EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXETG00000016204 (Gene tree)
Gene ID
-
Gene Symbol
rbms1
Alias
-
Full Name
RNA binding motif%2C single stranded interacting protein 1
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Plus strand
Length
67168 bases
Position
chrGL172687.1:1489427-1556594
Accession
XB-GENE-1011124
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000060963RRM_1PF00076.228.5e-2312
ENSXETP00000060963RRM_1PF00076.228.5e-2322
ENSXETP00000035372RRM_1PF00076.228.6e-2312
ENSXETP00000035372RRM_1PF00076.228.6e-2322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000035372-1149-ENSXETP00000035372382 (aa)-F6ZSD9
ENSXETT00000061873-1125-ENSXETP00000060963374 (aa)-F6XIE0
Gene Model
Click here to download ENSXETG00000016204's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016204's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXETG00000016204rbms17467.742ENSXETG00000032055RBMS39967.742
ENSXETG00000016204rbms19469.542ENSXETG00000021787rbms210069.542
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000016204rbms110082.507ENSG00000153250RBMS110082.888Homo_sapiens
ENSXETG00000016204rbms19458.120ENSAPOG00000013761rbms1a9457.337Acanthochromis_polyacanthus
ENSXETG00000016204rbms110073.438ENSAPOG00000024437-9673.438Acanthochromis_polyacanthus
ENSXETG00000016204rbms110081.395ENSAMEG00000012661RBMS19982.171Ailuropoda_melanoleuca
ENSXETG00000016204rbms18157.426ENSACIG00000000113rbms1a8656.740Amphilophus_citrinellus
ENSXETG00000016204rbms110071.540ENSACIG00000021498RBMS19672.063Amphilophus_citrinellus
ENSXETG00000016204rbms110072.135ENSAOCG00000014482-9672.656Amphiprion_ocellaris
ENSXETG00000016204rbms19458.120ENSAOCG00000010066rbms1a9457.337Amphiprion_ocellaris
ENSXETG00000016204rbms19458.120ENSAPEG00000023563rbms1a9457.337Amphiprion_percula
ENSXETG00000016204rbms110071.875ENSAPEG00000018371-9672.396Amphiprion_percula
ENSXETG00000016204rbms19458.120ENSATEG00000015450rbms1a9457.337Anabas_testudineus
ENSXETG00000016204rbms19872.414ENSATEG00000018573RBMS19472.340Anabas_testudineus
ENSXETG00000016204rbms19984.293ENSAPLG00000007282RBMS19685.079Anas_platyrhynchos
ENSXETG00000016204rbms110086.458ENSACAG00000011984RBMS17986.458Anolis_carolinensis
ENSXETG00000016204rbms18783.077ENSANAG00000024424RBMS110083.077Aotus_nancymaae
ENSXETG00000016204rbms19458.120ENSACLG00000021512rbms1a9457.493Astatotilapia_calliptera
ENSXETG00000016204rbms110070.757ENSACLG00000013048RBMS19671.279Astatotilapia_calliptera
ENSXETG00000016204rbms110066.927ENSAMXG00000002146rbms1a9666.927Astyanax_mexicanus
ENSXETG00000016204rbms110072.135ENSAMXG00000009969RBMS110072.995Astyanax_mexicanus
ENSXETG00000016204rbms110083.551ENSBTAG00000005180RBMS19584.334Bos_taurus
ENSXETG00000016204rbms19980.211ENSCJAG00000012871-9980.106Callithrix_jacchus
