EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000014696 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: -
Full Name: Xenopus tropicalis RNA binding motif protein 12B (rbm12b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 3749 bases
Position: chrGL172732.1:1320891-1324639
Accession: NM_001045717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000032207	RRM_1	PF00076.22	1.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000032207	-	2610	-	ENSXETP00000032207	645 (aa)	-	F7DVC0

Gene Model

Click here to download ENSXETG00000014696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000014696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000014696	rbm12b	99	34.827	ENSXETG00000014694	rbm12b	100	42.152
ENSXETG00000014696	rbm12b	69	32.962	ENSXETG00000025920	-	99	33.185
ENSXETG00000014696	rbm12b	80	50.000	ENSXETG00000033541	RBM12	57	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000014696	rbm12b	90	38.490	ENSG00000183808	RBM12B	99	59.259	Homo_sapiens
ENSXETG00000014696	rbm12b	93	40.230	ENSAMEG00000007134	RBM12B	76	43.836	Ailuropoda_melanoleuca
ENSXETG00000014696	rbm12b	68	36.054	ENSACIG00000014943	rbm12b	96	36.054	Amphilophus_citrinellus
ENSXETG00000014696	rbm12b	68	32.051	ENSAOCG00000024270	rbm12b	76	31.276	Amphiprion_ocellaris
ENSXETG00000014696	rbm12b	67	30.237	ENSAOCG00000010819	zgc:153215	99	30.040	Amphiprion_ocellaris
ENSXETG00000014696	rbm12b	67	34.685	ENSAPEG00000022079	rbm12b	99	35.333	Amphiprion_percula
ENSXETG00000014696	rbm12b	96	34.314	ENSATEG00000004578	rbm12b	78	34.314	Anabas_testudineus
ENSXETG00000014696	rbm12b	69	30.194	ENSATEG00000001886	zgc:153215	100	30.194	Anabas_testudineus
ENSXETG00000014696	rbm12b	99	32.094	ENSAPLG00000002020	RBM12B	73	37.451	Anas_platyrhynchos
ENSXETG00000014696	rbm12b	87	36.047	ENSACAG00000003463	RBM12B	61	38.356	Anolis_carolinensis
ENSXETG00000014696	rbm12b	85	39.080	ENSANAG00000034015	RBM12B	69	42.466	Aotus_nancymaae
ENSXETG00000014696	rbm12b	80	31.732	ENSACLG00000005575	rbm12b	88	31.732	Astatotilapia_calliptera
ENSXETG00000014696	rbm12b	75	34.211	ENSACLG00000005578	rbm12b	72	34.211	Astatotilapia_calliptera
ENSXETG00000014696	rbm12b	80	36.250	ENSAMXG00000041973	rbm12b	86	39.437	Astyanax_mexicanus
ENSXETG00000014696	rbm12b	68	50.000	ENSAMXG00000020853	zgc:153215	68	50.000	Astyanax_mexicanus
ENSXETG00000014696	rbm12b	84	38.614	ENSBTAG00000013408	RBM12B	67	38.431	Bos_taurus
ENSXETG00000014696	rbm12b	88	39.080	ENSCAFG00000009109	RBM12B	57	42.466	Canis_familiaris
ENSXETG00000014696	rbm12b	88	39.080	ENSCAFG00020012203	RBM12B	69	42.466	Canis_lupus_dingo
ENSXETG00000014696	rbm12b	69	37.298	ENSCHIG00000006790	RBM12B	70	37.298	Capra_hircus
ENSXETG00000014696	rbm12b	88	39.080	ENSTSYG00000012515	RBM12B	62	42.466	Carlito_syrichta
ENSXETG00000014696	rbm12b	88	40.230	ENSCAPG00000003543	RBM12B	64	42.466	Cavia_aperea
ENSXETG00000014696	rbm12b	88	40.230	ENSCPOG00000007815	RBM12B	64	42.466	Cavia_porcellus
