EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000014694 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9712 bases
Position: chrGL172732.1:1328614-1338325
Accession: XB-GENE-5751350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059221	RRM_1	PF00076.22	1.6e-30	1	3
ENSXETP00000059221	RRM_1	PF00076.22	1.6e-30	2	3
ENSXETP00000059221	RRM_1	PF00076.22	1.6e-30	3	3
ENSXETP00000032204	RRM_1	PF00076.22	3.8e-21	1	2
ENSXETP00000032204	RRM_1	PF00076.22	3.8e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064342	-	2429	XM_002934414	ENSXETP00000059221	659 (aa)	XP_002934460	F6TWX1
ENSXETT00000032204	-	1317	-	ENSXETP00000032204	439 (aa)	-	F7DVC6

Gene Model

Click here to download ENSXETG00000014694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000014694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000014694	rbm12b	94	30.688	ENSXETG00000013850	grsf1	98	31.746
ENSXETG00000014694	rbm12b	82	38.235	ENSXETG00000023567	hnrnph3	84	34.737
ENSXETG00000014694	rbm12b	99	34.169	ENSXETG00000025920	-	96	34.169
ENSXETG00000014694	rbm12b	95	32.086	ENSXETG00000018321	hnrnph1	78	32.086
ENSXETG00000014694	rbm12b	99	67.000	ENSXETG00000033541	RBM12	91	46.914
ENSXETG00000014694	rbm12b	100	42.152	ENSXETG00000014696	rbm12b	99	34.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000014694	rbm12b	100	46.545	ENSG00000183808	RBM12B	100	82.927	Homo_sapiens
ENSXETG00000014694	rbm12b	97	31.111	ENSAPOG00000008836	zgc:153215	95	31.111	Acanthochromis_polyacanthus
ENSXETG00000014694	rbm12b	99	37.037	ENSAPOG00000013963	rbm12b	100	34.993	Acanthochromis_polyacanthus
ENSXETG00000014694	rbm12b	100	46.201	ENSAMEG00000007134	RBM12B	70	47.082	Ailuropoda_melanoleuca
ENSXETG00000014694	rbm12b	100	38.462	ENSACIG00000014943	rbm12b	97	40.667	Amphilophus_citrinellus
ENSXETG00000014694	rbm12b	99	37.938	ENSAOCG00000024270	rbm12b	100	35.630	Amphiprion_ocellaris
ENSXETG00000014694	rbm12b	73	30.859	ENSAOCG00000010819	zgc:153215	99	31.641	Amphiprion_ocellaris
ENSXETG00000014694	rbm12b	96	38.658	ENSAPEG00000022079	rbm12b	100	38.393	Amphiprion_percula
ENSXETG00000014694	rbm12b	99	48.980	ENSATEG00000001886	zgc:153215	87	48.980	Anabas_testudineus
ENSXETG00000014694	rbm12b	100	39.375	ENSATEG00000004578	rbm12b	97	37.500	Anabas_testudineus
ENSXETG00000014694	rbm12b	100	47.525	ENSAPLG00000002020	RBM12B	100	46.495	Anas_platyrhynchos
ENSXETG00000014694	rbm12b	100	42.387	ENSACAG00000003463	RBM12B	59	42.727	Anolis_carolinensis
ENSXETG00000014694	rbm12b	100	46.640	ENSANAG00000034015	RBM12B	100	47.305	Aotus_nancymaae
ENSXETG00000014694	rbm12b	100	37.630	ENSACLG00000005575	rbm12b	98	34.802	Astatotilapia_calliptera
