EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXETG00000014597 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
-
Full Name
Xenopus tropicalis poly(A) binding protein%2C nuclear 1 (pabpn1)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Minus strand
Length
6260 bases
Position
chrGL173075.1:154058-160317
Accession
NM_001001230
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000031935RRM_1PF00076.221e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000031935-1642-ENSXETP00000031935296 (aa)-Q6NVP7
Gene Model
Click here to download ENSXETG00000014597's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000014597's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXETG00000014597pabpn15356.897ENSXETG00000011258pabpn1l9053.883
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000014597pabpn16493.651ENSG00000258643BCL2L2-PABPN15791.005Homo_sapiens
ENSXETG00000014597pabpn16692.893ENSG00000100836PABPN19489.820Homo_sapiens
ENSXETG00000014597pabpn17382.407ENSAPOG00000016425pabpn18485.714Acanthochromis_polyacanthus
ENSXETG00000014597pabpn16493.651ENSAMEG00000007048BCL2L2-PABPN110091.005Ailuropoda_melanoleuca
ENSXETG00000014597pabpn17178.140ENSACIG00000021744pabpn19484.431Amphilophus_citrinellus
ENSXETG00000014597pabpn17382.407ENSAOCG00000015805pabpn18485.714Amphiprion_ocellaris
ENSXETG00000014597pabpn17382.407ENSAPEG00000009623pabpn18485.714Amphiprion_percula
ENSXETG00000014597pabpn17382.870ENSATEG00000020531pabpn18486.224Anabas_testudineus
ENSXETG00000014597pabpn16492.105ENSACAG00000006185-6789.474Anolis_carolinensis
ENSXETG00000014597pabpn16692.893ENSANAG00000024513-7190.306Aotus_nancymaae
ENSXETG00000014597pabpn17177.778ENSACLG00000016374pabpn16780.612Astatotilapia_calliptera
ENSXETG00000014597pabpn17382.028ENSAMXG00000000452pabpn19484.524Astyanax_mexicanus
ENSXETG00000014597pabpn16682.564ENSBTAG00000050594-6980.513Bos_taurus
ENSXETG00000014597pabpn16692.893ENSBTAG00000006884PABPN16490.306Bos_taurus
ENSXETG00000014597pabpn16492.147ENSBTAG00000053753-7189.529Bos_taurus
ENSXETG00000014597pabpn15058.667WBGene00003904pabp-27359.333Caenorhabditis_elegans
ENSXETG00000014597pabpn16692.893ENSCJAG00000007960-7390.306Callithrix_jacchus
ENSXETG00000014597pabpn15691.018ENSCJAG00000004407-8488.024Callithrix_jacchus
ENSXETG00000014597pabpn17586.486ENSCAFG00000011482PABPN16490.306Canis_familiaris
ENSXETG00000014597pabpn16692.893ENSCAFG00020006651-6490.306Canis_lupus_dingo
ENSXETG00000014597pabpn16692.893ENSCAFG00020007298-6490.306Canis_lupus_dingo
ENSXETG00000014597pabpn16692.893ENSCHIG00000012184PABPN16490.306Capra_hircus
ENSXETG00000014597pabpn16493.651ENSTSYG00000033996BCL2L2-PABPN19489.820Carlito_syrichta
ENSXETG00000014597pabpn17089.372ENSCPOG00000025574PABPN16489.796Cavia_porcellus
ENSXETG00000014597pabpn16692.893ENSCCAG00000033954BCL2L2-PABPN17390.306Cebus_capucinus
ENSXETG00000014597pabpn16692.893ENSCATG00000038536BCL2L2-PABPN17390.306Cercocebus_atys
ENSXETG00000014597pabpn15091.333ENSCLAG00000012423PABPN15688.000Chinchilla_lanigera
