsf1	100	51.989	ENSACAG00000012921	GRSF1	73	51.934	Anolis_carolinensis
ENSXETG00000013850	grsf1	100	50.284	ENSANAG00000022114	GRSF1	97	51.603	Aotus_nancymaae
ENSXETG00000013850	grsf1	100	50.852	ENSBTAG00000008577	GRSF1	100	52.033	Bos_taurus
ENSXETG00000013850	grsf1	100	50.284	ENSCJAG00000014477	GRSF1	98	51.603	Callithrix_jacchus
ENSXETG00000013850	grsf1	100	49.007	ENSCAFG00000002922	GRSF1	100	51.220	Canis_familiaris
ENSXETG00000013850	grsf1	100	50.852	ENSCAFG00020027060	GRSF1	86	51.499	Canis_lupus_dingo
ENSXETG00000013850	grsf1	100	50.568	ENSCHIG00000021580	GRSF1	75	52.044	Capra_hircus
ENSXETG00000013850	grsf1	99	44.510	ENSTSYG00000028860	-	98	43.478	Carlito_syrichta
ENSXETG00000013850	grsf1	100	50.568	ENSTSYG00000008487	-	99	52.322	Carlito_syrichta
ENSXETG00000013850	grsf1	99	50.000	ENSCAPG00000000156	GRSF1	99	51.282	Cavia_aperea
ENSXETG00000013850	grsf1	100	50.565	ENSCPOG00000011662	GRSF1	99	50.000	Cavia_porcellus
ENSXETG00000013850	grsf1	100	50.284	ENSCCAG00000028735	-	75	50.954	Cebus_capucinus
ENSXETG00000013850	grsf1	99	43.038	ENSCCAG00000024189	-	87	38.214	Cebus_capucinus
ENSXETG00000013850	grsf1	100	50.568	ENSCATG00000035808	GRSF1	98	51.923	Cercocebus_atys
ENSXETG00000013850	grsf1	100	50.282	ENSCLAG00000003057	GRSF1	99	50.409	Chinchilla_lanigera
ENSXETG00000013850	grsf1	100	50.852	ENSCSAG00000004856	GRSF1	75	51.226	Chlorocebus_sabaeus
ENSXETG00000013850	grsf1	100	50.282	ENSCPBG00000019502	GRSF1	68	49.863	Chrysemys_picta_bellii
ENSXETG00000013850	grsf1	100	50.296	ENSCANG00000037992	GRSF1	99	52.322	Colobus_angolensis_palliatus
ENSXETG00000013850	grsf1	100	52.304	ENSCGRG00001019953	Grsf1	100	52.304	Cricetulus_griseus_chok1gshd
ENSXETG00000013850	grsf1	99	52.589	ENSCGRG00000005357	Grsf1	99	52.589	Cricetulus_griseus_crigri
ENSXETG00000013850	grsf1	100	50.852	ENSDORG00000015145	Grsf1	96	61.194	Dipodomys_ordii
ENSXETG00000013850	grsf1	100	51.275	ENSETEG00000013786	GRSF1	100	51.282	Echinops_telfairi
ENSXETG00000013850	grsf1	99	52.316	ENSEASG00005016685	GRSF1	70	52.044	Equus_asinus_asinus
ENSXETG00000013850	grsf1	99	52.044	ENSECAG00000024208	GRSF1	70	51.771	Equus_caballus
ENSXETG00000013850	grsf1	99	38.953	ENSELUG00000011613	-	87	39.155	Esox_lucius
ENSXETG00000013850	grsf1	100	50.852	ENSFCAG00000007270	GRSF1	75	51.499	Felis_catus
ENSXETG00000013850	grsf1	100	42.297	ENSFALG00000008394	GRSF1	99	43.149	Ficedula_albicollis
ENSXETG00000013850	grsf1	57	54.000	ENSFDAG00000008167	-	96	58.955	Fukomys_damarensis
ENSXETG00000013850	grsf1	99	39.377	ENSGALG00000031160	GRSF1	72	40.055	Gallus_gallus
ENSXETG00000013850	grsf1	100	52.113	ENSGAGG00000006013	GRSF1	78	52.044	Gopherus_agassizii