ENSXETG00000014696	rbm12b	90	38.306	ENSCATG00000030769	RBM12B	71	42.466	Cercocebus_atys
ENSXETG00000014696	rbm12b	88	40.230	ENSCLAG00000017617	RBM12B	64	42.466	Chinchilla_lanigera
ENSXETG00000014696	rbm12b	90	38.490	ENSCSAG00000018559	RBM12B	61	42.466	Chlorocebus_sabaeus
ENSXETG00000014696	rbm12b	69	38.800	ENSCHOG00000008934	RBM12B	52	38.800	Choloepus_hoffmanni
ENSXETG00000014696	rbm12b	99	33.333	ENSCPBG00000003061	RBM12B	100	32.918	Chrysemys_picta_bellii
ENSXETG00000014696	rbm12b	90	38.026	ENSCANG00000030379	RBM12B	70	42.466	Colobus_angolensis_palliatus
ENSXETG00000014696	rbm12b	77	37.545	ENSCGRG00001008710	-	63	37.545	Cricetulus_griseus_chok1gshd
ENSXETG00000014696	rbm12b	99	31.831	ENSCSEG00000004610	rbm12b	97	32.070	Cynoglossus_semilaevis
ENSXETG00000014696	rbm12b	67	37.634	ENSCVAG00000009259	-	99	37.634	Cyprinodon_variegatus
ENSXETG00000014696	rbm12b	67	34.468	ENSCVAG00000011047	rbm12b	97	34.534	Cyprinodon_variegatus
ENSXETG00000014696	rbm12b	67	54.878	ENSDARG00000055889	zgc:153215	84	54.878	Danio_rerio
ENSXETG00000014696	rbm12b	68	35.714	ENSDARG00000079717	rbm12b	70	36.735	Danio_rerio
ENSXETG00000014696	rbm12b	90	36.697	ENSDNOG00000041608	RBM12B	60	39.726	Dasypus_novemcinctus
ENSXETG00000014696	rbm12b	82	38.492	ENSDORG00000024034	-	61	39.726	Dipodomys_ordii
ENSXETG00000014696	rbm12b	68	38.947	ENSETEG00000013005	-	65	38.947	Echinops_telfairi
ENSXETG00000014696	rbm12b	95	37.684	ENSEASG00005016297	RBM12B	69	43.836	Equus_asinus_asinus
ENSXETG00000014696	rbm12b	90	38.614	ENSECAG00000017870	RBM12B	62	43.836	Equus_caballus
ENSXETG00000014696	rbm12b	88	36.782	ENSFCAG00000029274	RBM12B	70	41.096	Felis_catus
ENSXETG00000014696	rbm12b	100	31.456	ENSFALG00000014893	RBM12B	73	35.547	Ficedula_albicollis
ENSXETG00000014696	rbm12b	88	40.230	ENSFDAG00000005576	RBM12B	62	42.466	Fukomys_damarensis
ENSXETG00000014696	rbm12b	67	36.461	ENSFHEG00000016425	rbm12b	73	36.461	Fundulus_heteroclitus
ENSXETG00000014696	rbm12b	99	32.174	ENSGMOG00000013467	rbm12b	100	32.174	Gadus_morhua
ENSXETG00000014696	rbm12b	99	31.868	ENSGALG00000035129	RBM12B	100	31.868	Gallus_gallus
ENSXETG00000014696	rbm12b	67	33.049	ENSGAFG00000007224	rbm12b	73	34.115	Gambusia_affinis
ENSXETG00000014696	rbm12b	70	33.951	ENSGACG00000008682	rbm12b	75	33.951	Gasterosteus_aculeatus
ENSXETG00000014696	rbm12b	99	32.276	ENSGAGG00000009774	RBM12B	100	32.600	Gopherus_agassizii
ENSXETG00000014696	rbm12b	90	38.674	ENSGGOG00000011909	RBM12B	69	42.466	Gorilla_gorilla
ENSXETG00000014696	rbm12b	99	30.813	ENSHBUG00000016227	rbm12b	73	34.298	Haplochromis_burtoni
ENSXETG00000014696	rbm12b	63	39.535	ENSHBUG00000016150	zgc:153215	78	39.535	Haplochromis_burtoni
ENSXETG00000014696	rbm12b	88	40.230	ENSHGLG00000009063	RBM12B	63	42.466	Heterocephalus_glaber_female
ENSXETG00000014696	rbm12b	88	40.230	ENSHGLG00100021324	RBM12B	63	42.466	Heterocephalus_glaber_male
