EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000014420 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: -
Full Name: Xenopus tropicalis yrdC N6-threonylcarbamoyltransferase domain containing (yrdc)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 9336 bases
Position: chrGL173128.1:146655-155990
Accession: NM_001015837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000031540	Sua5_yciO_yrdC	PF01300.18	8.6e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000031540	-	1498	-	ENSXETP00000031540	238 (aa)	-	Q5FVA3

Gene Model

Click here to download ENSXETG00000014420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000014420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000014420	yrdc	97	62.931	ENSG00000196449	YRDC	82	62.661	Homo_sapiens
ENSXETG00000014420	yrdc	99	60.504	ENSAPOG00000024293	yrdc	89	60.504	Acanthochromis_polyacanthus
ENSXETG00000014420	yrdc	78	68.280	ENSAMEG00000001173	YRDC	99	68.280	Ailuropoda_melanoleuca
ENSXETG00000014420	yrdc	87	66.827	ENSACIG00000017330	yrdc	77	66.827	Amphilophus_citrinellus
ENSXETG00000014420	yrdc	87	65.865	ENSAOCG00000021647	yrdc	78	65.865	Amphiprion_ocellaris
ENSXETG00000014420	yrdc	87	65.865	ENSAPEG00000006164	yrdc	78	65.865	Amphiprion_percula
ENSXETG00000014420	yrdc	86	69.118	ENSATEG00000010086	yrdc	75	69.118	Anabas_testudineus
ENSXETG00000014420	yrdc	81	64.583	ENSACAG00000017203	YRDC	92	64.103	Anolis_carolinensis
ENSXETG00000014420	yrdc	87	64.904	ENSANAG00000028788	-	89	64.904	Aotus_nancymaae
ENSXETG00000014420	yrdc	97	58.974	ENSANAG00000031052	-	84	58.974	Aotus_nancymaae
ENSXETG00000014420	yrdc	98	62.712	ENSACLG00000027775	yrdc	85	62.712	Astatotilapia_calliptera
ENSXETG00000014420	yrdc	87	66.346	ENSAMXG00000037791	yrdc	78	66.346	Astyanax_mexicanus
ENSXETG00000014420	yrdc	97	64.224	ENSBTAG00000006510	YRDC	83	64.224	Bos_taurus
ENSXETG00000014420	yrdc	86	37.864	WBGene00012997	Y48C3A.18	97	38.843	Caenorhabditis_elegans
ENSXETG00000014420	yrdc	97	62.500	ENSCJAG00000002078	YRDC	63	62.500	Callithrix_jacchus
ENSXETG00000014420	yrdc	99	63.291	ENSCAFG00000003253	YRDC	85	63.291	Canis_familiaris
ENSXETG00000014420	yrdc	97	64.655	ENSCAFG00020007843	YRDC	84	64.655	Canis_lupus_dingo
ENSXETG00000014420	yrdc	97	63.362	ENSCHIG00000007882	YRDC	83	63.362	Capra_hircus
ENSXETG00000014420	yrdc	73	69.364	ENSTSYG00000005555	YRDC	62	69.364	Carlito_syrichta
ENSXETG00000014420	yrdc	98	62.232	ENSCPOG00000036144	YRDC	82	62.232	Cavia_porcellus
ENSXETG00000014420	yrdc	98	62.232	ENSCCAG00000028891	YRDC	82	62.232	Cebus_capucinus
ENSXETG00000014420	yrdc	97	63.362	ENSCATG00000036928	YRDC	82	63.090	Cercocebus_atys