ENSXETG00000016204rbms110082.245ENSCJAG00000014861-9782.507Callithrix_jacchus
ENSXETG00000016204rbms19776.757ENSCJAG00000022465-9877.023Callithrix_jacchus
ENSXETG00000016204rbms110083.290ENSCAFG00000009922RBMS19584.073Canis_familiaris
ENSXETG00000016204rbms110082.245ENSCAFG00020006120RBMS19483.029Canis_lupus_dingo
ENSXETG00000016204rbms110082.507ENSCHIG00000023380RBMS19483.290Capra_hircus
ENSXETG00000016204rbms110082.768ENSTSYG00000005584RBMS110083.155Carlito_syrichta
ENSXETG00000016204rbms110081.462ENSCPOG00000012310RBMS110079.146Cavia_porcellus
ENSXETG00000016204rbms110082.507ENSCCAG00000033841RBMS19983.290Cebus_capucinus
ENSXETG00000016204rbms110083.029ENSCATG00000043032RBMS110083.155Cercocebus_atys
ENSXETG00000016204rbms110082.507ENSCLAG00000003031RBMS110079.487Chinchilla_lanigera
ENSXETG00000016204rbms110082.768ENSCSAG00000015687RBMS19483.551Chlorocebus_sabaeus
ENSXETG00000016204rbms15089.535ENSCHOG00000001579RBMS16589.535Choloepus_hoffmanni
ENSXETG00000016204rbms19986.053ENSCPBG00000026455RBMS19486.842Chrysemys_picta_bellii
ENSXETG00000016204rbms110082.768ENSCANG00000042152RBMS110083.155Colobus_angolensis_palliatus
ENSXETG00000016204rbms110081.462ENSCGRG00001022833Rbms19482.245Cricetulus_griseus_chok1gshd
ENSXETG00000016204rbms110081.462ENSCGRG00000008824Rbms110079.146Cricetulus_griseus_crigri
ENSXETG00000016204rbms19457.265ENSCSEG00000000889rbms1a9456.522Cynoglossus_semilaevis
ENSXETG00000016204rbms110069.689ENSCSEG00000010652RBMS110070.133Cynoglossus_semilaevis
ENSXETG00000016204rbms19870.889ENSCVAG00000002027RBMS110070.889Cyprinodon_variegatus
ENSXETG00000016204rbms19458.405ENSCVAG00000014698rbms1a9457.609Cyprinodon_variegatus
ENSXETG00000016204rbms110067.273ENSDARG00000074023rbms1a9667.273Danio_rerio
ENSXETG00000016204rbms19581.402ENSDNOG00000040691RBMS110081.026Dasypus_novemcinctus
ENSXETG00000016204rbms110082.768ENSDORG00000007103Rbms19683.551Dipodomys_ordii
ENSXETG00000016204rbms19971.466ENSETEG00000012135RBMS110072.251Echinops_telfairi
ENSXETG00000016204rbms110083.290ENSEASG00005023132RBMS19584.073Equus_asinus_asinus
ENSXETG00000016204rbms110083.029ENSECAG00000019894RBMS19483.812Equus_caballus
ENSXETG00000016204rbms17886.250ENSEEUG00000005628RBMS17390.000Erinaceus_europaeus
ENSXETG00000016204rbms110069.792ENSELUG00000019328RBMS19470.312Esox_lucius
ENSXETG00000016204rbms19562.640ENSELUG00000018923rbms1a10061.765Esox_lucius
ENSXETG00000016204rbms110082.768ENSFCAG00000012524RBMS110083.155Felis_catus
ENSXETG00000016204rbms19585.634ENSFALG00000004440RBMS110085.027Ficedula_albicollis
ENSXETG00000016204rbms19982.984ENSFDAG00000015692RBMS110079.648Fukomys_damarensis
ENSXETG00000016204rbms19458.974ENSFHEG00000005662rbms1a8767.045Fundulus_heteroclitus
