EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000014637 (Gene tree)
Gene ID: -
Gene Symbol: zc3h13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 27339 bases
Position: chrGL173325.1:126507-153845
Accession: XB-GENE-5798641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000032075	zf-CCCH	PF00642.24	1.2e-09	1	1
ENSXETP00000059718	zf-CCCH	PF00642.24	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063724	-	5366	-	ENSXETP00000059718	1656 (aa)	-	F6QAE0
ENSXETT00000032075	-	2582	-	ENSXETP00000032075	729 (aa)	-	F7DFE7

Gene Model

Click here to download ENSXETG00000014637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000014637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000014637	zc3h13	99	63.984	ENSG00000123200	ZC3H13	98	87.611	Homo_sapiens
ENSXETG00000014637	zc3h13	97	61.732	ENSAMEG00000013117	ZC3H13	73	60.764	Ailuropoda_melanoleuca
ENSXETG00000014637	zc3h13	97	49.935	ENSACIG00000001200	zc3h13	58	65.278	Amphilophus_citrinellus
ENSXETG00000014637	zc3h13	56	42.825	ENSAPEG00000004887	zc3h13	87	61.826	Amphiprion_percula
ENSXETG00000014637	zc3h13	90	76.179	ENSAPLG00000002707	ZC3H13	100	66.113	Anas_platyrhynchos
ENSXETG00000014637	zc3h13	97	48.799	ENSACLG00000027909	zc3h13	89	58.607	Astatotilapia_calliptera
ENSXETG00000014637	zc3h13	99	64.110	ENSCJAG00000016756	ZC3H13	58	62.055	Callithrix_jacchus
ENSXETG00000014637	zc3h13	97	61.592	ENSCAFG00020019269	ZC3H13	99	75.943	Canis_lupus_dingo
ENSXETG00000014637	zc3h13	98	65.331	ENSCHIG00000020072	ZC3H13	93	63.129	Capra_hircus
ENSXETG00000014637	zc3h13	98	65.884	ENSTSYG00000000992	ZC3H13	91	62.822	Carlito_syrichta
ENSXETG00000014637	zc3h13	97	59.860	ENSCPOG00000000646	ZC3H13	98	61.644	Cavia_porcellus
ENSXETG00000014637	zc3h13	97	57.143	ENSCCAG00000032728	ZC3H13	57	58.199	Cebus_capucinus
ENSXETG00000014637	zc3h13	88	85.841	ENSCHOG00000009724	ZC3H13	72	85.841	Choloepus_hoffmanni
ENSXETG00000014637	zc3h13	97	54.198	ENSCGRG00001014490	Zc3h13	72	61.911	Cricetulus_griseus_chok1gshd
ENSXETG00000014637	zc3h13	97	54.198	ENSCGRG00000002575	Zc3h13	72	61.911	Cricetulus_griseus_crigri
ENSXETG00000014637	zc3h13	96	45.174	ENSCVAG00000014663	zc3h13	51	66.818	Cyprinodon_variegatus
ENSXETG00000014637	zc3h13	97	60.894	ENSDNOG00000005390	ZC3H13	58	61.549	Dasypus_novemcinctus
ENSXETG00000014637	zc3h13	97	62.448	ENSEASG00005017100	ZC3H13	95	63.550	Equus_asinus_asinus
ENSXETG00000014637	zc3h13	76	86.667	ENSECAG00000022843	ZC3H13	86	77.395	Equus_caballus
ENSXETG00000014637	zc3h13	97	72.943	ENSFALG00000008196	ZC3H13	93	58.048	Ficedula_albicollis
ENSXETG00000014637	zc3h13	97	58.953	ENSFDAG00000012323	ZC3H13	93	59.763	Fukomys_damarensis
ENSXETG00000014637	zc3h13	97	74.616	ENSGALG00000016984	ZC3H13	93	61.392	Gallus_gallus
