EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000013949 (Gene tree)
Gene ID: -
Gene Symbol: papola
Alias: -
Full Name: Xenopus tropicalis poly(A) polymerase alpha (papola)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 33416 bases
Position: chrGL172821.1:1046175-1079590
Accession: NM_001142910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000030475	PAP_RNA-bind	PF04926.15	1.5e-23	1	1
ENSXETP00000030476	PAP_RNA-bind	PF04926.15	6.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000030476	-	2222	-	ENSXETP00000030476	733 (aa)	-	F7C9P0
ENSXETT00000030475	-	2286	-	ENSXETP00000030475	732 (aa)	-	B5DEV0

Gene Model

Click here to download ENSXETG00000013949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000013949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000013949	papola	99	58.177	ENSXETG00000002208	papolg	98	58.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000013949	papola	100	82.819	ENSG00000090060	PAPOLA	98	93.907	Homo_sapiens
ENSXETG00000013949	papola	99	82.927	ENSAMEG00000014142	PAPOLA	99	82.927	Ailuropoda_melanoleuca
ENSXETG00000013949	papola	99	82.016	ENSAPLG00000006645	PAPOLA	99	82.016	Anas_platyrhynchos
ENSXETG00000013949	papola	99	82.297	ENSACAG00000013474	PAPOLA	99	87.102	Anolis_carolinensis
ENSXETG00000013949	papola	73	85.768	ENSANAG00000027941	-	98	85.768	Aotus_nancymaae
ENSXETG00000013949	papola	100	82.615	ENSANAG00000018274	PAPOLA	99	92.687	Aotus_nancymaae
ENSXETG00000013949	papola	100	69.565	ENSAMXG00000018141	papola	99	82.940	Astyanax_mexicanus
ENSXETG00000013949	papola	100	83.627	ENSBTAG00000004054	PAPOLA	100	83.627	Bos_taurus
ENSXETG00000013949	papola	100	82.615	ENSCJAG00000006512	PAPOLA	99	92.687	Callithrix_jacchus
ENSXETG00000013949	papola	100	82.953	ENSCAFG00000017783	PAPOLA	100	82.953	Canis_familiaris
ENSXETG00000013949	papola	91	93.346	ENSCAFG00020011550	PAPOLA	100	93.346	Canis_lupus_dingo
ENSXETG00000013949	papola	100	83.221	ENSCHIG00000025004	-	99	88.038	Capra_hircus
ENSXETG00000013949	papola	99	83.424	ENSTSYG00000012384	PAPOLA	99	83.424	Carlito_syrichta
ENSXETG00000013949	papola	100	79.082	ENSCPOG00000002648	PAPOLA	100	79.082	Cavia_porcellus
ENSXETG00000013949	papola	100	82.749	ENSCCAG00000025120	PAPOLA	98	93.135	Cebus_capucinus
ENSXETG00000013949	papola	100	82.819	ENSCATG00000018815	PAPOLA	99	93.482	Cercocebus_atys
ENSXETG00000013949	papola	100	83.152	ENSCLAG00000016342	PAPOLA	100	83.424	Chinchilla_lanigera
ENSXETG00000013949	papola	100	82.819	ENSCSAG00000010516	PAPOLA	100	82.819	Chlorocebus_sabaeus
ENSXETG00000013949	papola	72	73.333	ENSCHOG00000001115	PAPOLA	72	73.333	Choloepus_hoffmanni
ENSXETG00000013949	papola	100	82.749	ENSCPBG00000024125	PAPOLA	100	82.749	Chrysemys_picta_bellii
ENSXETG00000013949	papola	99	77.524	ENSCANG00000000159	PAPOLA	100	77.568	Colobus_angolensis_palliatus
ENSXETG00000013949	papola	99	73.848	ENSCGRG00001002732	-	98	75.981	Cricetulus_griseus_chok1gshd
ENSXETG00000013949	papola	100	83.762	ENSCGRG00001022693	-	100	83.762	Cricetulus_griseus_chok1gshd
ENSXETG00000013949	papola	100	77.267	ENSCGRG00001000229	-	99	82.154	Cricetulus_griseus_chok1gshd
ENSXETG00000013949	papola	100	83.401	ENSCGRG00000003664	-	100	83.696	Cricetulus_griseus_crigri
ENSXETG00000013949	papola	98	71.074	ENSCGRG00000001888	-	96	71.074	Cricetulus_griseus_crigri
ENSXETG00000013949	papola	100	73.098	ENSCGRG00000000257	-	100	73.098	Cricetulus_griseus_crigri
ENSXETG00000013949	papola	67	52.295	ENSCSEG00000001841	-	74	52.295	Cynoglossus_semilaevis