ENSXETG00000016204rbms110069.452ENSFHEG00000000720RBMS19669.452Fundulus_heteroclitus
ENSXETG00000016204rbms19055.874ENSGMOG00000000525rbms1a9955.125Gadus_morhua
ENSXETG00000016204rbms110084.334ENSGALG00000011132RBMS110085.829Gallus_gallus
ENSXETG00000016204rbms19458.974ENSGAFG00000011633rbms1a9958.356Gambusia_affinis
ENSXETG00000016204rbms110068.912ENSGAFG00000007708RBMS19669.610Gambusia_affinis
ENSXETG00000016204rbms19456.011ENSGACG00000015174rbms1a9559.012Gasterosteus_aculeatus
ENSXETG00000016204rbms110069.895ENSGACG00000005671RBMS19669.895Gasterosteus_aculeatus
ENSXETG00000016204rbms19986.579ENSGAGG00000007866RBMS19486.579Gopherus_agassizii
ENSXETG00000016204rbms19982.723ENSGGOG00000001264RBMS110082.888Gorilla_gorilla
ENSXETG00000016204rbms110081.462ENSGGOG00000043756-9582.245Gorilla_gorilla
ENSXETG00000016204rbms19458.120ENSHBUG00000004802rbms1a9457.493Haplochromis_burtoni
ENSXETG00000016204rbms19372.346ENSHBUG00000004516RBMS19873.352Haplochromis_burtoni
ENSXETG00000016204rbms110081.201ENSHGLG00000010387RBMS19682.984Heterocephalus_glaber_female
ENSXETG00000016204rbms110081.462ENSHGLG00100014105RBMS110078.894Heterocephalus_glaber_male
ENSXETG00000016204rbms19569.944ENSHCOG00000016668RBMS19468.700Hippocampus_comes
ENSXETG00000016204rbms19457.835ENSHCOG00000020097rbms1a9457.065Hippocampus_comes
ENSXETG00000016204rbms110072.917ENSIPUG00000014677RBMS19672.656Ictalurus_punctatus
ENSXETG00000016204rbms110068.052ENSIPUG00000010131RBMS19668.052Ictalurus_punctatus
ENSXETG00000016204rbms19982.723ENSSTOG00000012501RBMS110079.397Ictidomys_tridecemlineatus
ENSXETG00000016204rbms110081.201ENSJJAG00000016543Rbms110079.231Jaculus_jaculus
ENSXETG00000016204rbms110071.354ENSKMAG00000013911RBMS19671.615Kryptolebias_marmoratus
ENSXETG00000016204rbms19456.980ENSKMAG00000011839-9456.250Kryptolebias_marmoratus
ENSXETG00000016204rbms19572.753ENSLBEG00000005787RBMS19472.149Labrus_bergylta
ENSXETG00000016204rbms19457.835ENSLBEG00000025962rbms1a9457.065Labrus_bergylta
ENSXETG00000016204rbms110077.778ENSLACG00000004324RBMS110078.351Latimeria_chalumnae
ENSXETG00000016204rbms110079.167ENSLOCG00000008622rbms1a9679.688Lepisosteus_oculatus
ENSXETG00000016204rbms110081.984ENSLAFG00000017217RBMS110082.768Loxodonta_africana
ENSXETG00000016204rbms110083.029ENSMFAG00000000274RBMS110083.155Macaca_fascicularis
ENSXETG00000016204rbms110082.768ENSMMUG00000016825RBMS19983.551Macaca_mulatta
ENSXETG00000016204rbms110082.768ENSMNEG00000039425RBMS110083.155Macaca_nemestrina
ENSXETG00000016204rbms110082.768ENSMLEG00000031517RBMS110082.888Mandrillus_leucophaeus
ENSXETG00000016204rbms19571.629ENSMAMG00000003159-9970.235Mastacembelus_armatus
ENSXETG00000016204rbms19456.125ENSMAMG00000005018rbms1a9455.435Mastacembelus_armatus
