EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000014472 (Gene tree)
Gene ID: -
Gene Symbol: npm3
Alias: -
Full Name: Xenopus tropicalis nucleophosmin/nucleoplasmin 3 (npm3)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 17924 bases
Position: chrGL172874.1:445050-462973
Accession: NM_001016456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000031667	Nucleoplasmin	PF03066.15	5.2e-39	1	1
ENSXETP00000061731	Nucleoplasmin	PF03066.15	4.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000031667	-	2140	-	ENSXETP00000031667	171 (aa)	-	F6V0N4
ENSXETT00000064211	-	768	-	ENSXETP00000061731	184 (aa)	-	F6PML8

Gene Model

Click here to download ENSXETG00000014472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000014472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000014472	npm3	69	45.763	ENSXETG00000016499	-	82	47.222
ENSXETG00000014472	npm3	66	44.737	ENSXETG00000010542	npm2	81	40.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000014472	npm3	65	58.929	ENSG00000107833	NPM3	81	46.341	Homo_sapiens
ENSXETG00000014472	npm3	85	54.110	ENSAPOG00000013083	npm3	88	45.679	Acanthochromis_polyacanthus
ENSXETG00000014472	npm3	94	38.506	ENSAMEG00000019414	-	91	39.080	Ailuropoda_melanoleuca
ENSXETG00000014472	npm3	68	57.627	ENSAMEG00000017639	-	81	47.561	Ailuropoda_melanoleuca
ENSXETG00000014472	npm3	61	56.604	ENSACIG00000022586	npm3	83	46.541	Amphilophus_citrinellus
ENSXETG00000014472	npm3	62	57.547	ENSAOCG00000009376	npm3	88	47.239	Amphiprion_ocellaris
ENSXETG00000014472	npm3	62	57.547	ENSAPEG00000015863	npm3	88	47.239	Amphiprion_percula
ENSXETG00000014472	npm3	87	53.691	ENSATEG00000022752	npm3	88	56.000	Anabas_testudineus
ENSXETG00000014472	npm3	58	58.000	ENSAPLG00000010935	NPM3	89	48.101	Anas_platyrhynchos
ENSXETG00000014472	npm3	84	54.545	ENSACAG00000011936	NPM3	98	49.697	Anolis_carolinensis
ENSXETG00000014472	npm3	68	54.237	ENSANAG00000023070	-	75	54.237	Aotus_nancymaae
ENSXETG00000014472	npm3	89	51.613	ENSANAG00000027082	-	84	47.619	Aotus_nancymaae
ENSXETG00000014472	npm3	70	54.032	ENSANAG00000023832	-	58	54.472	Aotus_nancymaae
ENSXETG00000014472	npm3	68	47.967	ENSANAG00000033290	-	92	40.000	Aotus_nancymaae
ENSXETG00000014472	npm3	87	50.336	ENSACLG00000007854	npm3	88	48.667	Astatotilapia_calliptera
ENSXETG00000014472	npm3	62	59.434	ENSAMXG00000039828	npm3	55	59.434	Astyanax_mexicanus
ENSXETG00000014472	npm3	70	56.667	ENSBTAG00000016335	NPM3	85	45.763	Bos_taurus
ENSXETG00000014472	npm3	88	51.656	ENSCJAG00000017650	NPM3	81	47.561	Callithrix_jacchus