ENSXETG00000014420	yrdc	97	60.870	ENSCLAG00000015012	YRDC	81	60.870	Chinchilla_lanigera
ENSXETG00000014420	yrdc	97	63.362	ENSCSAG00000001116	YRDC	82	63.090	Chlorocebus_sabaeus
ENSXETG00000014420	yrdc	70	58.084	ENSCHOG00000005500	YRDC	78	58.084	Choloepus_hoffmanni
ENSXETG00000014420	yrdc	94	68.610	ENSCPBG00000018446	YRDC	95	68.610	Chrysemys_picta_bellii
ENSXETG00000014420	yrdc	86	49.533	ENSCING00000007564	-	98	49.533	Ciona_intestinalis
ENSXETG00000014420	yrdc	86	50.472	ENSCSAVG00000009982	-	98	50.472	Ciona_savignyi
ENSXETG00000014420	yrdc	97	62.931	ENSCANG00000031111	YRDC	82	62.661	Colobus_angolensis_palliatus
ENSXETG00000014420	yrdc	97	57.940	ENSCGRG00001000829	-	63	57.940	Cricetulus_griseus_chok1gshd
ENSXETG00000014420	yrdc	97	61.638	ENSCGRG00001014496	-	82	61.638	Cricetulus_griseus_chok1gshd
ENSXETG00000014420	yrdc	51	71.311	ENSCGRG00000001307	-	96	71.311	Cricetulus_griseus_crigri
ENSXETG00000014420	yrdc	89	67.773	ENSCSEG00000019075	yrdc	76	67.773	Cynoglossus_semilaevis
ENSXETG00000014420	yrdc	94	62.946	ENSCVAG00000017355	yrdc	83	62.946	Cyprinodon_variegatus
ENSXETG00000014420	yrdc	88	63.636	ENSDARG00000041428	yrdc	87	63.636	Danio_rerio
ENSXETG00000014420	yrdc	97	62.338	ENSDNOG00000038789	-	82	61.682	Dasypus_novemcinctus
ENSXETG00000014420	yrdc	83	49.749	ENSDNOG00000036198	-	96	49.749	Dasypus_novemcinctus
ENSXETG00000014420	yrdc	91	62.100	ENSDORG00000008788	Yrdc	97	62.100	Dipodomys_ordii
ENSXETG00000014420	yrdc	78	51.852	FBgn0061361	CG33786	75	51.852	Drosophila_melanogaster
ENSXETG00000014420	yrdc	98	49.356	ENSETEG00000003442	YRDC	82	49.356	Echinops_telfairi
ENSXETG00000014420	yrdc	93	48.305	ENSEBUG00000014080	yrdc	97	48.305	Eptatretus_burgeri
ENSXETG00000014420	yrdc	89	66.667	ENSEASG00005012253	YRDC	76	66.667	Equus_asinus_asinus
ENSXETG00000014420	yrdc	97	64.224	ENSECAG00000022522	YRDC	82	64.224	Equus_caballus
ENSXETG00000014420	yrdc	90	62.326	ENSELUG00000018071	yrdc	70	62.326	Esox_lucius
ENSXETG00000014420	yrdc	97	62.500	ENSFCAG00000011018	YRDC	82	62.232	Felis_catus
ENSXETG00000014420	yrdc	81	73.057	ENSFALG00000000964	YRDC	89	72.959	Ficedula_albicollis
ENSXETG00000014420	yrdc	86	64.706	ENSFHEG00000001029	yrdc	75	65.608	Fundulus_heteroclitus
ENSXETG00000014420	yrdc	86	66.176	ENSGMOG00000015635	yrdc	97	66.176	Gadus_morhua
ENSXETG00000014420	yrdc	81	30.244	ENSGALG00000025899	-	67	30.244	Gallus_gallus
ENSXETG00000014420	yrdc	97	68.534	ENSGALG00000029001	YRDC	88	68.534	Gallus_gallus
ENSXETG00000014420	yrdc	91	63.134	ENSGAFG00000008396	yrdc	80	63.134	Gambusia_affinis
ENSXETG00000014420	yrdc	98	61.277	ENSGACG00000013878	yrdc	96	61.277	Gasterosteus_aculeatus
ENSXETG00000014420	yrdc	92	68.950	ENSGAGG00000014968	YRDC	95	68.950	Gopherus_agassizii