ENSXETG00000013850	grsf1	100	50.592	ENSGGOG00000014852	-	99	52.632	Gorilla_gorilla
ENSXETG00000013850	grsf1	100	51.136	ENSHGLG00000000661	GRSF1	99	51.226	Heterocephalus_glaber_female
ENSXETG00000013850	grsf1	100	51.136	ENSHGLG00100005974	GRSF1	96	61.194	Heterocephalus_glaber_male
ENSXETG00000013850	grsf1	100	51.762	ENSSTOG00000011569	GRSF1	100	51.762	Ictidomys_tridecemlineatus
ENSXETG00000013850	grsf1	95	52.707	ENSJJAG00000005325	Grsf1	96	61.940	Jaculus_jaculus
ENSXETG00000013850	grsf1	99	49.128	ENSLACG00000009507	GRSF1	96	49.858	Latimeria_chalumnae
ENSXETG00000013850	grsf1	99	46.064	ENSLOCG00000011589	GRSF1	77	47.175	Lepisosteus_oculatus
ENSXETG00000013850	grsf1	100	50.847	ENSLAFG00000017032	-	99	49.162	Loxodonta_africana
ENSXETG00000013850	grsf1	100	50.852	ENSMFAG00000037346	GRSF1	98	52.244	Macaca_fascicularis
ENSXETG00000013850	grsf1	100	50.852	ENSMMUG00000000380	GRSF1	98	52.244	Macaca_mulatta
ENSXETG00000013850	grsf1	100	45.609	ENSMNEG00000023162	GRSF1	99	44.720	Macaca_nemestrina
ENSXETG00000013850	grsf1	100	50.949	ENSMLEG00000007180	GRSF1	100	50.949	Mandrillus_leucophaeus
ENSXETG00000013850	grsf1	99	39.660	ENSMGAG00000009940	GRSF1	97	40.000	Meleagris_gallopavo
ENSXETG00000013850	grsf1	100	50.568	ENSMICG00000005385	GRSF1	98	51.226	Microcebus_murinus
ENSXETG00000013850	grsf1	57	56.000	ENSMOCG00000012769	-	96	61.194	Microtus_ochrogaster
ENSXETG00000013850	grsf1	100	50.708	ENSMODG00000019088	GRSF1	66	51.524	Monodelphis_domestica
ENSXETG00000013850	grsf1	100	51.762	MGP_CAROLIEiJ_G0027377	Grsf1	96	61.940	Mus_caroli
ENSXETG00000013850	grsf1	100	51.762	ENSMUSG00000044221	Grsf1	96	61.940	Mus_musculus
ENSXETG00000013850	grsf1	100	51.705	MGP_PahariEiJ_G0017155	Grsf1	96	61.940	Mus_pahari
ENSXETG00000013850	grsf1	100	51.762	MGP_SPRETEiJ_G0028374	Grsf1	100	51.762	Mus_spretus
ENSXETG00000013850	grsf1	100	50.992	ENSMPUG00000009499	GRSF1	96	51.499	Mustela_putorius_furo
ENSXETG00000013850	grsf1	100	50.980	ENSMLUG00000028158	GRSF1	99	52.162	Myotis_lucifugus
ENSXETG00000013850	grsf1	57	55.333	ENSNGAG00000022132	-	96	60.448	Nannospalax_galili
ENSXETG00000013850	grsf1	100	50.153	ENSNLEG00000007721	-	98	52.244	Nomascus_leucogenys
ENSXETG00000013850	grsf1	100	40.909	ENSMEUG00000015942	GRSF1	97	42.297	Notamacropus_eugenii
ENSXETG00000013850	grsf1	83	50.164	ENSOPRG00000010148	-	77	50.164	Ochotona_princeps
ENSXETG00000013850	grsf1	100	50.142	ENSODEG00000001826	-	77	50.681	Octodon_degus
ENSXETG00000013850	grsf1	100	43.059	ENSODEG00000004897	-	99	43.597	Octodon_degus
ENSXETG00000013850	grsf1	100	44.193	ENSODEG00000010775	-	100	45.115	Octodon_degus
ENSXETG00000013850	grsf1	92	40.400	ENSOANG00000013696	-	95	40.506	Ornithorhynchus_anatinus