ENSXETG00000014694	rbm12b	100	39.344	ENSACLG00000005578	rbm12b	100	39.163	Astatotilapia_calliptera
ENSXETG00000014694	rbm12b	96	54.255	ENSAMXG00000020853	zgc:153215	71	54.255	Astyanax_mexicanus
ENSXETG00000014694	rbm12b	100	40.213	ENSAMXG00000041973	rbm12b	100	38.404	Astyanax_mexicanus
ENSXETG00000014694	rbm12b	100	46.201	ENSBTAG00000013408	RBM12B	90	42.905	Bos_taurus
ENSXETG00000014694	rbm12b	100	46.407	ENSCAFG00000009109	RBM12B	69	43.508	Canis_familiaris
ENSXETG00000014694	rbm12b	100	46.407	ENSCAFG00020012203	RBM12B	78	43.729	Canis_lupus_dingo
ENSXETG00000014694	rbm12b	100	46.217	ENSCHIG00000006790	RBM12B	79	42.953	Capra_hircus
ENSXETG00000014694	rbm12b	100	46.217	ENSTSYG00000012515	RBM12B	64	46.693	Carlito_syrichta
ENSXETG00000014694	rbm12b	100	47.639	ENSCAPG00000003543	RBM12B	72	46.845	Cavia_aperea
ENSXETG00000014694	rbm12b	100	47.639	ENSCPOG00000007815	RBM12B	72	46.845	Cavia_porcellus
ENSXETG00000014694	rbm12b	100	46.232	ENSCATG00000030769	RBM12B	77	47.024	Cercocebus_atys
ENSXETG00000014694	rbm12b	100	47.228	ENSCLAG00000017617	RBM12B	67	46.615	Chinchilla_lanigera
ENSXETG00000014694	rbm12b	100	46.545	ENSCSAG00000018559	RBM12B	59	46.825	Chlorocebus_sabaeus
ENSXETG00000014694	rbm12b	100	46.951	ENSCHOG00000008934	RBM12B	69	46.614	Choloepus_hoffmanni
ENSXETG00000014694	rbm12b	100	47.222	ENSCPBG00000003061	RBM12B	100	46.197	Chrysemys_picta_bellii
ENSXETG00000014694	rbm12b	100	45.825	ENSCANG00000030379	RBM12B	75	46.449	Colobus_angolensis_palliatus
ENSXETG00000014694	rbm12b	100	47.143	ENSCGRG00001008710	-	87	44.615	Cricetulus_griseus_chok1gshd
ENSXETG00000014694	rbm12b	100	39.583	ENSCSEG00000004610	rbm12b	97	35.868	Cynoglossus_semilaevis
ENSXETG00000014694	rbm12b	74	30.347	ENSCSEG00000001575	-	99	30.347	Cynoglossus_semilaevis
ENSXETG00000014694	rbm12b	99	37.895	ENSCVAG00000011047	rbm12b	100	34.897	Cyprinodon_variegatus
ENSXETG00000014694	rbm12b	88	45.714	ENSCVAG00000009259	-	99	45.714	Cyprinodon_variegatus
ENSXETG00000014694	rbm12b	100	35.234	ENSDARG00000079717	rbm12b	100	33.241	Danio_rerio
ENSXETG00000014694	rbm12b	93	56.627	ENSDARG00000055889	zgc:153215	79	56.627	Danio_rerio
ENSXETG00000014694	rbm12b	100	46.626	ENSDNOG00000041608	RBM12B	62	46.614	Dasypus_novemcinctus
ENSXETG00000014694	rbm12b	100	46.653	ENSDORG00000024034	-	72	42.347	Dipodomys_ordii
ENSXETG00000014694	rbm12b	100	43.542	ENSETEG00000013005	-	68	42.996	Echinops_telfairi
ENSXETG00000014694	rbm12b	92	31.519	ENSEBUG00000009015	-	71	31.519	Eptatretus_burgeri
ENSXETG00000014694	rbm12b	60	41.892	ENSEBUG00000010930	-	84	30.248	Eptatretus_burgeri
ENSXETG00000014694	rbm12b	100	47.239	ENSEASG00005016297	RBM12B	89	44.237	Equus_asinus_asinus