ENSXETG00000014420	yrdc	97	62.931	ENSGGOG00000007619	YRDC	82	62.661	Gorilla_gorilla
ENSXETG00000014420	yrdc	98	63.559	ENSHBUG00000009298	yrdc	85	63.559	Haplochromis_burtoni
ENSXETG00000014420	yrdc	97	61.638	ENSHGLG00000014075	YRDC	82	61.638	Heterocephalus_glaber_female
ENSXETG00000014420	yrdc	86	64.878	ENSHGLG00100002734	YRDC	74	64.878	Heterocephalus_glaber_male
ENSXETG00000014420	yrdc	96	60.435	ENSHCOG00000006598	yrdc	88	60.435	Hippocampus_comes
ENSXETG00000014420	yrdc	99	61.864	ENSIPUG00000014985	yrdc	95	61.864	Ictalurus_punctatus
ENSXETG00000014420	yrdc	98	63.675	ENSSTOG00000001643	YRDC	82	63.675	Ictidomys_tridecemlineatus
ENSXETG00000014420	yrdc	87	67.308	ENSKMAG00000013468	yrdc	76	67.308	Kryptolebias_marmoratus
ENSXETG00000014420	yrdc	86	68.627	ENSLBEG00000027501	yrdc	75	68.627	Labrus_bergylta
ENSXETG00000014420	yrdc	97	66.529	ENSLACG00000010689	YRDC	95	72.464	Latimeria_chalumnae
ENSXETG00000014420	yrdc	79	31.980	ENSLACG00000017624	si:ch211-153b23.3	60	31.980	Latimeria_chalumnae
ENSXETG00000014420	yrdc	97	65.801	ENSLOCG00000003321	yrdc	95	65.801	Lepisosteus_oculatus
ENSXETG00000014420	yrdc	97	62.069	ENSLAFG00000017556	YRDC	82	62.069	Loxodonta_africana
ENSXETG00000014420	yrdc	87	66.667	ENSMFAG00000003487	YRDC	98	66.667	Macaca_fascicularis
ENSXETG00000014420	yrdc	97	63.362	ENSMMUG00000005372	YRDC	61	63.362	Macaca_mulatta
ENSXETG00000014420	yrdc	97	63.362	ENSMNEG00000029348	YRDC	82	63.090	Macaca_nemestrina
ENSXETG00000014420	yrdc	61	74.658	ENSMLEG00000041122	YRDC	97	74.658	Mandrillus_leucophaeus
ENSXETG00000014420	yrdc	96	62.009	ENSMAMG00000007315	yrdc	84	62.009	Mastacembelus_armatus
ENSXETG00000014420	yrdc	98	62.712	ENSMZEG00005006948	yrdc	85	62.712	Maylandia_zebra
ENSXETG00000014420	yrdc	86	74.020	ENSMGAG00000002833	YRDC	99	74.020	Meleagris_gallopavo
ENSXETG00000014420	yrdc	97	63.793	ENSMICG00000031688	YRDC	82	63.793	Microcebus_murinus
ENSXETG00000014420	yrdc	62	59.184	ENSMOCG00000000164	-	57	59.184	Microtus_ochrogaster
ENSXETG00000014420	yrdc	99	59.244	ENSMMOG00000002119	yrdc	87	59.244	Mola_mola
ENSXETG00000014420	yrdc	90	66.822	ENSMODG00000017750	YRDC	76	66.822	Monodelphis_domestica
ENSXETG00000014420	yrdc	98	61.603	ENSMALG00000012471	yrdc	86	61.603	Monopterus_albus
ENSXETG00000014420	yrdc	90	63.084	MGP_CAROLIEiJ_G0026453	Yrdc	98	74.757	Mus_caroli
ENSXETG00000014420	yrdc	98	63.090	ENSMUSG00000028889	Yrdc	100	75.238	Mus_musculus
ENSXETG00000014420	yrdc	97	62.931	MGP_PahariEiJ_G0028784	Yrdc	100	75.238	Mus_pahari
ENSXETG00000014420	yrdc	98	63.090	MGP_SPRETEiJ_G0027432	Yrdc	82	63.362	Mus_spretus
ENSXETG00000014420	yrdc	92	64.091	ENSMPUG00000014542	YRDC	88	64.091	Mustela_putorius_furo