ENSXETG00000013850	grsf1	100	50.568	ENSOCUG00000010029	GRSF1	77	51.226	Oryctolagus_cuniculus
ENSXETG00000013850	grsf1	99	50.269	ENSOGAG00000000141	-	99	50.269	Otolemur_garnettii
ENSXETG00000013850	grsf1	100	43.966	ENSOGAG00000026370	-	79	44.262	Otolemur_garnettii
ENSXETG00000013850	grsf1	100	50.281	ENSOARG00000011898	GRSF1	99	51.892	Ovis_aries
ENSXETG00000013850	grsf1	99	50.592	ENSPPAG00000042456	-	99	52.632	Pan_paniscus
ENSXETG00000013850	grsf1	100	50.852	ENSPPRG00000022913	GRSF1	75	51.499	Panthera_pardus
ENSXETG00000013850	grsf1	100	51.491	ENSPTIG00000008060	GRSF1	100	51.491	Panthera_tigris_altaica
ENSXETG00000013850	grsf1	100	51.136	ENSPTRG00000016136	GRSF1	98	52.244	Pan_troglodytes
ENSXETG00000013850	grsf1	100	51.136	ENSPANG00000018597	GRSF1	98	52.564	Papio_anubis
ENSXETG00000013850	grsf1	98	53.968	ENSPSIG00000014267	-	93	55.779	Pelodiscus_sinensis
ENSXETG00000013850	grsf1	100	51.491	ENSPEMG00000012814	Grsf1	100	51.491	Peromyscus_maniculatus_bairdii
ENSXETG00000013850	grsf1	100	50.852	ENSPCIG00000000627	GRSF1	74	50.980	Phascolarctos_cinereus
ENSXETG00000013850	grsf1	99	55.435	ENSPPYG00000014812	GRSF1	71	55.676	Pongo_abelii
ENSXETG00000013850	grsf1	99	50.681	ENSPCAG00000013949	GRSF1	82	50.681	Procavia_capensis
ENSXETG00000013850	grsf1	100	50.992	ENSPVAG00000004338	GRSF1	81	51.771	Pteropus_vampyrus
ENSXETG00000013850	grsf1	99	52.044	ENSRNOG00000003392	Grsf1	94	52.044	Rattus_norvegicus
ENSXETG00000013850	grsf1	100	50.568	ENSRBIG00000036494	GRSF1	98	51.923	Rhinopithecus_bieti
ENSXETG00000013850	grsf1	100	50.568	ENSRROG00000035735	GRSF1	98	51.923	Rhinopithecus_roxellana
ENSXETG00000013850	grsf1	100	49.282	ENSSBOG00000032141	GRSF1	99	51.795	Saimiri_boliviensis_boliviensis
ENSXETG00000013850	grsf1	100	49.153	ENSSHAG00000018365	GRSF1	93	50.137	Sarcophilus_harrisii
ENSXETG00000013850	grsf1	100	48.466	ENSSARG00000011681	GRSF1	99	50.641	Sorex_araneus
ENSXETG00000013850	grsf1	94	48.338	ENSSPUG00000007576	GRSF1	75	47.851	Sphenodon_punctatus
ENSXETG00000013850	grsf1	100	50.992	ENSSSCG00000008940	GRSF1	75	52.044	Sus_scrofa
ENSXETG00000013850	grsf1	99	43.305	ENSTGUG00000001644	GRSF1	99	42.735	Taeniopygia_guttata
ENSXETG00000013850	grsf1	100	49.847	ENSTBEG00000010173	GRSF1	99	51.923	Tupaia_belangeri
ENSXETG00000013850	grsf1	100	49.858	ENSTTRG00000008405	GRSF1	92	51.499	Tursiops_truncatus
ENSXETG00000013850	grsf1	98	53.333	ENSUAMG00000008901	GRSF1	85	53.750	Ursus_americanus
ENSXETG00000013850	grsf1	100	50.852	ENSUMAG00000003757	GRSF1	87	51.499	Ursus_maritimus
ENSXETG00000013850	grsf1	98	48.288	ENSVPAG00000011889	GRSF1	83	50.164	Vicugna_pacos
ENSXETG00000013850	grsf1	100	50.708	ENSVVUG00000004150	GRSF1	99	51.884	Vulpes_vulpes