ENSXETG00000014637	zc3h13	97	46.223	ENSGAFG00000005462	zc3h13	91	42.266	Gambusia_affinis
ENSXETG00000014637	zc3h13	69	66.667	ENSGACG00000015166	zc3h13	82	58.943	Gasterosteus_aculeatus
ENSXETG00000014637	zc3h13	97	47.722	ENSHBUG00000007100	zc3h13	89	58.921	Haplochromis_burtoni
ENSXETG00000014637	zc3h13	54	65.012	ENSHGLG00000006309	ZC3H13	94	61.918	Heterocephalus_glaber_female
ENSXETG00000014637	zc3h13	98	63.573	ENSHGLG00100007460	ZC3H13	100	54.056	Heterocephalus_glaber_male
ENSXETG00000014637	zc3h13	97	60.224	ENSSTOG00000029682	ZC3H13	63	61.507	Ictidomys_tridecemlineatus
ENSXETG00000014637	zc3h13	98	63.599	ENSJJAG00000019971	Zc3h13	93	62.125	Jaculus_jaculus
ENSXETG00000014637	zc3h13	53	68.000	ENSKMAG00000010701	zc3h13	86	68.000	Kryptolebias_marmoratus
ENSXETG00000014637	zc3h13	97	66.900	ENSLACG00000003806	ZC3H13	92	61.872	Latimeria_chalumnae
ENSXETG00000014637	zc3h13	99	64.120	ENSMFAG00000004060	ZC3H13	76	62.483	Macaca_fascicularis
ENSXETG00000014637	zc3h13	99	64.120	ENSMMUG00000017025	ZC3H13	76	62.483	Macaca_mulatta
ENSXETG00000014637	zc3h13	99	64.120	ENSMNEG00000044356	ZC3H13	76	62.483	Macaca_nemestrina
ENSXETG00000014637	zc3h13	79	86.667	ENSMLEG00000039387	ZC3H13	53	58.687	Mandrillus_leucophaeus
ENSXETG00000014637	zc3h13	97	49.936	ENSMAMG00000022274	zc3h13	92	46.946	Mastacembelus_armatus
ENSXETG00000014637	zc3h13	97	48.799	ENSMZEG00005007473	zc3h13	89	58.607	Maylandia_zebra
ENSXETG00000014637	zc3h13	95	63.571	ENSMICG00000014772	ZC3H13	71	60.982	Microcebus_murinus
ENSXETG00000014637	zc3h13	97	70.879	ENSMODG00000014969	ZC3H13	98	60.000	Monodelphis_domestica
ENSXETG00000014637	zc3h13	97	50.635	ENSMALG00000010585	zc3h13	83	50.852	Monopterus_albus
ENSXETG00000014637	zc3h13	79	57.858	MGP_CAROLIEiJ_G0019512	Zc3h13	50	52.018	Mus_caroli
ENSXETG00000014637	zc3h13	79	58.031	ENSMUSG00000022000	Zc3h13	51	52.130	Mus_musculus
ENSXETG00000014637	zc3h13	79	57.732	MGP_PahariEiJ_G0030530	Zc3h13	93	58.098	Mus_pahari
ENSXETG00000014637	zc3h13	79	58.204	MGP_SPRETEiJ_G0020407	Zc3h13	51	52.466	Mus_spretus
ENSXETG00000014637	zc3h13	98	63.116	ENSMPUG00000001602	ZC3H13	97	60.944	Mustela_putorius_furo
ENSXETG00000014637	zc3h13	99	63.798	ENSNLEG00000002498	ZC3H13	76	62.347	Nomascus_leucogenys
ENSXETG00000014637	zc3h13	97	60.420	ENSODEG00000005178	ZC3H13	93	63.014	Octodon_degus
ENSXETG00000014637	zc3h13	97	48.354	ENSONIG00000012236	zc3h13	88	60.000	Oreochromis_niloticus
ENSXETG00000014637	zc3h13	90	61.646	ENSOANG00000015580	ZC3H13	91	63.115	Ornithorhynchus_anatinus
ENSXETG00000014637	zc3h13	97	61.259	ENSOCUG00000015173	ZC3H13	93	62.244	Oryctolagus_cuniculus
ENSXETG00000014637	zc3h13	94	46.719	ENSORLG00000005201	zc3h13	58	49.682	Oryzias_latipes