ENSXETG00000014597pabpn16691.371ENSCSAG00000016036PABPN16488.776Chlorocebus_sabaeus
ENSXETG00000014597pabpn16486.243ENSCHOG00000004798BCL2L2-PABPN18183.598Choloepus_hoffmanni
ENSXETG00000014597pabpn15690.419ENSCPBG00000026060-9488.623Chrysemys_picta_bellii
ENSXETG00000014597pabpn16464.211ENSCING00000012468-8066.316Ciona_intestinalis
ENSXETG00000014597pabpn16061.582ENSCSAVG00000002001-9362.048Ciona_savignyi
ENSXETG00000014597pabpn16493.651ENSCANG00000009750BCL2L2-PABPN19489.820Colobus_angolensis_palliatus
ENSXETG00000014597pabpn16679.695ENSCANG00000030980-6976.166Colobus_angolensis_palliatus
ENSXETG00000014597pabpn16692.386ENSCGRG00001019696Pabpn19489.222Cricetulus_griseus_chok1gshd
ENSXETG00000014597pabpn15692.216ENSCGRG00000011102Pabpn19197.279Cricetulus_griseus_crigri
ENSXETG00000014597pabpn17380.556ENSCSEG00000008774pabpn18484.184Cynoglossus_semilaevis
ENSXETG00000014597pabpn17380.184ENSCVAG00000003152pabpn18482.741Cyprinodon_variegatus
ENSXETG00000014597pabpn17381.944ENSDARG00000045373pabpn18485.204Danio_rerio
ENSXETG00000014597pabpn16692.893ENSDNOG00000023682PABPN16490.306Dasypus_novemcinctus
ENSXETG00000014597pabpn17089.372ENSDORG00000028966-6489.796Dipodomys_ordii
ENSXETG00000014597pabpn16463.158FBgn0005648Pabp28262.632Drosophila_melanogaster
ENSXETG00000014597pabpn16580.000ENSEBUG00000002322pabpn18480.000Eptatretus_burgeri
ENSXETG00000014597pabpn16692.893ENSEASG00005011716PABPN16490.306Equus_asinus_asinus
ENSXETG00000014597pabpn16593.264ENSECAG00000011652PABPN16290.761Equus_caballus
ENSXETG00000014597pabpn17185.446ENSEEUG00000012973-6786.735Erinaceus_europaeus
ENSXETG00000014597pabpn17382.949ENSELUG00000022654pabpn18284.772Esox_lucius
ENSXETG00000014597pabpn16692.893ENSFCAG00000031922PABPN16490.306Felis_catus
ENSXETG00000014597pabpn15692.216ENSFDAG00000018381BCL2L2-PABPN19489.222Fukomys_damarensis
ENSXETG00000014597pabpn17376.389ENSFHEG00000007215pabpn18479.487Fundulus_heteroclitus
ENSXETG00000014597pabpn17080.095ENSGMOG00000003922pabpn16485.405Gadus_morhua
ENSXETG00000014597pabpn16586.154ENSGALG00000052930-5886.364Gallus_gallus
ENSXETG00000014597pabpn17380.734ENSGAFG00000017099pabpn18482.828Gambusia_affinis
ENSXETG00000014597pabpn16982.843ENSGACG00000002167pabpn18579.904Gasterosteus_aculeatus
ENSXETG00000014597pabpn16977.512ENSGGOG00000025919-9877.027Gorilla_gorilla
ENSXETG00000014597pabpn16692.893ENSGGOG00000022683-7390.306Gorilla_gorilla
ENSXETG00000014597pabpn17670.925ENSGGOG00000039675-7375.000Gorilla_gorilla
ENSXETG00000014597pabpn17381.944ENSHBUG00000019523pabpn18485.204Haplochromis_burtoni
ENSXETG00000014597pabpn15670.482ENSHGLG00000009842-9368.639Heterocephalus_glaber_female
ENSXETG00000014597pabpn17089.372ENSHGLG00000002927-9297.279Heterocephalus_glaber_female
ENSXETG00000014597pabpn16976.812ENSHGLG00000018588-6575.258Heterocephalus_glaber_female
ENSXETG00000014597pabpn15993.785ENSHGLG00100006673-9297.279Heterocephalus_glaber_male
ENSXETG00000014597pabpn16976.812ENSHGLG00100015565-6775.258Heterocephalus_glaber_male
ENSXETG00000014597pabpn15677.844ENSHGLG00100018935-9477.844Heterocephalus_glaber_male