ENSXETG00000013949	papola	100	68.302	ENSDARG00000009585	papola	100	68.302	Danio_rerio
ENSXETG00000013949	papola	66	76.701	ENSDORG00000013415	-	100	77.572	Dipodomys_ordii
ENSXETG00000013949	papola	99	73.684	ENSETEG00000004889	PAPOLA	100	73.684	Echinops_telfairi
ENSXETG00000013949	papola	73	83.925	ENSELUG00000018972	papola	100	65.762	Esox_lucius
ENSXETG00000013949	papola	100	83.491	ENSFCAG00000006784	PAPOLA	100	83.491	Felis_catus
ENSXETG00000013949	papola	99	79.315	ENSFALG00000002547	PAPOLA	98	79.315	Ficedula_albicollis
ENSXETG00000013949	papola	99	82.361	ENSFDAG00000010370	PAPOLA	100	82.361	Fukomys_damarensis
ENSXETG00000013949	papola	73	64.234	ENSGMOG00000010209	papola	100	64.545	Gadus_morhua
ENSXETG00000013949	papola	100	82.090	ENSGALG00000033099	PAPOLA	100	82.090	Gallus_gallus
ENSXETG00000013949	papola	66	54.375	ENSGACG00000006142	-	100	53.958	Gasterosteus_aculeatus
ENSXETG00000013949	papola	90	86.858	ENSGAGG00000020500	PAPOLA	99	86.858	Gopherus_agassizii
ENSXETG00000013949	papola	100	82.819	ENSGGOG00000006287	PAPOLA	98	86.803	Gorilla_gorilla
ENSXETG00000013949	papola	99	72.245	ENSHGLG00000017457	-	99	72.245	Heterocephalus_glaber_female
ENSXETG00000013949	papola	100	82.880	ENSHGLG00000007909	-	100	82.880	Heterocephalus_glaber_female
ENSXETG00000013949	papola	100	65.265	ENSHGLG00000007467	-	100	68.385	Heterocephalus_glaber_female
ENSXETG00000013949	papola	100	82.745	ENSHGLG00100017273	PAPOLA	100	82.745	Heterocephalus_glaber_male
ENSXETG00000013949	papola	100	65.700	ENSIPUG00000005919	papola	100	65.700	Ictalurus_punctatus
ENSXETG00000013949	papola	100	83.696	ENSSTOG00000011471	PAPOLA	100	83.696	Ictidomys_tridecemlineatus
ENSXETG00000013949	papola	99	82.679	ENSJJAG00000024340	Papola	100	82.679	Jaculus_jaculus
ENSXETG00000013949	papola	99	75.304	ENSLACG00000018136	PAPOLA	99	75.304	Latimeria_chalumnae
ENSXETG00000013949	papola	99	64.690	ENSLOCG00000008632	papola	99	65.235	Lepisosteus_oculatus
ENSXETG00000013949	papola	99	83.696	ENSLAFG00000000946	PAPOLA	99	83.696	Loxodonta_africana
ENSXETG00000013949	papola	100	82.819	ENSMFAG00000001792	PAPOLA	99	93.346	Macaca_fascicularis
ENSXETG00000013949	papola	100	82.819	ENSMMUG00000018610	PAPOLA	100	82.819	Macaca_mulatta
ENSXETG00000013949	papola	100	82.819	ENSMNEG00000043747	PAPOLA	99	92.647	Macaca_nemestrina
ENSXETG00000013949	papola	100	82.819	ENSMLEG00000032066	PAPOLA	100	82.884	Mandrillus_leucophaeus
ENSXETG00000013949	papola	84	80.323	ENSMGAG00000013228	-	100	80.323	Meleagris_gallopavo
ENSXETG00000013949	papola	100	83.627	ENSMAUG00000017178	Papola	100	83.627	Mesocricetus_auratus
ENSXETG00000013949	papola	100	83.491	ENSMICG00000010347	PAPOLA	98	93.161	Microcebus_murinus
ENSXETG00000013949	papola	100	84.032	ENSMOCG00000021670	Papola	100	84.032	Microtus_ochrogaster
ENSXETG00000013949	papola	99	71.833	ENSMODG00000001969	-	99	71.968	Monodelphis_domestica
ENSXETG00000013949	papola	100	83.491	ENSMODG00000012887	-	100	83.491	Monodelphis_domestica
ENSXETG00000013949	papola	100	83.356	MGP_CAROLIEiJ_G0018093	Papola	100	83.356	Mus_caroli
ENSXETG00000013949	papola	100	83.627	ENSMUSG00000021111	Papola	100	83.627	Mus_musculus
ENSXETG00000013949	papola	100	83.627	MGP_PahariEiJ_G0029850	Papola	100	83.627	Mus_pahari
ENSXETG00000013949	papola	100	83.491	MGP_SPRETEiJ_G0018943	Papola	100	83.491	Mus_spretus
ENSXETG00000013949	papola	100	83.627	ENSMPUG00000003054	PAPOLA	100	83.627	Mustela_putorius_furo
ENSXETG00000013949	papola	100	83.221	ENSMLUG00000010922	PAPOLA	100	83.221	Myotis_lucifugus