ENSXETG00000014696	rbm12b	99	35.060	ENSIPUG00000001167	RBM12B	85	40.845	Ictalurus_punctatus
ENSXETG00000014696	rbm12b	67	50.617	ENSIPUG00000019731	zgc:153215	77	50.617	Ictalurus_punctatus
ENSXETG00000014696	rbm12b	88	42.308	ENSSTOG00000027445	RBM12B	74	42.466	Ictidomys_tridecemlineatus
ENSXETG00000014696	rbm12b	90	39.080	ENSJJAG00000004165	-	70	42.466	Jaculus_jaculus
ENSXETG00000014696	rbm12b	67	32.609	ENSKMAG00000004958	zgc:153215	99	32.609	Kryptolebias_marmoratus
ENSXETG00000014696	rbm12b	83	52.222	ENSLACG00000007177	RBM12B	87	52.222	Latimeria_chalumnae
ENSXETG00000014696	rbm12b	99	32.390	ENSLOCG00000018344	rbm12b	100	32.390	Lepisosteus_oculatus
ENSXETG00000014696	rbm12b	93	41.379	ENSLAFG00000029949	RBM12B	77	45.205	Loxodonta_africana
ENSXETG00000014696	rbm12b	90	38.490	ENSMFAG00000045430	RBM12B	70	42.466	Macaca_fascicularis
ENSXETG00000014696	rbm12b	90	38.490	ENSMMUG00000005558	RBM12B	69	42.466	Macaca_mulatta
ENSXETG00000014696	rbm12b	90	38.490	ENSMNEG00000041292	RBM12B	70	42.466	Macaca_nemestrina
ENSXETG00000014696	rbm12b	90	38.306	ENSMLEG00000037288	RBM12B	69	42.466	Mandrillus_leucophaeus
ENSXETG00000014696	rbm12b	67	46.512	ENSMAMG00000012038	zgc:153215	80	46.512	Mastacembelus_armatus
ENSXETG00000014696	rbm12b	99	36.364	ENSMAMG00000011998	rbm12b	78	35.503	Mastacembelus_armatus
ENSXETG00000014696	rbm12b	63	39.535	ENSMZEG00005005435	zgc:153215	78	39.535	Maylandia_zebra
ENSXETG00000014696	rbm12b	80	31.561	ENSMZEG00005015005	rbm12b	91	31.561	Maylandia_zebra
ENSXETG00000014696	rbm12b	75	30.224	ENSMZEG00005014845	rbm12b	82	30.224	Maylandia_zebra
ENSXETG00000014696	rbm12b	68	35.283	ENSMGAG00000011985	RBM12B	99	35.283	Meleagris_gallopavo
ENSXETG00000014696	rbm12b	75	36.364	ENSMAUG00000021752	-	64	36.364	Mesocricetus_auratus
ENSXETG00000014696	rbm12b	88	39.080	ENSMICG00000036969	RBM12B	72	42.466	Microcebus_murinus
ENSXETG00000014696	rbm12b	68	37.500	ENSMOCG00000005603	-	58	37.295	Microtus_ochrogaster
ENSXETG00000014696	rbm12b	79	32.342	ENSMMOG00000002404	rbm12b	83	32.342	Mola_mola
ENSXETG00000014696	rbm12b	83	39.155	ENSMODG00000007436	RBM12B	67	39.539	Monodelphis_domestica
ENSXETG00000014696	rbm12b	99	32.174	ENSMALG00000012059	rbm12b	75	35.983	Monopterus_albus
ENSXETG00000014696	rbm12b	68	32.128	ENSMALG00000001222	zgc:153215	99	32.128	Monopterus_albus
ENSXETG00000014696	rbm12b	84	41.414	ENSMUSG00000046667	Rbm12b1	70	45.205	Mus_musculus
ENSXETG00000014696	rbm12b	81	40.476	ENSMUSG00000052137	Rbm12b2	70	41.892	Mus_musculus
ENSXETG00000014696	rbm12b	80	42.667	MGP_SPRETEiJ_G0026765	-	64	41.892	Mus_spretus
ENSXETG00000014696	rbm12b	80	42.667	MGP_SPRETEiJ_G0026766	-	70	41.892	Mus_spretus
ENSXETG00000014696	rbm12b	88	39.080	ENSMPUG00000018637	RBM12B	61	42.466	Mustela_putorius_furo
ENSXETG00000014696	rbm12b	91	37.569	ENSMLUG00000002359	RBM12B	64	41.096	Myotis_lucifugus
ENSXETG00000014696	rbm12b	88	38.376	ENSNGAG00000002801	-	66	39.726	Nannospalax_galili