ENSXETG00000014597pabpn17378.140ENSHCOG00000004655pabpn18484.694Hippocampus_comes
ENSXETG00000014597pabpn17382.407ENSIPUG00000008085PABPN18485.714Ictalurus_punctatus
ENSXETG00000014597pabpn16980.583ENSIPUG00000000180-8682.143Ictalurus_punctatus
ENSXETG00000014597pabpn15692.814ENSSTOG00000029847BCL2L2-PABPN19489.820Ictidomys_tridecemlineatus
ENSXETG00000014597pabpn15692.814ENSJJAG00000023507Gm205219489.820Jaculus_jaculus
ENSXETG00000014597pabpn17380.645ENSKMAG00000018748pabpn18484.772Kryptolebias_marmoratus
ENSXETG00000014597pabpn17382.870ENSLBEG00000027266pabpn18486.224Labrus_bergylta
ENSXETG00000014597pabpn15994.350ENSLACG00000000646pabpn17993.296Latimeria_chalumnae
ENSXETG00000014597pabpn16865.174ENSLOCG00000004694pabpn1l9063.590Lepisosteus_oculatus
ENSXETG00000014597pabpn16982.843ENSLOCG00000000796pabpn16686.413Lepisosteus_oculatus
ENSXETG00000014597pabpn15192.053ENSLAFG00000031227-10088.742Loxodonta_africana
ENSXETG00000014597pabpn16493.651ENSMFAG00000032183BCL2L2-PABPN19489.820Macaca_fascicularis
ENSXETG00000014597pabpn16576.684ENSMMUG00000048382-6475.130Macaca_mulatta
ENSXETG00000014597pabpn16493.651ENSMMUG00000014747BCL2L2-PABPN110088.356Macaca_mulatta
ENSXETG00000014597pabpn16692.893ENSMNEG00000045065BCL2L2-PABPN17390.306Macaca_nemestrina
ENSXETG00000014597pabpn16376.344ENSMNEG00000035750-9982.979Macaca_nemestrina
ENSXETG00000014597pabpn15675.000ENSMLEG00000034623-9978.571Mandrillus_leucophaeus
ENSXETG00000014597pabpn16493.651ENSMLEG00000043862BCL2L2-PABPN19489.820Mandrillus_leucophaeus
ENSXETG00000014597pabpn16983.333ENSMAMG00000007979pabpn16686.010Mastacembelus_armatus
ENSXETG00000014597pabpn16982.353ENSMZEG00005011904pabpn16485.870Maylandia_zebra
ENSXETG00000014597pabpn16692.386ENSMAUG00000007383Gm205216689.796Mesocricetus_auratus
ENSXETG00000014597pabpn16692.893ENSMICG00000010002BCL2L2-PABPN17390.306Microcebus_murinus
ENSXETG00000014597pabpn16691.878ENSMOCG00000018557Gm205219097.279Microtus_ochrogaster
ENSXETG00000014597pabpn17382.407ENSMMOG00000005405pabpn18485.714Mola_mola
ENSXETG00000014597pabpn16591.237ENSMODG00000004535-6388.601Monodelphis_domestica
ENSXETG00000014597pabpn16983.333ENSMALG00000019612pabpn16586.010Monopterus_albus
ENSXETG00000014597pabpn16491.534MGP_CAROLIEiJ_G0019276Gm205215788.889Mus_caroli
ENSXETG00000014597pabpn16690.863MGP_CAROLIEiJ_G0019277Pabpn19096.599Mus_caroli
ENSXETG00000014597pabpn16492.063ENSMUSG00000092232Gm205215789.418Mus_musculus
ENSXETG00000014597pabpn16691.371ENSMUSG00000022194Pabpn19096.599Mus_musculus
ENSXETG00000014597pabpn16492.063MGP_PahariEiJ_G0030294Gm205215789.418Mus_pahari
ENSXETG00000014597pabpn16691.371MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSXETG00000014597pabpn16492.063MGP_SPRETEiJ_G0020165Gm205215789.418Mus_spretus
ENSXETG00000014597pabpn16691.371MGP_SPRETEiJ_G0020166Pabpn19096.599Mus_spretus
ENSXETG00000014597pabpn15293.548ENSMPUG00000006775-9290.323Mustela_putorius_furo
ENSXETG00000014597pabpn16985.782ENSMLUG00000012452-6585.859Myotis_lucifugus