ENSXETG00000014694	rbm12b	100	47.023	ENSECAG00000017870	RBM12B	78	43.645	Equus_caballus
ENSXETG00000014694	rbm12b	99	46.516	ENSFCAG00000029274	RBM12B	72	47.273	Felis_catus
ENSXETG00000014694	rbm12b	100	43.689	ENSFALG00000014893	RBM12B	100	45.390	Ficedula_albicollis
ENSXETG00000014694	rbm12b	100	47.433	ENSFDAG00000005576	RBM12B	65	46.718	Fukomys_damarensis
ENSXETG00000014694	rbm12b	100	37.214	ENSFHEG00000016425	rbm12b	100	34.993	Fundulus_heteroclitus
ENSXETG00000014694	rbm12b	98	33.562	ENSFHEG00000014539	zgc:153215	96	33.562	Fundulus_heteroclitus
ENSXETG00000014694	rbm12b	100	39.746	ENSGMOG00000013467	rbm12b	99	36.337	Gadus_morhua
ENSXETG00000014694	rbm12b	100	47.140	ENSGALG00000035129	RBM12B	100	45.780	Gallus_gallus
ENSXETG00000014694	rbm12b	94	50.549	ENSGAFG00000007845	zgc:153215	83	50.549	Gambusia_affinis
ENSXETG00000014694	rbm12b	99	39.630	ENSGAFG00000007224	rbm12b	100	36.652	Gambusia_affinis
ENSXETG00000014694	rbm12b	100	39.158	ENSGACG00000008682	rbm12b	100	36.243	Gasterosteus_aculeatus
ENSXETG00000014694	rbm12b	100	47.441	ENSGAGG00000009774	RBM12B	100	46.099	Gopherus_agassizii
ENSXETG00000014694	rbm12b	100	46.951	ENSGGOG00000011909	RBM12B	87	43.384	Gorilla_gorilla
ENSXETG00000014694	rbm12b	100	37.838	ENSHBUG00000016227	rbm12b	100	34.527	Haplochromis_burtoni
ENSXETG00000014694	rbm12b	100	46.721	ENSHGLG00000009063	RBM12B	67	46.139	Heterocephalus_glaber_female
ENSXETG00000014694	rbm12b	100	46.721	ENSHGLG00100021324	RBM12B	67	46.139	Heterocephalus_glaber_male
ENSXETG00000014694	rbm12b	99	36.458	ENSHCOG00000014952	rbm12b	100	33.480	Hippocampus_comes
ENSXETG00000014694	rbm12b	73	30.168	ENSIPUG00000019731	zgc:153215	99	30.168	Ictalurus_punctatus
ENSXETG00000014694	rbm12b	100	39.540	ENSIPUG00000001167	RBM12B	97	37.408	Ictalurus_punctatus
ENSXETG00000014694	rbm12b	100	47.835	ENSSTOG00000027445	RBM12B	84	47.767	Ictidomys_tridecemlineatus
ENSXETG00000014694	rbm12b	100	47.541	ENSJJAG00000004165	-	78	47.495	Jaculus_jaculus
ENSXETG00000014694	rbm12b	100	38.994	ENSKMAG00000013715	rbm12b	99	36.444	Kryptolebias_marmoratus
ENSXETG00000014694	rbm12b	100	39.203	ENSKMAG00000013704	rbm12b	96	36.593	Kryptolebias_marmoratus
ENSXETG00000014694	rbm12b	99	31.533	ENSKMAG00000004958	zgc:153215	99	31.533	Kryptolebias_marmoratus
ENSXETG00000014694	rbm12b	99	30.223	ENSLBEG00000002597	zgc:153215	99	30.375	Labrus_bergylta
ENSXETG00000014694	rbm12b	100	41.586	ENSLACG00000007177	RBM12B	100	42.113	Latimeria_chalumnae
ENSXETG00000014694	rbm12b	100	41.818	ENSLOCG00000018344	rbm12b	100	38.640	Lepisosteus_oculatus
ENSXETG00000014694	rbm12b	100	46.058	ENSLAFG00000029949	RBM12B	74	45.238	Loxodonta_africana