ENSXETG00000014696	rbm12b	63	39.535	ENSNBRG00000013644	zgc:153215	78	39.535	Neolamprologus_brichardi
ENSXETG00000014696	rbm12b	74	33.208	ENSNBRG00000015057	rbm12b	82	33.208	Neolamprologus_brichardi
ENSXETG00000014696	rbm12b	90	38.306	ENSNLEG00000032050	RBM12B	69	42.466	Nomascus_leucogenys
ENSXETG00000014696	rbm12b	81	40.230	ENSODEG00000019204	RBM12B	59	42.466	Octodon_degus
ENSXETG00000014696	rbm12b	74	33.522	ENSONIG00000020612	rbm12b	100	30.670	Oreochromis_niloticus
ENSXETG00000014696	rbm12b	67	39.535	ENSONIG00000006054	zgc:153215	92	39.535	Oreochromis_niloticus
ENSXETG00000014696	rbm12b	99	33.333	ENSOANG00000015735	-	97	34.110	Ornithorhynchus_anatinus
ENSXETG00000014696	rbm12b	87	39.080	ENSOCUG00000010353	RBM12B	69	42.466	Oryctolagus_cuniculus
ENSXETG00000014696	rbm12b	70	34.096	ENSORLG00000008228	rbm12b	75	33.881	Oryzias_latipes
ENSXETG00000014696	rbm12b	99	30.325	ENSORLG00020013619	rbm12b	75	33.676	Oryzias_latipes_hni
ENSXETG00000014696	rbm12b	70	33.888	ENSORLG00015019999	rbm12b	75	33.676	Oryzias_latipes_hsok
ENSXETG00000014696	rbm12b	99	30.612	ENSOMEG00000022523	rbm12b	75	33.936	Oryzias_melastigma
ENSXETG00000014696	rbm12b	68	31.674	ENSOMEG00000004220	zgc:153215	96	31.674	Oryzias_melastigma
ENSXETG00000014696	rbm12b	87	40.476	ENSOGAG00000002979	RBM12B	62	43.836	Otolemur_garnettii
ENSXETG00000014696	rbm12b	88	36.782	ENSPTIG00000020071	RBM12B	70	41.096	Panthera_tigris_altaica
ENSXETG00000014696	rbm12b	88	39.080	ENSPTRG00000020420	RBM12B	69	42.466	Pan_troglodytes
ENSXETG00000014696	rbm12b	90	38.490	ENSPANG00000035535	RBM12B	69	42.466	Papio_anubis
ENSXETG00000014696	rbm12b	68	35.497	ENSPKIG00000018719	rbm12b	74	35.497	Paramormyrops_kingsleyae
ENSXETG00000014696	rbm12b	68	30.699	ENSPKIG00000014851	zgc:153215	99	30.699	Paramormyrops_kingsleyae
ENSXETG00000014696	rbm12b	99	34.685	ENSPSIG00000001348	RBM12B	75	38.536	Pelodiscus_sinensis
ENSXETG00000014696	rbm12b	60	33.227	ENSPMGG00000012348	-	94	32.588	Periophthalmus_magnuspinnatus
ENSXETG00000014696	rbm12b	77	37.230	ENSPEMG00000008279	-	65	37.230	Peromyscus_maniculatus_bairdii
ENSXETG00000014696	rbm12b	83	39.080	ENSPCIG00000008556	RBM12B	69	39.155	Phascolarctos_cinereus
ENSXETG00000014696	rbm12b	68	48.936	ENSPFOG00000017451	zgc:153215	68	48.936	Poecilia_formosa
ENSXETG00000014696	rbm12b	67	33.406	ENSPFOG00000020937	rbm12b	93	33.623	Poecilia_formosa
ENSXETG00000014696	rbm12b	67	33.547	ENSPLAG00000018782	rbm12b	97	33.761	Poecilia_latipinna
ENSXETG00000014696	rbm12b	68	30.323	ENSPMEG00000016662	zgc:153215	100	30.323	Poecilia_mexicana
ENSXETG00000014696	rbm12b	67	33.547	ENSPMEG00000011418	rbm12b	97	33.761	Poecilia_mexicana
ENSXETG00000014696	rbm12b	68	30.315	ENSPREG00000018608	zgc:153215	100	30.315	Poecilia_reticulata
ENSXETG00000014696	rbm12b	69	33.333	ENSPREG00000020770	rbm12b	75	33.542	Poecilia_reticulata
ENSXETG00000014696	rbm12b	90	38.490	ENSPPYG00000018745	RBM12B	61	42.466	Pongo_abelii