ENSXETG00000014472	npm3	68	57.627	ENSCAFG00000009919	NPM3	71	45.614	Canis_familiaris
ENSXETG00000014472	npm3	68	57.627	ENSCAFG00020009185	NPM3	81	45.614	Canis_lupus_dingo
ENSXETG00000014472	npm3	70	56.667	ENSCHIG00000024055	-	84	50.000	Capra_hircus
ENSXETG00000014472	npm3	71	34.426	ENSCHIG00000016052	-	71	37.705	Capra_hircus
ENSXETG00000014472	npm3	53	38.043	ENSCAPG00000016606	NPM3	70	33.088	Cavia_aperea
ENSXETG00000014472	npm3	88	50.331	ENSCPOG00000006301	NPM3	81	47.879	Cavia_porcellus
ENSXETG00000014472	npm3	94	43.114	ENSCCAG00000029457	-	92	40.000	Cebus_capucinus
ENSXETG00000014472	npm3	66	59.483	ENSCCAG00000031043	-	84	48.810	Cebus_capucinus
ENSXETG00000014472	npm3	68	56.780	ENSCATG00000013755	NPM3	81	46.341	Cercocebus_atys
ENSXETG00000014472	npm3	68	56.780	ENSCSAG00000005509	NPM3	81	46.341	Chlorocebus_sabaeus
ENSXETG00000014472	npm3	84	46.528	ENSCPBG00000003817	NPM3	85	47.619	Chrysemys_picta_bellii
ENSXETG00000014472	npm3	89	50.980	ENSCANG00000020300	NPM3	82	46.386	Colobus_angolensis_palliatus
ENSXETG00000014472	npm3	67	54.310	ENSCGRG00001013345	Npm3	67	54.237	Cricetulus_griseus_chok1gshd
ENSXETG00000014472	npm3	73	48.855	ENSCGRG00000015351	Npm3	81	49.242	Cricetulus_griseus_crigri
ENSXETG00000014472	npm3	87	52.866	ENSCSEG00000007944	npm3	89	51.592	Cynoglossus_semilaevis
ENSXETG00000014472	npm3	68	51.667	ENSCVAG00000003305	npm3	94	45.665	Cyprinodon_variegatus
ENSXETG00000014472	npm3	62	58.491	ENSDARG00000103594	npm3	88	48.148	Danio_rerio
ENSXETG00000014472	npm3	71	54.472	ENSDORG00000003491	Npm3	84	45.614	Dipodomys_ordii
ENSXETG00000014472	npm3	65	57.143	ENSETEG00000006307	NPM3	66	56.780	Echinops_telfairi
ENSXETG00000014472	npm3	88	51.656	ENSEASG00005008834	NPM3	81	47.561	Equus_asinus_asinus
ENSXETG00000014472	npm3	88	51.656	ENSECAG00000007524	NPM3	81	47.561	Equus_caballus
ENSXETG00000014472	npm3	67	57.759	ENSELUG00000021730	npm3	83	51.701	Esox_lucius
ENSXETG00000014472	npm3	68	55.932	ENSFCAG00000007178	NPM3	81	46.341	Felis_catus
ENSXETG00000014472	npm3	71	52.459	ENSFALG00000008586	NPM3	92	45.882	Ficedula_albicollis
ENSXETG00000014472	npm3	65	47.748	ENSFDAG00000016537	NPM3	94	44.800	Fukomys_damarensis
ENSXETG00000014472	npm3	68	54.701	ENSFHEG00000003983	npm3	93	45.882	Fundulus_heteroclitus
ENSXETG00000014472	npm3	91	46.452	ENSGMOG00000004317	npm3	95	43.452	Gadus_morhua
ENSXETG00000014472	npm3	86	53.061	ENSGALG00000032329	NPM3	94	50.340	Gallus_gallus
ENSXETG00000014472	npm3	64	56.881	ENSGAFG00000009135	npm3	88	45.294	Gambusia_affinis
ENSXETG00000014472	npm3	91	50.318	ENSGACG00000007294	npm3	91	45.833	Gasterosteus_aculeatus