ENSXETG00000014694	rbm12b	100	46.029	ENSMFAG00000045430	RBM12B	77	47.024	Macaca_fascicularis
ENSXETG00000014694	rbm12b	100	46.545	ENSMMUG00000005558	RBM12B	86	43.000	Macaca_mulatta
ENSXETG00000014694	rbm12b	100	46.029	ENSMNEG00000041292	RBM12B	77	47.024	Macaca_nemestrina
ENSXETG00000014694	rbm12b	100	46.029	ENSMLEG00000037288	RBM12B	86	43.833	Mandrillus_leucophaeus
ENSXETG00000014694	rbm12b	96	51.546	ENSMAMG00000012038	zgc:153215	81	51.546	Mastacembelus_armatus
ENSXETG00000014694	rbm12b	100	40.125	ENSMAMG00000011998	rbm12b	100	36.457	Mastacembelus_armatus
ENSXETG00000014694	rbm12b	100	36.646	ENSMZEG00005014845	rbm12b	99	34.661	Maylandia_zebra
ENSXETG00000014694	rbm12b	95	45.055	ENSMZEG00005005435	zgc:153215	79	45.055	Maylandia_zebra
ENSXETG00000014694	rbm12b	100	37.422	ENSMZEG00005015005	rbm12b	100	34.655	Maylandia_zebra
ENSXETG00000014694	rbm12b	100	46.943	ENSMGAG00000011985	RBM12B	98	48.919	Meleagris_gallopavo
ENSXETG00000014694	rbm12b	100	47.648	ENSMAUG00000021752	-	89	45.238	Mesocricetus_auratus
ENSXETG00000014694	rbm12b	100	46.626	ENSMICG00000036969	RBM12B	79	47.495	Microcebus_murinus
ENSXETG00000014694	rbm12b	100	47.746	ENSMOCG00000005603	-	91	44.499	Microtus_ochrogaster
ENSXETG00000014694	rbm12b	98	33.846	ENSMMOG00000003372	zgc:153215	99	33.846	Mola_mola
ENSXETG00000014694	rbm12b	99	39.560	ENSMMOG00000002404	rbm12b	94	33.778	Mola_mola
ENSXETG00000014694	rbm12b	100	45.527	ENSMODG00000007436	RBM12B	98	43.289	Monodelphis_domestica
ENSXETG00000014694	rbm12b	99	31.423	ENSMALG00000001222	zgc:153215	98	32.582	Monopterus_albus
ENSXETG00000014694	rbm12b	99	41.151	ENSMALG00000012059	rbm12b	100	36.270	Monopterus_albus
ENSXETG00000014694	rbm12b	100	46.516	ENSMUSG00000046667	Rbm12b1	100	43.854	Mus_musculus
ENSXETG00000014694	rbm12b	100	46.516	ENSMUSG00000052137	Rbm12b2	75	47.390	Mus_musculus
ENSXETG00000014694	rbm12b	100	46.516	MGP_SPRETEiJ_G0026765	-	68	46.894	Mus_spretus
ENSXETG00000014694	rbm12b	100	46.516	MGP_SPRETEiJ_G0026766	-	86	43.522	Mus_spretus
ENSXETG00000014694	rbm12b	100	46.612	ENSMPUG00000018637	RBM12B	59	47.200	Mustela_putorius_furo
ENSXETG00000014694	rbm12b	100	47.228	ENSMLUG00000002359	RBM12B	66	48.089	Myotis_lucifugus
ENSXETG00000014694	rbm12b	100	48.057	ENSNGAG00000002801	-	64	48.200	Nannospalax_galili
ENSXETG00000014694	rbm12b	100	38.254	ENSNBRG00000015057	rbm12b	100	34.949	Neolamprologus_brichardi
ENSXETG00000014694	rbm12b	100	46.029	ENSNLEG00000032050	RBM12B	75	46.627	Nomascus_leucogenys
ENSXETG00000014694	rbm12b	100	46.843	ENSODEG00000019204	RBM12B	72	46.332	Octodon_degus
ENSXETG00000014694	rbm12b	100	38.254	ENSONIG00000020612	rbm12b	100	35.095	Oreochromis_niloticus