ENSXETG00000014597pabpn16689.848ENSMLUG00000028677-7286.735Myotis_lucifugus
ENSXETG00000014597pabpn16491.534ENSMLUG00000003800-10088.889Myotis_lucifugus
ENSXETG00000014597pabpn16493.651ENSNGAG00000019529Gm205215791.005Nannospalax_galili
ENSXETG00000014597pabpn16982.353ENSNBRG00000023955pabpn19484.431Neolamprologus_brichardi
ENSXETG00000014597pabpn16875.000ENSNLEG00000030598-7276.923Nomascus_leucogenys
ENSXETG00000014597pabpn15065.986ENSNLEG00000035292-9965.986Nomascus_leucogenys
ENSXETG00000014597pabpn16692.893ENSNLEG00000015007-7090.306Nomascus_leucogenys
ENSXETG00000014597pabpn17079.126ENSODEG00000003739-6679.487Octodon_degus
ENSXETG00000014597pabpn17089.372ENSODEG00000002083BCL2L2-PABPN16489.796Octodon_degus
ENSXETG00000014597pabpn16080.899ENSODEG00000011555-8976.048Octodon_degus
ENSXETG00000014597pabpn16982.353ENSONIG00000008112pabpn16485.870Oreochromis_niloticus
ENSXETG00000014597pabpn16691.878ENSOCUG00000016174PABPN17289.286Oryctolagus_cuniculus
ENSXETG00000014597pabpn16884.000ENSORLG00000027900pabpn17786.559Oryzias_latipes
ENSXETG00000014597pabpn16684.103ENSORLG00020004681pabpn16585.492Oryzias_latipes_hni
ENSXETG00000014597pabpn17382.407ENSORLG00015000018pabpn18485.714Oryzias_latipes_hsok
ENSXETG00000014597pabpn16983.333ENSOMEG00000016618pabpn16982.990Oryzias_melastigma
ENSXETG00000014597pabpn16692.893ENSOGAG00000008710PABPN16490.306Otolemur_garnettii
ENSXETG00000014597pabpn16493.651ENSOARG00000019336BCL2L2-PABPN15291.005Ovis_aries
ENSXETG00000014597pabpn15676.647ENSPPAG00000039421-9373.054Pan_paniscus
ENSXETG00000014597pabpn16493.651ENSPPAG00000028984BCL2L2-PABPN19290.323Pan_paniscus
ENSXETG00000014597pabpn16692.893ENSPPRG00000010567PABPN16490.306Panthera_pardus
ENSXETG00000014597pabpn15692.814ENSPTIG00000001063BCL2L2-PABPN19489.820Panthera_tigris_altaica
ENSXETG00000014597pabpn16692.893ENSPTRG00000006167BCL2L27390.306Pan_troglodytes
ENSXETG00000014597pabpn17570.270ENSPTRG00000047273-7373.980Pan_troglodytes
ENSXETG00000014597pabpn16576.684ENSPANG00000023326-9984.397Papio_anubis
ENSXETG00000014597pabpn16692.893ENSPANG00000021100BCL2L2-PABPN17390.306Papio_anubis
ENSXETG00000014597pabpn15570.732ENSPKIG00000008340pabpn1l7372.000Paramormyrops_kingsleyae
ENSXETG00000014597pabpn16981.863ENSPKIG00000008144-6584.456Paramormyrops_kingsleyae
ENSXETG00000014597pabpn17377.880ENSPKIG00000018052pabpn18483.249Paramormyrops_kingsleyae
ENSXETG00000014597pabpn16982.843ENSPMGG00000022027pabpn16786.413Periophthalmus_magnuspinnatus
ENSXETG00000014597pabpn16692.386ENSPEMG00000008332Gm205218897.241Peromyscus_maniculatus_bairdii
ENSXETG00000014597pabpn15087.162ENSPMAG00000006212pabpn18473.399Petromyzon_marinus
ENSXETG00000014597pabpn16691.371ENSPCIG00000027751-6488.776Phascolarctos_cinereus
ENSXETG00000014597pabpn17380.734ENSPFOG00000010351pabpn18284.103Poecilia_formosa
ENSXETG00000014597pabpn16980.583ENSPLAG00000022696pabpn16682.051Poecilia_latipinna
ENSXETG00000014597pabpn17380.734ENSPMEG00000020856pabpn18284.103Poecilia_mexicana
ENSXETG00000014597pabpn17380.734ENSPREG00000011278pabpn18482.828Poecilia_reticulata