ENSXETG00000014472	npm3	96	45.562	ENSGAGG00000004081	NPM3	90	42.857	Gopherus_agassizii
ENSXETG00000014472	npm3	65	58.929	ENSGGOG00000027500	NPM3	81	46.341	Gorilla_gorilla
ENSXETG00000014472	npm3	63	57.009	ENSHBUG00000023704	npm3	88	48.667	Haplochromis_burtoni
ENSXETG00000014472	npm3	68	56.780	ENSHGLG00000019118	NPM3	92	45.405	Heterocephalus_glaber_female
ENSXETG00000014472	npm3	61	58.491	ENSHGLG00100010926	NPM3	96	48.366	Heterocephalus_glaber_male
ENSXETG00000014472	npm3	87	52.667	ENSHCOG00000019322	npm3	87	49.669	Hippocampus_comes
ENSXETG00000014472	npm3	88	49.333	ENSIPUG00000008204	npm3	88	49.333	Ictalurus_punctatus
ENSXETG00000014472	npm3	65	58.036	ENSSTOG00000022621	NPM3	81	46.951	Ictidomys_tridecemlineatus
ENSXETG00000014472	npm3	68	57.627	ENSJJAG00000018907	Npm3	67	57.627	Jaculus_jaculus
ENSXETG00000014472	npm3	62	54.717	ENSKMAG00000020800	npm3	87	52.703	Kryptolebias_marmoratus
ENSXETG00000014472	npm3	87	53.691	ENSLBEG00000015651	npm3	88	53.333	Labrus_bergylta
ENSXETG00000014472	npm3	85	55.479	ENSLOCG00000000705	-	86	52.349	Lepisosteus_oculatus
ENSXETG00000014472	npm3	68	57.627	ENSLAFG00000023022	NPM3	73	57.627	Loxodonta_africana
ENSXETG00000014472	npm3	68	56.780	ENSMFAG00000041878	NPM3	81	46.341	Macaca_fascicularis
ENSXETG00000014472	npm3	65	57.522	ENSMMUG00000015774	NPM3	79	46.541	Macaca_mulatta
ENSXETG00000014472	npm3	68	56.780	ENSMNEG00000039999	NPM3	81	46.341	Macaca_nemestrina
ENSXETG00000014472	npm3	68	56.780	ENSMLEG00000038129	NPM3	81	46.341	Mandrillus_leucophaeus
ENSXETG00000014472	npm3	85	49.315	ENSMAMG00000002698	npm3	93	49.367	Mastacembelus_armatus
ENSXETG00000014472	npm3	67	55.172	ENSMZEG00005003091	npm3	88	48.667	Maylandia_zebra
ENSXETG00000014472	npm3	65	55.357	ENSMAUG00000015218	Npm3	67	54.237	Mesocricetus_auratus
ENSXETG00000014472	npm3	68	57.627	ENSMICG00000044119	NPM3	81	47.561	Microcebus_murinus
ENSXETG00000014472	npm3	68	55.932	ENSMOCG00000013601	Npm3	81	45.732	Microtus_ochrogaster
ENSXETG00000014472	npm3	85	54.795	ENSMMOG00000010681	npm3	86	53.741	Mola_mola
ENSXETG00000014472	npm3	70	53.782	ENSMODG00000011689	NPM3	82	43.860	Monodelphis_domestica
ENSXETG00000014472	npm3	91	54.088	ENSMALG00000016787	npm3	93	55.346	Monopterus_albus
ENSXETG00000014472	npm3	68	56.780	MGP_CAROLIEiJ_G0023020	Npm3	67	56.780	Mus_caroli
ENSXETG00000014472	npm3	68	55.932	ENSMUSG00000056209	Npm3	81	44.706	Mus_musculus
ENSXETG00000014472	npm3	68	56.780	MGP_PahariEiJ_G0014510	Npm3	68	56.780	Mus_pahari
ENSXETG00000014472	npm3	68	55.932	MGP_SPRETEiJ_G0023941	Npm3	81	44.706	Mus_spretus
