EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000015985 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Xenopus tropicalis uncharacterized loc100216173 (LOC100216173)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 11638 bases
Position: chrGL173263.1:104627-116264
Accession: NM_001142142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000034884	Methyltransf_31	PF13847.6	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063027	-	2287	XM_018096177	ENSXETP00000060221	169 (aa)	XP_017951666	B5DDW9
ENSXETT00000034884	-	836	-	ENSXETP00000034884	249 (aa)	-	F6XHA2

Gene Model

Click here to download ENSXETG00000015985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000015985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000015985	-	90	70.667	ENSXETG00000017500	pcmt1	98	74.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000015985	-	90	70.222	ENSAPOG00000013007	pcmt	83	70.222	Acanthochromis_polyacanthus
ENSXETG00000015985	-	90	71.556	ENSACIG00000023767	pcmt	84	71.556	Amphilophus_citrinellus
ENSXETG00000015985	-	90	72.768	ENSACIG00000024027	pcmtl	99	72.768	Amphilophus_citrinellus
ENSXETG00000015985	-	90	70.222	ENSAOCG00000002467	pcmt	83	70.222	Amphiprion_ocellaris
ENSXETG00000015985	-	90	70.222	ENSAPEG00000005991	pcmt	84	70.222	Amphiprion_percula
ENSXETG00000015985	-	90	69.778	ENSATEG00000020772	pcmt	99	69.778	Anabas_testudineus
ENSXETG00000015985	-	92	74.783	ENSAPLG00000004765	-	100	74.783	Anas_platyrhynchos
ENSXETG00000015985	-	90	67.265	ENSAPLG00000009762	PCMT1	98	67.265	Anas_platyrhynchos
ENSXETG00000015985	-	90	77.778	ENSACAG00000013901	-	98	77.778	Anolis_carolinensis
ENSXETG00000015985	-	90	69.333	ENSACAG00000006734	PCMT1	99	69.333	Anolis_carolinensis
ENSXETG00000015985	-	90	70.667	ENSACLG00000027300	pcmt	99	67.556	Astatotilapia_calliptera
ENSXETG00000015985	-	90	70.222	ENSAMXG00000036038	pcmt	99	66.518	Astyanax_mexicanus
ENSXETG00000015985	-	100	68.273	ENSAMXG00000033948	pcmtl	100	68.273	Astyanax_mexicanus
ENSXETG00000015985	-	93	67.532	ENSBTAG00000010204	PCMT1	80	71.512	Bos_taurus
ENSXETG00000015985	-	90	51.556	WBGene00003954	pcm-1	99	51.556	Caenorhabditis_elegans
ENSXETG00000015985	-	93	67.532	ENSCHIG00000025710	PCMT1	98	67.136	Capra_hircus
ENSXETG00000015985	-	90	59.556	ENSCHOG00000009436	PCMT1	99	59.556	Choloepus_hoffmanni
ENSXETG00000015985	-	99	74.797	ENSCPBG00000013417	-	99	74.797	Chrysemys_picta_bellii
ENSXETG00000015985	-	91	69.912	ENSCPBG00000016587	PCMT1	79	69.912	Chrysemys_picta_bellii
ENSXETG00000015985	-	90	68.444	ENSCSEG00000003382	pcmt	81	68.444	Cynoglossus_semilaevis
ENSXETG00000015985	-	90	71.111	ENSCVAG00000021517	pcmt	83	71.111	Cyprinodon_variegatus
ENSXETG00000015985	-	98	69.796	ENSCVAG00000010875	pcmtl	98	69.796	Cyprinodon_variegatus
ENSXETG00000015985	-	90	70.222	ENSDARG00000015201	pcmt	98	70.222	Danio_rerio
ENSXETG00000015985	-	98	68.571	ENSDARG00000042848	pcmtl	99	68.571	Danio_rerio
ENSXETG00000015985	-	78	71.649	ENSDORG00000003137	Pcmt1	99	71.649	Dipodomys_ordii
ENSXETG00000015985	-	78	72.165	ENSEBUG00000000561	PCMT1	99	72.165	Eptatretus_burgeri