ENSXETG00000016204rbms19458.120ENSMZEG00005005661rbms1a9457.493Maylandia_zebra
ENSXETG00000016204rbms18973.414ENSMZEG00005007313RBMS19772.779Maylandia_zebra
ENSXETG00000016204rbms19586.479ENSMGAG00000011054RBMS110085.829Meleagris_gallopavo
ENSXETG00000016204rbms110081.201ENSMAUG00000008550Rbms19481.984Mesocricetus_auratus
ENSXETG00000016204rbms110082.768ENSMICG00000008325RBMS110083.551Microcebus_murinus
ENSXETG00000016204rbms110080.418ENSMOCG00000022617Rbms110078.205Microtus_ochrogaster
ENSXETG00000016204rbms110070.390ENSMMOG00000003707RBMS19671.169Mola_mola
ENSXETG00000016204rbms18161.513ENSMMOG00000018249rbms1a8660.436Mola_mola
ENSXETG00000016204rbms110084.595ENSMODG00000005250RBMS19485.379Monodelphis_domestica
ENSXETG00000016204rbms19073.964ENSMALG00000015715-9372.554Monopterus_albus
ENSXETG00000016204rbms19457.265ENSMALG00000014235rbms1a9456.522Monopterus_albus
ENSXETG00000016204rbms110080.418MGP_CAROLIEiJ_G0023586Rbms110078.205Mus_caroli
ENSXETG00000016204rbms110080.679ENSMUSG00000026970Rbms110078.462Mus_musculus
ENSXETG00000016204rbms110080.418MGP_PahariEiJ_G0025037Rbms19581.201Mus_pahari
ENSXETG00000016204rbms110080.679MGP_SPRETEiJ_G0024508Rbms110078.462Mus_spretus
ENSXETG00000016204rbms110078.446ENSMPUG00000000539RBMS19479.198Mustela_putorius_furo
ENSXETG00000016204rbms110077.805ENSMLUG00000008762RBMS19578.554Myotis_lucifugus
ENSXETG00000016204rbms110081.201ENSNGAG00000013636Rbms19481.984Nannospalax_galili
ENSXETG00000016204rbms18259.804ENSNBRG00000020217rbms1a9059.006Neolamprologus_brichardi
ENSXETG00000016204rbms19569.382ENSNBRG00000015151RBMS110068.984Neolamprologus_brichardi
ENSXETG00000016204rbms110082.507ENSNLEG00000001667RBMS110082.888Nomascus_leucogenys
ENSXETG00000016204rbms18772.923ENSMEUG00000000746RBMS110072.923Notamacropus_eugenii
ENSXETG00000016204rbms110075.718ENSOPRG00000012431RBMS19476.501Ochotona_princeps
ENSXETG00000016204rbms110081.723ENSODEG00000013934RBMS110079.487Octodon_degus
ENSXETG00000016204rbms110071.279ENSONIG00000008934RBMS19671.802Oreochromis_niloticus
ENSXETG00000016204rbms19458.405ENSONIG00000003329rbms1a9357.724Oreochromis_niloticus
ENSXETG00000016204rbms15949.593ENSOANG00000004477-9950.202Ornithorhynchus_anatinus
ENSXETG00000016204rbms19986.649ENSOANG00000006166RBMS19687.435Ornithorhynchus_anatinus
ENSXETG00000016204rbms110081.723ENSOCUG00000017365RBMS18982.507Oryctolagus_cuniculus
ENSXETG00000016204rbms19456.410ENSORLG00000003917rbms1a9555.707Oryzias_latipes
ENSXETG00000016204rbms19072.566ENSORLG00000016818RBMS19470.449Oryzias_latipes
ENSXETG00000016204rbms19072.271ENSORLG00020022335RBMS19470.185Oryzias_latipes_hni
ENSXETG00000016204rbms19456.125ENSORLG00020018663rbms1a9555.435Oryzias_latipes_hni
ENSXETG00000016204rbms19456.410ENSORLG00015016556rbms1a9555.707Oryzias_latipes_hsok