ENSXETG00000014472	npm3	68	57.627	ENSMPUG00000016894	NPM3	67	57.627	Mustela_putorius_furo
ENSXETG00000014472	npm3	65	57.143	ENSMLUG00000004961	NPM3	81	44.512	Myotis_lucifugus
ENSXETG00000014472	npm3	65	55.357	ENSNGAG00000000155	-	71	53.782	Nannospalax_galili
ENSXETG00000014472	npm3	68	55.932	ENSNGAG00000022833	-	81	46.471	Nannospalax_galili
ENSXETG00000014472	npm3	62	48.113	ENSNBRG00000009627	npm3	71	42.500	Neolamprologus_brichardi
ENSXETG00000014472	npm3	68	55.085	ENSNLEG00000018637	-	81	46.341	Nomascus_leucogenys
ENSXETG00000014472	npm3	68	56.780	ENSNLEG00000029281	-	81	46.341	Nomascus_leucogenys
ENSXETG00000014472	npm3	58	44.444	ENSMEUG00000004931	-	100	45.455	Notamacropus_eugenii
ENSXETG00000014472	npm3	58	48.485	ENSMEUG00000002619	-	100	48.485	Notamacropus_eugenii
ENSXETG00000014472	npm3	62	55.660	ENSMEUG00000003465	-	77	55.660	Notamacropus_eugenii
ENSXETG00000014472	npm3	88	50.000	ENSOPRG00000009229	NPM3	67	54.237	Ochotona_princeps
ENSXETG00000014472	npm3	88	47.368	ENSODEG00000006704	NPM3	83	45.181	Octodon_degus
ENSXETG00000014472	npm3	87	50.331	ENSONIG00000009513	npm3	87	46.951	Oreochromis_niloticus
ENSXETG00000014472	npm3	68	57.627	ENSOCUG00000016819	NPM3	81	47.561	Oryctolagus_cuniculus
ENSXETG00000014472	npm3	62	57.547	ENSORLG00000008492	npm3	75	57.547	Oryzias_latipes
ENSXETG00000014472	npm3	62	57.547	ENSORLG00020002450	npm3	87	45.509	Oryzias_latipes_hni
ENSXETG00000014472	npm3	85	50.676	ENSORLG00015006856	npm3	87	45.283	Oryzias_latipes_hsok
ENSXETG00000014472	npm3	67	53.913	ENSOMEG00000002666	npm3	92	46.795	Oryzias_melastigma
ENSXETG00000014472	npm3	68	58.475	ENSOGAG00000010001	NPM3	81	48.171	Otolemur_garnettii
ENSXETG00000014472	npm3	70	56.667	ENSOARG00000016916	NPM3	84	50.000	Ovis_aries
ENSXETG00000014472	npm3	65	58.929	ENSPPAG00000040517	NPM3	81	46.341	Pan_paniscus
ENSXETG00000014472	npm3	68	55.932	ENSPPRG00000012611	-	81	46.341	Panthera_pardus
ENSXETG00000014472	npm3	68	55.932	ENSPTIG00000005390	NPM3	81	46.341	Panthera_tigris_altaica
ENSXETG00000014472	npm3	65	58.929	ENSPTRG00000002875	NPM3	81	46.341	Pan_troglodytes
ENSXETG00000014472	npm3	68	56.780	ENSPANG00000021046	NPM3	81	46.341	Papio_anubis
ENSXETG00000014472	npm3	85	43.151	ENSPKIG00000007609	npm3	71	41.509	Paramormyrops_kingsleyae
ENSXETG00000014472	npm3	87	51.678	ENSPMGG00000020204	npm3	90	51.634	Periophthalmus_magnuspinnatus
ENSXETG00000014472	npm3	69	54.918	ENSPEMG00000007731	Npm3	84	45.833	Peromyscus_maniculatus_bairdii
ENSXETG00000014472	npm3	69	55.085	ENSPFOG00000014692	npm3	93	45.882	Poecilia_formosa
ENSXETG00000014472	npm3	69	55.085	ENSPLAG00000009956	npm3	93	45.882	Poecilia_latipinna