ENSXETG00000013949	papola	100	83.627	ENSNGAG00000022172	Papola	100	83.627	Nannospalax_galili
ENSXETG00000013949	papola	99	78.649	ENSNLEG00000000625	PAPOLA	100	78.238	Nomascus_leucogenys
ENSXETG00000013949	papola	67	60.278	ENSMEUG00000007831	-	74	60.278	Notamacropus_eugenii
ENSXETG00000013949	papola	98	79.750	ENSOPRG00000007625	PAPOLA	100	79.889	Ochotona_princeps
ENSXETG00000013949	papola	65	53.782	ENSONIG00000001062	-	96	53.782	Oreochromis_niloticus
ENSXETG00000013949	papola	99	82.698	ENSOANG00000013812	PAPOLA	99	82.698	Ornithorhynchus_anatinus
ENSXETG00000013949	papola	99	81.140	ENSOCUG00000011531	PAPOLA	99	81.140	Oryctolagus_cuniculus
ENSXETG00000013949	papola	100	83.378	ENSOGAG00000004611	PAPOLA	100	83.378	Otolemur_garnettii
ENSXETG00000013949	papola	100	83.491	ENSOARG00000016579	-	100	83.491	Ovis_aries
ENSXETG00000013949	papola	100	82.819	ENSPPAG00000030505	PAPOLA	98	90.335	Pan_paniscus
ENSXETG00000013949	papola	100	83.491	ENSPPRG00000008616	PAPOLA	100	83.491	Panthera_pardus
ENSXETG00000013949	papola	99	83.424	ENSPTIG00000018852	PAPOLA	99	83.424	Panthera_tigris_altaica
ENSXETG00000013949	papola	100	82.819	ENSPTRG00000006704	PAPOLA	100	82.884	Pan_troglodytes
ENSXETG00000013949	papola	100	82.819	ENSPANG00000025582	PAPOLA	98	93.482	Papio_anubis
ENSXETG00000013949	papola	100	68.373	ENSPKIG00000014471	papola	100	69.685	Paramormyrops_kingsleyae
ENSXETG00000013949	papola	100	83.378	ENSPSIG00000014157	PAPOLA	87	83.378	Pelodiscus_sinensis
ENSXETG00000013949	papola	100	84.032	ENSPEMG00000000043	Papola	100	84.032	Peromyscus_maniculatus_bairdii
ENSXETG00000013949	papola	100	83.243	ENSPCIG00000013234	PAPOLA	99	85.547	Phascolarctos_cinereus
ENSXETG00000013949	papola	100	80.537	ENSPPYG00000006128	PAPOLA	100	80.537	Pongo_abelii
ENSXETG00000013949	papola	89	81.250	ENSPCAG00000004199	PAPOLA	100	81.250	Procavia_capensis
ENSXETG00000013949	papola	99	80.190	ENSPCOG00000022117	PAPOLA	97	88.476	Propithecus_coquereli
ENSXETG00000013949	papola	100	82.815	ENSPVAG00000013925	PAPOLA	100	82.815	Pteropus_vampyrus
ENSXETG00000013949	papola	100	69.648	ENSPNAG00000010467	papola	100	70.596	Pygocentrus_nattereri
ENSXETG00000013949	papola	100	83.221	ENSRNOG00000004827	Papola	100	83.356	Rattus_norvegicus
ENSXETG00000013949	papola	99	82.425	ENSRBIG00000038490	PAPOLA	97	92.669	Rhinopithecus_bieti
ENSXETG00000013949	papola	100	82.819	ENSRROG00000025545	PAPOLA	100	82.884	Rhinopithecus_roxellana
ENSXETG00000013949	papola	99	82.768	ENSSBOG00000024061	PAPOLA	97	93.409	Saimiri_boliviensis_boliviensis
ENSXETG00000013949	papola	99	83.288	ENSSHAG00000015211	PAPOLA	99	83.288	Sarcophilus_harrisii
ENSXETG00000013949	papola	100	68.449	ENSSFOG00015004431	papola	98	85.028	Scleropages_formosus
ENSXETG00000013949	papola	66	57.231	ENSSDUG00000018247	-	72	57.231	Seriola_dumerili
ENSXETG00000013949	papola	100	83.108	ENSSPUG00000005835	PAPOLA	100	83.108	Sphenodon_punctatus
ENSXETG00000013949	papola	100	83.085	ENSSSCG00000002505	-	100	83.152	Sus_scrofa
ENSXETG00000013949	papola	99	81.769	ENSTGUG00000012687	PAPOLA	100	81.275	Taeniopygia_guttata
ENSXETG00000013949	papola	75	85.326	ENSTBEG00000000194	PAPOLA	75	85.326	Tupaia_belangeri
ENSXETG00000013949	papola	80	84.690	ENSTTRG00000005717	PAPOLA	80	84.690	Tursiops_truncatus
ENSXETG00000013949	papola	58	94.326	ENSUAMG00000025737	PAPOLA	99	94.326	Ursus_americanus
ENSXETG00000013949	papola	99	83.401	ENSVPAG00000006464	PAPOLA	100	83.401	Vicugna_pacos
ENSXETG00000013949	papola	100	83.696	ENSVVUG00000028340	PAPOLA	100	83.696	Vulpes_vulpes