ENSXETG00000016204rbms19072.861ENSORLG00015018208RBMS19470.712Oryzias_latipes_hsok
ENSXETG00000016204rbms19570.166ENSOMEG00000002394RBMS19570.942Oryzias_melastigma
ENSXETG00000016204rbms19583.193ENSOGAG00000002900RBMS110082.713Otolemur_garnettii
ENSXETG00000016204rbms110082.507ENSOARG00000006870RBMS110079.847Ovis_aries
ENSXETG00000016204rbms110082.768ENSPPAG00000040083RBMS110083.551Pan_paniscus
ENSXETG00000016204rbms19580.563ENSPPAG00000036520-9980.106Pan_paniscus
ENSXETG00000016204rbms110082.768ENSPPRG00000005040RBMS110083.155Panthera_pardus
ENSXETG00000016204rbms19982.984ENSPTIG00000021240RBMS110083.155Panthera_tigris_altaica
ENSXETG00000016204rbms110080.157ENSPTRG00000039358-9980.940Pan_troglodytes
ENSXETG00000016204rbms110082.768ENSPTRG00000052304RBMS110083.551Pan_troglodytes
ENSXETG00000016204rbms110083.029ENSPANG00000001383RBMS19983.551Papio_anubis
ENSXETG00000016204rbms19575.070ENSPKIG00000012818rbms1a9672.727Paramormyrops_kingsleyae
ENSXETG00000016204rbms19874.142ENSPKIG00000001498rbms1a9474.142Paramormyrops_kingsleyae
ENSXETG00000016204rbms19985.000ENSPSIG00000010240RBMS19385.789Pelodiscus_sinensis
ENSXETG00000016204rbms19453.846ENSPMGG00000004341rbms1a9453.134Periophthalmus_magnuspinnatus
ENSXETG00000016204rbms18971.601ENSPMGG00000006310RBMS110063.612Periophthalmus_magnuspinnatus
ENSXETG00000016204rbms110081.201ENSPEMG00000009449Rbms19782.984Peromyscus_maniculatus_bairdii
ENSXETG00000016204rbms110084.856ENSPCIG00000018405RBMS19585.640Phascolarctos_cinereus
ENSXETG00000016204rbms19571.268ENSPFOG00000017483RBMS19470.292Poecilia_formosa
ENSXETG00000016204rbms19458.974ENSPFOG00000016116rbms1a9458.152Poecilia_formosa
ENSXETG00000016204rbms19458.974ENSPLAG00000013864rbms1a9458.152Poecilia_latipinna
ENSXETG00000016204rbms19571.549ENSPLAG00000000920RBMS19470.292Poecilia_latipinna
ENSXETG00000016204rbms19458.974ENSPMEG00000016185rbms1a9458.152Poecilia_mexicana
ENSXETG00000016204rbms19571.268ENSPMEG00000015838RBMS19470.292Poecilia_mexicana
ENSXETG00000016204rbms19458.974ENSPREG00000020161rbms1a9458.152Poecilia_reticulata
ENSXETG00000016204rbms19571.549ENSPREG00000008146RBMS19470.822Poecilia_reticulata
ENSXETG00000016204rbms110079.198ENSPPYG00000012879-9479.950Pongo_abelii
ENSXETG00000016204rbms110077.023ENSPCAG00000009673RBMS19477.807Procavia_capensis
ENSXETG00000016204rbms110082.507ENSPCOG00000027294RBMS110082.888Propithecus_coquereli
ENSXETG00000016204rbms110070.757ENSPVAG00000010429RBMS19471.540Pteropus_vampyrus
ENSXETG00000016204rbms110071.279ENSPNYG00000002643RBMS19671.802Pundamilia_nyererei
ENSXETG00000016204rbms110073.438ENSPNAG00000023479RBMS19673.438Pygocentrus_nattereri
ENSXETG00000016204rbms19967.969ENSPNAG00000010225rbms1a9667.969Pygocentrus_nattereri