ENSXETG00000014472	npm3	59	56.436	ENSPMEG00000011795	npm3	89	44.937	Poecilia_mexicana
ENSXETG00000014472	npm3	63	57.009	ENSPREG00000020765	npm3	87	46.746	Poecilia_reticulata
ENSXETG00000014472	npm3	88	51.974	ENSPPYG00000002589	NPM3	71	47.561	Pongo_abelii
ENSXETG00000014472	npm3	68	57.627	ENSPCOG00000014704	NPM3	81	47.561	Propithecus_coquereli
ENSXETG00000014472	npm3	68	56.780	ENSPVAG00000004038	NPM3	81	47.561	Pteropus_vampyrus
ENSXETG00000014472	npm3	67	56.034	ENSPNYG00000009300	npm3	88	49.333	Pundamilia_nyererei
ENSXETG00000014472	npm3	67	55.652	ENSPNAG00000014779	npm3	90	50.327	Pygocentrus_nattereri
ENSXETG00000014472	npm3	68	57.627	ENSRNOG00000017622	Npm3	68	57.627	Rattus_norvegicus
ENSXETG00000014472	npm3	88	51.656	ENSRBIG00000039086	-	81	46.951	Rhinopithecus_bieti
ENSXETG00000014472	npm3	82	52.857	ENSRBIG00000042048	-	84	47.712	Rhinopithecus_bieti
ENSXETG00000014472	npm3	88	51.656	ENSRROG00000029912	NPM3	81	46.951	Rhinopithecus_roxellana
ENSXETG00000014472	npm3	70	55.372	ENSSBOG00000027661	NPM3	85	45.732	Saimiri_boliviensis_boliviensis
ENSXETG00000014472	npm3	74	49.206	ENSSHAG00000008567	NPM3	71	50.000	Sarcophilus_harrisii
ENSXETG00000014472	npm3	68	55.556	ENSSFOG00015013651	npm3	95	47.826	Scleropages_formosus
ENSXETG00000014472	npm3	87	57.047	ENSSMAG00000003907	npm3	88	54.000	Scophthalmus_maximus
ENSXETG00000014472	npm3	87	57.718	ENSSDUG00000022843	npm3	88	54.000	Seriola_dumerili
ENSXETG00000014472	npm3	87	57.047	ENSSLDG00000002811	npm3	88	54.000	Seriola_lalandi_dorsalis
ENSXETG00000014472	npm3	92	46.914	ENSSPUG00000011875	NPM3	89	47.097	Sphenodon_punctatus
ENSXETG00000014472	npm3	65	54.955	ENSSPAG00000002553	npm3	91	49.677	Stegastes_partitus
ENSXETG00000014472	npm3	88	50.993	ENSSSCG00000010568	NPM3	81	49.342	Sus_scrofa
ENSXETG00000014472	npm3	69	55.932	ENSTGUG00000009948	NPM3	88	55.932	Taeniopygia_guttata
ENSXETG00000014472	npm3	94	50.000	ENSTRUG00000011661	npm3	95	49.689	Takifugu_rubripes
ENSXETG00000014472	npm3	73	53.968	ENSTNIG00000016518	npm3	73	54.331	Tetraodon_nigroviridis
ENSXETG00000014472	npm3	68	57.627	ENSUAMG00000024072	NPM3	59	47.561	Ursus_americanus
ENSXETG00000014472	npm3	68	57.627	ENSUMAG00000023016	NPM3	59	47.561	Ursus_maritimus
ENSXETG00000014472	npm3	68	57.627	ENSVPAG00000003120	NPM3	81	47.059	Vicugna_pacos
ENSXETG00000014472	npm3	68	57.627	ENSVVUG00000000945	NPM3	71	45.614	Vulpes_vulpes
ENSXETG00000014472	npm3	74	55.118	ENSXCOG00000012121	npm3	94	50.311	Xiphophorus_couchianus
ENSXETG00000014472	npm3	74	55.118	ENSXMAG00000013473	npm3	94	50.311	Xiphophorus_maculatus