ENSXETG00000015985	-	93	70.130	ENSEASG00005008914	-	81	70.130	Equus_asinus_asinus
ENSXETG00000015985	-	94	69.231	ENSECAG00000005292	PCMT1	80	70.130	Equus_caballus
ENSXETG00000015985	-	90	68.444	ENSEEUG00000015095	PCMT1	99	68.444	Erinaceus_europaeus
ENSXETG00000015985	-	90	70.667	ENSELUG00000019001	pcmt	84	70.667	Esox_lucius
ENSXETG00000015985	-	100	68.273	ENSELUG00000016823	pcmtl	100	68.273	Esox_lucius
ENSXETG00000015985	-	78	72.680	ENSFALG00000012172	PCMT1	99	72.680	Ficedula_albicollis
ENSXETG00000015985	-	94	77.253	ENSFALG00000001118	-	94	77.253	Ficedula_albicollis
ENSXETG00000015985	-	90	69.778	ENSFHEG00000016480	pcmt	84	69.778	Fundulus_heteroclitus
ENSXETG00000015985	-	90	70.222	ENSGMOG00000017692	pcmt	99	70.222	Gadus_morhua
ENSXETG00000015985	-	90	69.778	ENSGALG00000012388	PCMT1	99	69.778	Gallus_gallus
ENSXETG00000015985	-	95	77.542	ENSGALG00000032988	PCMT1L	95	78.112	Gallus_gallus
ENSXETG00000015985	-	90	70.222	ENSGAFG00000004794	pcmt	83	70.222	Gambusia_affinis
ENSXETG00000015985	-	93	71.552	ENSGAFG00000003376	pcmtl	98	71.552	Gambusia_affinis
ENSXETG00000015985	-	99	75.203	ENSGAGG00000013101	-	99	75.203	Gopherus_agassizii
ENSXETG00000015985	-	90	69.778	ENSGAGG00000020154	PCMT1	99	69.778	Gopherus_agassizii
ENSXETG00000015985	-	90	71.111	ENSHBUG00000010762	pcmt	99	68.000	Haplochromis_burtoni
ENSXETG00000015985	-	90	69.778	ENSHCOG00000010431	pcmt	84	69.778	Hippocampus_comes
ENSXETG00000015985	-	90	70.667	ENSIPUG00000009756	pcmt1	84	70.667	Ictalurus_punctatus
ENSXETG00000015985	-	100	65.863	ENSIPUG00000020977	pimt	100	65.863	Ictalurus_punctatus
ENSXETG00000015985	-	90	68.000	ENSJJAG00000023560	Pcmt1	99	68.000	Jaculus_jaculus
ENSXETG00000015985	-	100	65.863	ENSKMAG00000006639	pcmtl	100	65.863	Kryptolebias_marmoratus
ENSXETG00000015985	-	90	70.222	ENSKMAG00000022208	pcmt	83	70.222	Kryptolebias_marmoratus
ENSXETG00000015985	-	90	70.222	ENSLBEG00000017170	pcmt	83	70.222	Labrus_bergylta
ENSXETG00000015985	-	92	67.382	ENSLACG00000006397	PCMT1	95	67.130	Latimeria_chalumnae
ENSXETG00000015985	-	92	69.528	ENSLOCG00000017009	pcmt	93	70.667	Lepisosteus_oculatus
ENSXETG00000015985	-	90	68.889	ENSLAFG00000012417	PCMT1	99	68.889	Loxodonta_africana
ENSXETG00000015985	-	90	70.222	ENSMAMG00000000917	pcmt	83	70.222	Mastacembelus_armatus
ENSXETG00000015985	-	90	70.667	ENSMZEG00005004971	pcmt	99	67.556	Maylandia_zebra
ENSXETG00000015985	-	87	68.664	ENSMGAG00000012636	PCMT1	99	71.014	Meleagris_gallopavo
ENSXETG00000015985	-	90	79.111	ENSMGAG00000003062	-	99	79.111	Meleagris_gallopavo
ENSXETG00000015985	-	90	70.089	ENSMMOG00000012018	pcmtl	93	70.089	Mola_mola
ENSXETG00000015985	-	87	69.585	ENSMMOG00000015402	pcmt	85	69.585	Mola_mola
ENSXETG00000015985	-	90	70.667	ENSMALG00000020956	pcmt	99	70.667	Monopterus_albus
ENSXETG00000015985	-	90	71.111	ENSNBRG00000003034	pcmt	99	71.111	Neolamprologus_brichardi
ENSXETG00000015985	-	90	71.111	ENSONIG00000005572	pcmt	83	71.111	Oreochromis_niloticus
ENSXETG00000015985	-	91	69.469	ENSOANG00000001066	PCMT1	81	69.469	Ornithorhynchus_anatinus