ENSXETG00000016204rbms110080.679ENSRNOG00000008482Rbms19878.446Rattus_norvegicus
ENSXETG00000016204rbms110082.507ENSRBIG00000044262RBMS19983.073Rhinopithecus_bieti
ENSXETG00000016204rbms110083.029ENSRROG00000043108RBMS19983.551Rhinopithecus_roxellana
ENSXETG00000016204rbms19980.155ENSSBOG00000034705RBMS110083.422Saimiri_boliviensis_boliviensis
ENSXETG00000016204rbms110084.334ENSSHAG00000012271RBMS110079.885Sarcophilus_harrisii
ENSXETG00000016204rbms19577.684ENSSFOG00015022929rbms19575.393Scleropages_formosus
ENSXETG00000016204rbms19573.803ENSSFOG00015014493rbms1a10072.000Scleropages_formosus
ENSXETG00000016204rbms19457.550ENSSMAG00000012722rbms1a9956.986Scophthalmus_maximus
ENSXETG00000016204rbms19571.629ENSSMAG00000012152RBMS19471.388Scophthalmus_maximus
ENSXETG00000016204rbms110071.615ENSSDUG00000018803RBMS19672.251Seriola_dumerili
ENSXETG00000016204rbms19458.120ENSSDUG00000020602rbms1a9957.534Seriola_dumerili
ENSXETG00000016204rbms19458.120ENSSLDG00000009495rbms1a9457.337Seriola_lalandi_dorsalis
ENSXETG00000016204rbms110071.354ENSSLDG00000016556RBMS19671.875Seriola_lalandi_dorsalis
ENSXETG00000016204rbms110055.091ENSSARG00000011085RBMS19455.875Sorex_araneus
ENSXETG00000016204rbms19587.042ENSSPUG00000017163RBMS110086.898Sphenodon_punctatus
ENSXETG00000016204rbms110072.135ENSSPAG00000000059RBMS110070.976Stegastes_partitus
ENSXETG00000016204rbms19457.835ENSSPAG00000005371rbms1a9457.065Stegastes_partitus
ENSXETG00000016204rbms19584.507ENSSSCG00000015888RBMS19583.551Sus_scrofa
ENSXETG00000016204rbms110084.073ENSTGUG00000006606RBMS19484.856Taeniopygia_guttata
ENSXETG00000016204rbms19356.897ENSTRUG00000017155rbms1a9455.707Takifugu_rubripes
ENSXETG00000016204rbms19571.429ENSTRUG00000005466-9669.689Takifugu_rubripes
ENSXETG00000016204rbms19973.713ENSTNIG00000016496RBMS110073.713Tetraodon_nigroviridis
ENSXETG00000016204rbms19058.631ENSTNIG00000009477rbms1a10055.623Tetraodon_nigroviridis
ENSXETG00000016204rbms19973.298ENSTBEG00000016156RBMS110074.084Tupaia_belangeri
ENSXETG00000016204rbms19983.508ENSTTRG00000011058RBMS110084.293Tursiops_truncatus
ENSXETG00000016204rbms19982.368ENSUAMG00000022331RBMS19483.158Ursus_americanus
ENSXETG00000016204rbms110082.245ENSUMAG00000008605RBMS19883.029Ursus_maritimus
ENSXETG00000016204rbms19382.961ENSVPAG00000002716RBMS19483.799Vicugna_pacos
ENSXETG00000016204rbms110078.947ENSVVUG00000018682RBMS110083.422Vulpes_vulpes
ENSXETG00000016204rbms19455.840ENSXCOG00000001659rbms1a9455.163Xiphophorus_couchianus
ENSXETG00000016204rbms19570.704ENSXCOG00000000211RBMS110069.786Xiphophorus_couchianus
ENSXETG00000016204rbms19570.986ENSXMAG00000011405RBMS110066.578Xiphophorus_maculatus
ENSXETG00000016204rbms19458.974ENSXMAG00000001802rbms1a9458.152Xiphophorus_maculatus

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