ENSXETG00000014694	rbm12b	99	41.228	ENSONIG00000006054	zgc:153215	88	41.228	Oreochromis_niloticus
ENSXETG00000014694	rbm12b	100	47.295	ENSOANG00000015735	-	97	44.492	Ornithorhynchus_anatinus
ENSXETG00000014694	rbm12b	100	46.914	ENSOCUG00000010353	RBM12B	81	42.479	Oryctolagus_cuniculus
ENSXETG00000014694	rbm12b	99	40.517	ENSORLG00000008228	rbm12b	97	37.425	Oryzias_latipes
ENSXETG00000014694	rbm12b	99	40.302	ENSORLG00020013619	rbm12b	97	36.667	Oryzias_latipes_hni
ENSXETG00000014694	rbm12b	99	40.302	ENSORLG00015019999	rbm12b	97	37.275	Oryzias_latipes_hsok
ENSXETG00000014694	rbm12b	99	40.213	ENSOMEG00000022523	rbm12b	97	36.662	Oryzias_melastigma
ENSXETG00000014694	rbm12b	100	31.011	ENSOMEG00000004220	zgc:153215	96	30.631	Oryzias_melastigma
ENSXETG00000014694	rbm12b	99	48.081	ENSOGAG00000002979	RBM12B	68	48.081	Otolemur_garnettii
ENSXETG00000014694	rbm12b	99	46.311	ENSPTIG00000020071	RBM12B	72	47.273	Panthera_tigris_altaica
ENSXETG00000014694	rbm12b	100	46.748	ENSPTRG00000020420	RBM12B	86	43.384	Pan_troglodytes
ENSXETG00000014694	rbm12b	100	46.029	ENSPANG00000035535	RBM12B	86	43.000	Papio_anubis
ENSXETG00000014694	rbm12b	100	39.673	ENSPKIG00000018719	rbm12b	99	37.794	Paramormyrops_kingsleyae
ENSXETG00000014694	rbm12b	73	30.980	ENSPKIG00000014851	zgc:153215	99	30.980	Paramormyrops_kingsleyae
ENSXETG00000014694	rbm12b	100	47.791	ENSPSIG00000001348	RBM12B	100	45.621	Pelodiscus_sinensis
ENSXETG00000014694	rbm12b	89	38.095	ENSPMGG00000012348	-	100	37.176	Periophthalmus_magnuspinnatus
ENSXETG00000014694	rbm12b	100	47.347	ENSPEMG00000008279	-	87	44.957	Peromyscus_maniculatus_bairdii
ENSXETG00000014694	rbm12b	100	47.316	ENSPCIG00000008556	RBM12B	100	43.421	Phascolarctos_cinereus
ENSXETG00000014694	rbm12b	99	52.381	ENSPFOG00000017451	zgc:153215	66	52.381	Poecilia_formosa
ENSXETG00000014694	rbm12b	99	39.076	ENSPFOG00000020937	rbm12b	97	36.283	Poecilia_formosa
ENSXETG00000014694	rbm12b	99	39.293	ENSPLAG00000018782	rbm12b	100	36.164	Poecilia_latipinna
ENSXETG00000014694	rbm12b	99	39.130	ENSPMEG00000011418	rbm12b	100	36.842	Poecilia_mexicana
ENSXETG00000014694	rbm12b	99	39.293	ENSPREG00000020770	rbm12b	100	36.496	Poecilia_reticulata
ENSXETG00000014694	rbm12b	100	46.232	ENSPPYG00000018745	RBM12B	59	47.024	Pongo_abelii
ENSXETG00000014694	rbm12b	100	46.626	ENSPCOG00000023546	RBM12B	90	43.361	Propithecus_coquereli
ENSXETG00000014694	rbm12b	100	46.735	ENSPVAG00000011803	RBM12B	66	47.782	Pteropus_vampyrus
ENSXETG00000014694	rbm12b	99	30.839	ENSPNYG00000018125	zgc:153215	97	30.839	Pundamilia_nyererei
ENSXETG00000014694	rbm12b	100	37.838	ENSPNYG00000016696	rbm12b	100	34.655	Pundamilia_nyererei
ENSXETG00000014694	rbm12b	93	57.143	ENSPNAG00000025628	zgc:153215	75	57.143	Pygocentrus_nattereri