ENSXETG00000014420	yrdc	95	52.444	ENSMLUG00000028796	-	79	52.444	Myotis_lucifugus
ENSXETG00000014420	yrdc	98	62.232	ENSMLUG00000000955	-	82	62.232	Myotis_lucifugus
ENSXETG00000014420	yrdc	82	63.590	ENSMLUG00000024310	-	96	63.590	Myotis_lucifugus
ENSXETG00000014420	yrdc	88	65.714	ENSNGAG00000019099	Yrdc	75	65.714	Nannospalax_galili
ENSXETG00000014420	yrdc	99	62.500	ENSNBRG00000009475	yrdc	87	62.500	Neolamprologus_brichardi
ENSXETG00000014420	yrdc	89	65.258	ENSNLEG00000011665	YRDC	77	65.258	Nomascus_leucogenys
ENSXETG00000014420	yrdc	88	67.619	ENSMEUG00000005068	YRDC	98	67.619	Notamacropus_eugenii
ENSXETG00000014420	yrdc	97	62.931	ENSODEG00000007401	YRDC	100	74.286	Octodon_degus
ENSXETG00000014420	yrdc	99	62.500	ENSONIG00000016213	yrdc	97	62.500	Oreochromis_niloticus
ENSXETG00000014420	yrdc	97	63.362	ENSOCUG00000005384	YRDC	78	63.362	Oryctolagus_cuniculus
ENSXETG00000014420	yrdc	86	63.235	ENSORLG00000014393	yrdc	75	63.235	Oryzias_latipes
ENSXETG00000014420	yrdc	86	63.235	ENSORLG00020019663	yrdc	76	63.235	Oryzias_latipes_hni
ENSXETG00000014420	yrdc	85	62.562	ENSORLG00015004625	yrdc	76	62.562	Oryzias_latipes_hsok
ENSXETG00000014420	yrdc	86	64.216	ENSOMEG00000018550	yrdc	77	64.216	Oryzias_melastigma
ENSXETG00000014420	yrdc	98	60.515	ENSOGAG00000030474	YRDC	84	60.515	Otolemur_garnettii
ENSXETG00000014420	yrdc	97	63.362	ENSOARG00000019873	YRDC	82	63.362	Ovis_aries
ENSXETG00000014420	yrdc	61	73.611	ENSPPAG00000039722	-	97	73.611	Pan_paniscus
ENSXETG00000014420	yrdc	97	62.500	ENSPPRG00000007752	YRDC	82	62.232	Panthera_pardus
ENSXETG00000014420	yrdc	95	54.386	ENSPTIG00000019821	YRDC	95	54.386	Panthera_tigris_altaica
ENSXETG00000014420	yrdc	97	62.069	ENSPTRG00000000557	YRDC	82	61.803	Pan_troglodytes
ENSXETG00000014420	yrdc	97	63.362	ENSPANG00000006487	YRDC	62	63.362	Papio_anubis
ENSXETG00000014420	yrdc	87	65.049	ENSPKIG00000004574	yrdc	75	65.049	Paramormyrops_kingsleyae
ENSXETG00000014420	yrdc	88	72.727	ENSPSIG00000006483	YRDC	74	72.727	Pelodiscus_sinensis
ENSXETG00000014420	yrdc	98	59.829	ENSPMGG00000004184	yrdc	84	59.829	Periophthalmus_magnuspinnatus
ENSXETG00000014420	yrdc	74	67.429	ENSPEMG00000016985	Yrdc	76	67.429	Peromyscus_maniculatus_bairdii
ENSXETG00000014420	yrdc	74	55.367	ENSPMAG00000002905	yrdc	96	55.367	Petromyzon_marinus
ENSXETG00000014420	yrdc	90	66.355	ENSPCIG00000025731	YRDC	77	66.355	Phascolarctos_cinereus
ENSXETG00000014420	yrdc	89	64.623	ENSPFOG00000023097	yrdc	77	64.623	Poecilia_formosa
ENSXETG00000014420	yrdc	87	64.904	ENSPLAG00000020882	yrdc	76	64.904	Poecilia_latipinna
ENSXETG00000014420	yrdc	87	65.385	ENSPMEG00000013237	yrdc	77	65.385	Poecilia_mexicana