ENSXETG00000015985	-	90	70.222	ENSORLG00000017625	pcmt	84	70.222	Oryzias_latipes
ENSXETG00000015985	-	90	70.222	ENSORLG00020018295	pcmt	84	70.222	Oryzias_latipes_hni
ENSXETG00000015985	-	90	70.222	ENSORLG00015016675	pcmt	84	70.222	Oryzias_latipes_hsok
ENSXETG00000015985	-	90	69.778	ENSOMEG00000021999	pcmt	83	69.778	Oryzias_melastigma
ENSXETG00000015985	-	84	68.421	ENSOARG00000002890	PCMT1	99	68.421	Ovis_aries
ENSXETG00000015985	-	100	67.470	ENSPKIG00000022992	pcmtl	100	67.470	Paramormyrops_kingsleyae
ENSXETG00000015985	-	78	71.649	ENSPSIG00000017327	PCMT1	99	71.649	Pelodiscus_sinensis
ENSXETG00000015985	-	96	75.417	ENSPSIG00000012438	-	99	75.417	Pelodiscus_sinensis
ENSXETG00000015985	-	90	61.333	ENSPMGG00000013455	pcmt	82	61.333	Periophthalmus_magnuspinnatus
ENSXETG00000015985	-	90	70.667	ENSPFOG00000015367	pcmt	83	70.667	Poecilia_formosa
ENSXETG00000015985	-	90	70.667	ENSPLAG00000004032	pcmt	99	67.556	Poecilia_latipinna
ENSXETG00000015985	-	90	70.667	ENSPMEG00000010356	pcmt	83	70.667	Poecilia_mexicana
ENSXETG00000015985	-	90	66.667	ENSPREG00000015965	pcmt	99	66.667	Poecilia_reticulata
ENSXETG00000015985	-	98	68.571	ENSPREG00000016451	pcmtl	99	68.571	Poecilia_reticulata
ENSXETG00000015985	-	90	45.778	ENSPCAG00000003359	PCMT1	99	45.778	Procavia_capensis
ENSXETG00000015985	-	90	70.667	ENSPNYG00000000882	pcmt	99	67.556	Pundamilia_nyererei
ENSXETG00000015985	-	100	67.871	ENSPNAG00000005412	pcmtl	100	67.871	Pygocentrus_nattereri
ENSXETG00000015985	-	90	69.778	ENSPNAG00000002676	pcmt	84	69.778	Pygocentrus_nattereri
ENSXETG00000015985	-	65	72.671	ENSSHAG00000017541	PCMT1	99	72.671	Sarcophilus_harrisii
ENSXETG00000015985	-	90	69.778	ENSSFOG00015020607	pcmt1	99	69.778	Scleropages_formosus
ENSXETG00000015985	-	90	69.778	ENSSMAG00000003401	pcmt	83	69.778	Scophthalmus_maximus
ENSXETG00000015985	-	90	69.778	ENSSDUG00000007397	pcmt	83	69.778	Seriola_dumerili
ENSXETG00000015985	-	90	69.778	ENSSLDG00000020446	pcmt	83	69.778	Seriola_lalandi_dorsalis
ENSXETG00000015985	-	65	75.776	ENSSLDG00000011313	-	96	75.776	Seriola_lalandi_dorsalis
ENSXETG00000015985	-	90	69.333	ENSSPUG00000005816	PCMT1	99	69.333	Sphenodon_punctatus
ENSXETG00000015985	-	90	70.222	ENSSPAG00000016434	pcmt	84	70.222	Stegastes_partitus
ENSXETG00000015985	-	93	67.965	ENSSSCG00000004103	PCMT1	81	67.965	Sus_scrofa
ENSXETG00000015985	-	90	78.667	ENSTGUG00000007336	-	100	78.667	Taeniopygia_guttata
ENSXETG00000015985	-	78	72.680	ENSTGUG00000011332	PCMT1	100	72.680	Taeniopygia_guttata
ENSXETG00000015985	-	98	64.898	ENSTRUG00000025102	pcmtl	98	64.898	Takifugu_rubripes
ENSXETG00000015985	-	90	69.163	ENSTNIG00000019127	pcmt	99	69.163	Tetraodon_nigroviridis
ENSXETG00000015985	-	98	67.755	ENSXCOG00000007525	pcmtl	99	67.755	Xiphophorus_couchianus
ENSXETG00000015985	-	90	67.111	ENSXCOG00000018495	pcmt	99	67.111	Xiphophorus_couchianus
ENSXETG00000015985	-	98	67.755	ENSXMAG00000013327	pcmtl	98	67.755	Xiphophorus_maculatus
ENSXETG00000015985	-	90	70.222	ENSXMAG00000006249	pcmt	84	70.222	Xiphophorus_maculatus