EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSXETG00000016162 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpc
Alias: -
Full Name: Xenopus tropicalis heterogeneous nuclear ribonucleoprotein C (C1/C2) (hnrnpc)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 13574 bases
Position: chrGL172727.1:1728820-1742393
Accession: NM_001005088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060562	RRM_1	PF00076.22	1.8e-12	1	1
ENSXETP00000035243	RRM_1	PF00076.22	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000035243	-	1225	-	ENSXETP00000035243	283 (aa)	XP_012815611	Q6DET1
ENSXETT00000064648	-	1270	-	ENSXETP00000060562	307 (aa)	-	F6YED6

Gene Model

Click here to download ENSXETG00000016162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000016162	hnrnpc	96	43.793	ENSXETG00000019514	raly	90	46.886
ENSXETG00000016162	hnrnpc	73	57.277	ENSXETG00000017729	ralyl	72	60.748