ENSXETG00000014420	yrdc	87	65.385	ENSPREG00000005285	yrdc	76	65.385	Poecilia_reticulata
ENSXETG00000014420	yrdc	88	66.190	ENSPPYG00000001523	-	86	66.190	Pongo_abelii
ENSXETG00000014420	yrdc	98	62.232	ENSPCAG00000016850	YRDC	82	62.232	Procavia_capensis
ENSXETG00000014420	yrdc	97	63.793	ENSPCOG00000013214	YRDC	82	63.519	Propithecus_coquereli
ENSXETG00000014420	yrdc	97	62.069	ENSPVAG00000010147	YRDC	82	62.069	Pteropus_vampyrus
ENSXETG00000014420	yrdc	98	63.136	ENSPNYG00000013956	yrdc	85	63.136	Pundamilia_nyererei
ENSXETG00000014420	yrdc	88	62.201	ENSPNAG00000015625	yrdc	84	62.201	Pygocentrus_nattereri
ENSXETG00000014420	yrdc	89	65.728	ENSRNOG00000025424	Yrdc	82	63.362	Rattus_norvegicus
ENSXETG00000014420	yrdc	97	62.931	ENSRBIG00000032289	YRDC	82	62.661	Rhinopithecus_bieti
ENSXETG00000014420	yrdc	86	66.341	ENSRROG00000039370	YRDC	70	66.341	Rhinopithecus_roxellana
ENSXETG00000014420	yrdc	84	67.337	ENSSBOG00000018937	YRDC	90	63.679	Saimiri_boliviensis_boliviensis
ENSXETG00000014420	yrdc	62	71.429	ENSSHAG00000013957	-	99	71.429	Sarcophilus_harrisii
ENSXETG00000014420	yrdc	87	66.346	ENSSFOG00015006128	yrdc	89	66.346	Scleropages_formosus
ENSXETG00000014420	yrdc	99	61.826	ENSSMAG00000005195	yrdc	88	61.826	Scophthalmus_maximus
ENSXETG00000014420	yrdc	99	61.826	ENSSDUG00000009775	yrdc	87	61.826	Seriola_dumerili
ENSXETG00000014420	yrdc	76	30.526	ENSSDUG00000006736	-	84	30.526	Seriola_dumerili
ENSXETG00000014420	yrdc	68	31.176	ENSSDUG00000006631	-	71	31.176	Seriola_dumerili
ENSXETG00000014420	yrdc	55	33.582	ENSSLDG00000008694	-	65	33.582	Seriola_lalandi_dorsalis
ENSXETG00000014420	yrdc	99	61.826	ENSSLDG00000003196	yrdc	87	61.826	Seriola_lalandi_dorsalis
ENSXETG00000014420	yrdc	93	68.220	ENSSPUG00000003946	YRDC	91	68.220	Sphenodon_punctatus
ENSXETG00000014420	yrdc	99	59.751	ENSSPAG00000012559	yrdc	88	59.751	Stegastes_partitus
ENSXETG00000014420	yrdc	97	64.224	ENSSSCG00000040425	YRDC	82	64.224	Sus_scrofa
ENSXETG00000014420	yrdc	61	79.452	ENSTGUG00000001507	YRDC	99	79.452	Taeniopygia_guttata
ENSXETG00000014420	yrdc	87	62.500	ENSTRUG00000005923	yrdc	76	64.904	Takifugu_rubripes
ENSXETG00000014420	yrdc	63	70.667	ENSTBEG00000008863	YRDC	96	70.667	Tupaia_belangeri
ENSXETG00000014420	yrdc	60	74.825	ENSTTRG00000013538	-	96	74.825	Tursiops_truncatus
ENSXETG00000014420	yrdc	83	68.687	ENSUAMG00000006150	YRDC	98	68.687	Ursus_americanus
ENSXETG00000014420	yrdc	97	48.696	ENSVPAG00000006642	YRDC	97	48.696	Vicugna_pacos
ENSXETG00000014420	yrdc	98	60.684	ENSXCOG00000000829	yrdc	96	60.684	Xiphophorus_couchianus
ENSXETG00000014420	yrdc	87	63.942	ENSXMAG00000014606	yrdc	72	63.942	Xiphophorus_maculatus