ENSXETG00000014696	rbm12b	88	40.230	ENSPCOG00000023546	RBM12B	70	43.836	Propithecus_coquereli
ENSXETG00000014696	rbm12b	90	37.624	ENSPVAG00000011803	RBM12B	65	42.466	Pteropus_vampyrus
ENSXETG00000014696	rbm12b	70	34.350	ENSPNYG00000016696	rbm12b	76	34.350	Pundamilia_nyererei
ENSXETG00000014696	rbm12b	82	36.523	ENSPNAG00000008126	rbm12b	86	38.028	Pygocentrus_nattereri
ENSXETG00000014696	rbm12b	68	48.810	ENSPNAG00000025628	zgc:153215	76	48.810	Pygocentrus_nattereri
ENSXETG00000014696	rbm12b	69	37.952	ENSRNOG00000055292	LOC679087	66	37.952	Rattus_norvegicus
ENSXETG00000014696	rbm12b	82	40.698	ENSRNOG00000016330	Rbm12b	67	41.892	Rattus_norvegicus
ENSXETG00000014696	rbm12b	90	38.122	ENSRBIG00000035046	RBM12B	69	42.466	Rhinopithecus_bieti
ENSXETG00000014696	rbm12b	92	37.624	ENSRROG00000023660	RBM12B	74	42.466	Rhinopithecus_roxellana
ENSXETG00000014696	rbm12b	88	39.080	ENSSBOG00000027592	RBM12B	69	42.466	Saimiri_boliviensis_boliviensis
ENSXETG00000014696	rbm12b	83	39.080	ENSSHAG00000015335	RBM12B	69	39.539	Sarcophilus_harrisii
ENSXETG00000014696	rbm12b	99	31.453	ENSSFOG00015001584	rbm12b	77	34.542	Scleropages_formosus
ENSXETG00000014696	rbm12b	67	31.493	ENSSFOG00015009427	zgc:153215	99	31.493	Scleropages_formosus
ENSXETG00000014696	rbm12b	99	30.233	ENSSMAG00000019708	rbm12b	100	30.568	Scophthalmus_maximus
ENSXETG00000014696	rbm12b	69	31.174	ENSSMAG00000019013	zgc:153215	98	31.174	Scophthalmus_maximus
ENSXETG00000014696	rbm12b	75	33.212	ENSSDUG00000006856	rbm12b	83	33.212	Seriola_dumerili
ENSXETG00000014696	rbm12b	75	32.364	ENSSLDG00000016156	rbm12b	83	32.364	Seriola_lalandi_dorsalis
ENSXETG00000014696	rbm12b	67	47.500	ENSSLDG00000013581	zgc:153215	77	45.349	Seriola_lalandi_dorsalis
ENSXETG00000014696	rbm12b	75	35.455	ENSSARG00000011845	-	73	35.455	Sorex_araneus
ENSXETG00000014696	rbm12b	68	37.037	ENSSPUG00000016954	RBM12B	91	37.549	Sphenodon_punctatus
ENSXETG00000014696	rbm12b	67	31.818	ENSSPAG00000023584	zgc:153215	98	30.979	Stegastes_partitus
ENSXETG00000014696	rbm12b	90	39.806	ENSSSCG00000006110	RBM12B	62	43.836	Sus_scrofa
ENSXETG00000014696	rbm12b	69	36.290	ENSTGUG00000011860	RBM12B	96	36.290	Taeniopygia_guttata
ENSXETG00000014696	rbm12b	71	33.800	ENSTRUG00000013738	rbm12b	77	34.433	Takifugu_rubripes
ENSXETG00000014696	rbm12b	70	39.364	ENSTBEG00000000449	RBM12B	65	39.364	Tupaia_belangeri
ENSXETG00000014696	rbm12b	93	39.080	ENSUAMG00000023639	RBM12B	73	42.466	Ursus_americanus
ENSXETG00000014696	rbm12b	88	39.080	ENSUMAG00000016008	RBM12B	66	42.466	Ursus_maritimus
ENSXETG00000014696	rbm12b	82	39.080	ENSVVUG00000002694	RBM12B	65	42.466	Vulpes_vulpes
ENSXETG00000014696	rbm12b	60	34.641	ENSXCOG00000019735	-	99	34.641	Xiphophorus_couchianus
ENSXETG00000014696	rbm12b	67	30.201	ENSXMAG00000013169	-	96	30.201	Xiphophorus_maculatus
ENSXETG00000014696	rbm12b	67	33.902	ENSXMAG00000014213	rbm12b	97	33.902	Xiphophorus_maculatus