ENSXETG00000014637	zc3h13	94	46.093	ENSORLG00020016576	zc3h13	55	49.682	Oryzias_latipes_hni
ENSXETG00000014637	zc3h13	56	49.682	ENSORLG00015014966	zc3h13	58	49.682	Oryzias_latipes_hsok
ENSXETG00000014637	zc3h13	94	47.105	ENSOMEG00000007044	zc3h13	90	60.504	Oryzias_melastigma
ENSXETG00000014637	zc3h13	97	61.034	ENSOGAG00000012032	ZC3H13	71	61.149	Otolemur_garnettii
ENSXETG00000014637	zc3h13	98	65.193	ENSOARG00000007790	ZC3H13	93	62.993	Ovis_aries
ENSXETG00000014637	zc3h13	97	60.306	ENSPPAG00000034465	ZC3H13	100	55.482	Pan_paniscus
ENSXETG00000014637	zc3h13	99	63.438	ENSPANG00000014127	ZC3H13	76	61.801	Papio_anubis
ENSXETG00000014637	zc3h13	87	73.323	ENSPSIG00000012518	ZC3H13	96	76.596	Pelodiscus_sinensis
ENSXETG00000014637	zc3h13	65	59.167	ENSPEMG00000021979	-	99	72.066	Peromyscus_maniculatus_bairdii
ENSXETG00000014637	zc3h13	97	72.905	ENSPCIG00000029529	ZC3H13	83	78.544	Phascolarctos_cinereus
ENSXETG00000014637	zc3h13	98	47.468	ENSPFOG00000005039	zc3h13	70	41.750	Poecilia_formosa
ENSXETG00000014637	zc3h13	98	47.342	ENSPLAG00000014095	zc3h13	70	41.875	Poecilia_latipinna
ENSXETG00000014637	zc3h13	98	47.468	ENSPMEG00000006928	zc3h13	92	49.649	Poecilia_mexicana
ENSXETG00000014637	zc3h13	98	47.782	ENSPREG00000010526	zc3h13	72	42.053	Poecilia_reticulata
ENSXETG00000014637	zc3h13	79	78.543	ENSPCAG00000001146	ZC3H13	76	78.543	Procavia_capensis
ENSXETG00000014637	zc3h13	71	88.108	ENSPVAG00000012353	ZC3H13	78	72.316	Pteropus_vampyrus
ENSXETG00000014637	zc3h13	97	49.233	ENSPNYG00000016000	zc3h13	95	46.154	Pundamilia_nyererei
ENSXETG00000014637	zc3h13	97	47.679	ENSPNAG00000011008	zc3h13	54	63.393	Pygocentrus_nattereri
ENSXETG00000014637	zc3h13	79	58.131	ENSRNOG00000011237	Zc3h13	93	58.590	Rattus_norvegicus
ENSXETG00000014637	zc3h13	97	47.475	ENSSMAG00000007110	zc3h13	80	60.494	Scophthalmus_maximus
ENSXETG00000014637	zc3h13	97	47.051	ENSSDUG00000021808	zc3h13	95	54.777	Seriola_dumerili
ENSXETG00000014637	zc3h13	97	60.644	ENSSARG00000007106	ZC3H13	70	71.751	Sorex_araneus
ENSXETG00000014637	zc3h13	97	71.648	ENSSPUG00000013358	ZC3H13	61	73.478	Sphenodon_punctatus
ENSXETG00000014637	zc3h13	53	68.657	ENSSPAG00000019966	zc3h13	86	58.491	Stegastes_partitus
ENSXETG00000014637	zc3h13	97	61.453	ENSSSCG00000009414	ZC3H13	93	63.265	Sus_scrofa
ENSXETG00000014637	zc3h13	74	59.636	ENSTNIG00000014523	zc3h13	80	47.205	Tetraodon_nigroviridis
ENSXETG00000014637	zc3h13	97	61.732	ENSUMAG00000016220	ZC3H13	78	62.721	Ursus_maritimus
ENSXETG00000014637	zc3h13	95	59.514	ENSVPAG00000005179	ZC3H13	84	68.182	Vicugna_pacos
ENSXETG00000014637	zc3h13	97	60.280	ENSVVUG00000028395	ZC3H13	75	60.026	Vulpes_vulpes
ENSXETG00000014637	zc3h13	98	49.683	ENSXMAG00000012423	zc3h13	75	43.054	Xiphophorus_maculatus