ENSXETG00000014694	rbm12b	100	39.634	ENSPNAG00000008126	rbm12b	97	35.890	Pygocentrus_nattereri
ENSXETG00000014694	rbm12b	100	46.748	ENSRNOG00000055292	LOC679087	65	46.918	Rattus_norvegicus
ENSXETG00000014694	rbm12b	100	46.748	ENSRNOG00000016330	Rbm12b	80	46.346	Rattus_norvegicus
ENSXETG00000014694	rbm12b	100	46.341	ENSRBIG00000035046	RBM12B	82	42.833	Rhinopithecus_bieti
ENSXETG00000014694	rbm12b	100	45.825	ENSRROG00000023660	RBM12B	75	46.825	Rhinopithecus_roxellana
ENSXETG00000014694	rbm12b	100	46.029	ENSSBOG00000027592	RBM12B	82	43.384	Saimiri_boliviensis_boliviensis
ENSXETG00000014694	rbm12b	100	45.527	ENSSHAG00000015335	RBM12B	100	42.895	Sarcophilus_harrisii
ENSXETG00000014694	rbm12b	99	32.121	ENSSFOG00015009427	zgc:153215	99	32.929	Scleropages_formosus
ENSXETG00000014694	rbm12b	99	39.034	ENSSFOG00015001584	rbm12b	100	36.558	Scleropages_formosus
ENSXETG00000014694	rbm12b	100	39.875	ENSSMAG00000019708	rbm12b	100	36.726	Scophthalmus_maximus
ENSXETG00000014694	rbm12b	100	40.246	ENSSDUG00000006856	rbm12b	100	36.273	Seriola_dumerili
ENSXETG00000014694	rbm12b	99	31.048	ENSSDUG00000012545	zgc:153215	98	31.853	Seriola_dumerili
ENSXETG00000014694	rbm12b	100	40.123	ENSSLDG00000016156	rbm12b	100	36.752	Seriola_lalandi_dorsalis
ENSXETG00000014694	rbm12b	93	54.321	ENSSLDG00000013581	zgc:153215	94	35.025	Seriola_lalandi_dorsalis
ENSXETG00000014694	rbm12b	100	45.567	ENSSARG00000011845	-	70	46.360	Sorex_araneus
ENSXETG00000014694	rbm12b	100	44.942	ENSSPUG00000016954	RBM12B	91	47.573	Sphenodon_punctatus
ENSXETG00000014694	rbm12b	99	37.344	ENSSPAG00000006774	rbm12b	100	35.346	Stegastes_partitus
ENSXETG00000014694	rbm12b	99	33.482	ENSSPAG00000023584	zgc:153215	98	32.366	Stegastes_partitus
ENSXETG00000014694	rbm12b	100	46.612	ENSSSCG00000006110	RBM12B	63	47.000	Sus_scrofa
ENSXETG00000014694	rbm12b	100	47.444	ENSTGUG00000011860	RBM12B	96	48.692	Taeniopygia_guttata
ENSXETG00000014694	rbm12b	100	38.380	ENSTRUG00000013738	rbm12b	100	35.479	Takifugu_rubripes
ENSXETG00000014694	rbm12b	100	45.492	ENSTBEG00000000449	RBM12B	75	42.568	Tupaia_belangeri
ENSXETG00000014694	rbm12b	100	46.217	ENSUAMG00000023639	RBM12B	67	46.813	Ursus_americanus
ENSXETG00000014694	rbm12b	100	46.201	ENSUMAG00000016008	RBM12B	74	43.269	Ursus_maritimus
ENSXETG00000014694	rbm12b	100	46.407	ENSVVUG00000002694	RBM12B	78	43.729	Vulpes_vulpes
ENSXETG00000014694	rbm12b	63	40.924	ENSXCOG00000019735	-	99	41.615	Xiphophorus_couchianus
ENSXETG00000014694	rbm12b	99	30.088	ENSXMAG00000013169	-	97	30.088	Xiphophorus_maculatus
ENSXETG00000014694	rbm12b	99	39.085	ENSXMAG00000014213	rbm12b	100	36.735	Xiphophorus_maculatus