ENSXETG00000014597pabpn16293.514ENSPPYG00000005663PABPN16590.761Pongo_abelii
ENSXETG00000014597pabpn16277.419ENSPCAG00000005902PABPN16374.595Procavia_capensis
ENSXETG00000014597pabpn16692.893ENSPCOG00000028047BCL2L2-PABPN17390.306Propithecus_coquereli
ENSXETG00000014597pabpn17285.981ENSPVAG00000005270PABPN16488.265Pteropus_vampyrus
ENSXETG00000014597pabpn17381.944ENSPNYG00000013182pabpn18485.204Pundamilia_nyererei
ENSXETG00000014597pabpn17382.407ENSPNAG00000023526pabpn18485.714Pygocentrus_nattereri
ENSXETG00000014597pabpn16763.131ENSPNAG00000021666pabpn1l9363.265Pygocentrus_nattereri
ENSXETG00000014597pabpn17088.889ENSRNOG00000042195Pabpn16589.286Rattus_norvegicus
ENSXETG00000014597pabpn16976.555ENSRBIG00000042811-8172.906Rhinopithecus_bieti
ENSXETG00000014597pabpn16978.469ENSRBIG00000039547-7076.684Rhinopithecus_bieti
ENSXETG00000014597pabpn15994.350ENSRBIG00000040762BCL2L2-PABPN15591.525Rhinopithecus_bieti
ENSXETG00000014597pabpn16973.684ENSRROG00000036409-5973.196Rhinopithecus_roxellana
ENSXETG00000014597pabpn15994.350ENSRROG00000045535BCL2L2-PABPN19489.820Rhinopithecus_roxellana
ENSXETG00000014597pabpn16978.947ENSRROG00000040409-7077.202Rhinopithecus_roxellana
ENSXETG00000014597pabpn16487.624ENSSBOG00000026930BCL2L2-PABPN19290.323Saimiri_boliviensis_boliviensis
ENSXETG00000014597pabpn16492.063ENSSHAG00000014841-8789.418Sarcophilus_harrisii
ENSXETG00000014597pabpn17368.349ENSSHAG00000007707-8273.057Sarcophilus_harrisii
ENSXETG00000014597pabpn17481.364ENSSFOG00015012565pabpn18785.204Scleropages_formosus
ENSXETG00000014597pabpn17381.019ENSSFOG00015014718pabpn18484.694Scleropages_formosus
ENSXETG00000014597pabpn16563.351ENSSFOG00015015833pabpn1l6872.973Scleropages_formosus
ENSXETG00000014597pabpn17382.870ENSSMAG00000020157pabpn18486.224Scophthalmus_maximus
ENSXETG00000014597pabpn16983.333ENSSDUG00000020582pabpn16586.010Seriola_dumerili
ENSXETG00000014597pabpn17382.870ENSSLDG00000007118pabpn18486.224Seriola_lalandi_dorsalis
ENSXETG00000014597pabpn15691.018ENSSPUG00000018308-9489.222Sphenodon_punctatus
ENSXETG00000014597pabpn17382.028ENSSPAG00000021658pabpn18484.264Stegastes_partitus
ENSXETG00000014597pabpn17664.935ENSSSCG00000034805-7262.051Sus_scrofa
ENSXETG00000014597pabpn15952.000ENSSSCG00000038472-9149.398Sus_scrofa
ENSXETG00000014597pabpn16692.893ENSSSCG00000002023PABPN16490.306Sus_scrofa
ENSXETG00000014597pabpn17383.796ENSTRUG00000023664pabpn18487.245Takifugu_rubripes
ENSXETG00000014597pabpn17381.106ENSTNIG00000005369pabpn19184.264Tetraodon_nigroviridis
ENSXETG00000014597pabpn16692.893ENSUAMG00000024460PABPN16490.306Ursus_americanus
ENSXETG00000014597pabpn16493.651ENSUMAG00000014288BCL2L2-PABPN15791.005Ursus_maritimus
ENSXETG00000014597pabpn16493.651ENSVVUG00000019912BCL2L2-PABPN17689.637Vulpes_vulpes
ENSXETG00000014597pabpn15973.446ENSXCOG00000005158pabpn18984.868Xiphophorus_couchianus
ENSXETG00000014597pabpn17381.193ENSXMAG00000006196pabpn18483.333Xiphophorus_maculatus

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